| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is ytrH [H]
Identifier: 170755468
GI number: 170755468
Start: 1406860
End: 1407198
Strand: Direct
Name: ytrH [H]
Synonym: CLD_3292
Alternate gene names: 170755468
Gene position: 1406860-1407198 (Clockwise)
Preceding gene: 170754238
Following gene: 170756972
Centisome position: 35.54
GC content: 32.74
Gene sequence:
>339_bases ATGAAGGGATTTTTAGGAAATTTAGTATATAGTTTTATGGTATCCTTTGGAGTAATAATAGGAGCAAGTACTTTTTCAGG CATTGCTGCAATCTTATTAAATCATCCTCCTTTAAAAATCATGTCGGATCTCTCTAATTCTATAAAAATATGGGCAGTAG CTACAGCTTTAGGGGGAACATTTTCCTCTTTTTCTATTTTGGAAGAAGGAATATTTAAAGGGGAGTTAAGAGGGATGCTA AAACAAATATTTTATATTCTTGCCTCCCTAATAGGTGCCAACTTAGCGGTAAATAGCATAGAACTTTTACAAAAATGGGG AGAATATTTCAATAGATGA
Upstream 100 bases:
>100_bases GTAAAAAACAAATTATTTATGTAATAGCATATAGGTGAATAAAAAATAATACTAAATCATAAATTTATAAAGATATATAA TGCTTTTATAGGTGAATTTT
Downstream 100 bases:
>100_bases ATAAAGAAAATAAATATTTTTTTTCTTTCTGTGTAGGGTTAGTTATAGGAGGGGCAGTAGGCATAATTTTCTTTAGTTTG TTTATAAGTTATAGGATAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MKGFLGNLVYSFMVSFGVIIGASTFSGIAAILLNHPPLKIMSDLSNSIKIWAVATALGGTFSSFSILEEGIFKGELRGML KQIFYILASLIGANLAVNSIELLQKWGEYFNR
Sequences:
>Translated_112_residues MKGFLGNLVYSFMVSFGVIIGASTFSGIAAILLNHPPLKIMSDLSNSIKIWAVATALGGTFSSFSILEEGIFKGELRGML KQIFYILASLIGANLAVNSIELLQKWGEYFNR >Mature_112_residues MKGFLGNLVYSFMVSFGVIIGASTFSGIAAILLNHPPLKIMSDLSNSIKIWAVATALGGTFSSFSILEEGIFKGELRGML KQIFYILASLIGANLAVNSIELLQKWGEYFNR
Specific function: Involved in sporulation. May contribute to cortex formation or stability [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Forespore outer membrane; Multi-pass membrane protein (Potential). Note=Shortly after the initiation of the engulfment, is localized to the sporulation septum. During later stages of sporulation, remains associated with the forespore outer membrane [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12181; Mature: 12181
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGFLGNLVYSFMVSFGVIIGASTFSGIAAILLNHPPLKIMSDLSNSIKIWAVATALGGT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHCCC FSSFSILEEGIFKGELRGMLKQIFYILASLIGANLAVNSIELLQKWGEYFNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKGFLGNLVYSFMVSFGVIIGASTFSGIAAILLNHPPLKIMSDLSNSIKIWAVATALGGT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHCCC FSSFSILEEGIFKGELRGMLKQIFYILASLIGANLAVNSIELLQKWGEYFNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377; 12662922 [H]