Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is cotS

Identifier: 170755418

GI number: 170755418

Start: 150152

End: 151156

Strand: Direct

Name: cotS

Synonym: CLD_0672

Alternate gene names: 170755418

Gene position: 150152-151156 (Clockwise)

Preceding gene: 170757561

Following gene: 170754325

Centisome position: 3.79

GC content: 26.37

Gene sequence:

>1005_bases
ATGATGAGAGAATTTGAAATTGAAAGACAGTTTAATATTAAAATTGAAAAACTTAAACCTCATAGAGGAGTGTATCATTT
AAAAACCAACGAAGGAGATAGATGTTTAAAAAAAATTAATTATGGGGTACAAAAATTATTATTTGTTTCTGGTGCTAAAG
AACATCTTATGAAGAATGGCTTTGACTATGTGGACAATTATTTTTTAAATCTAAATGAGGAACCCTATGCACTTGTAAAC
GAAGATATATATACTTTGTCAGAATGGATAGAAGGGAGAGAATGCAATTTTAGGGACAAAGAAGATCTTATATTAGCAGC
TAGGGCATTAGCTTATCTTCATATAGCATCAAAAGGATATGAACCTCCAGAGAATAGTAAGCTTAAAACAGATTTAGGTA
GATGGCCAAACTTAATGAAGAAAAGAGTTAGATCTTTAGATAAGATGAGAGAAATGATAAGAAAGAATAATAATAAAACG
GATTTTGATTTAAGTTATATAAAGAACATAGAATTTTACAAGGAGTTAGGTAAGAGATCCATGAAAGTTCTAGAGGATTC
AGCTTATATGGAAATATGTAAAAAAACTGAGGAAGAGAAAAGCTTTTGTCATCATGATTATACTTATCATAATATAATAA
TAGATAAAAATAATACTATTAATGTTATAGATTTTGATTATTGTAAAAGAGAAATAAAAACCTATGATATTTCTAATTTT
ATGATAAAGGTTTTAAAAAGAGTAGATTGGAATATAGAATATGCAGAACTTATATTAAATTCTTATACAGCCATAAATCC
ATTAAAAGAGGAAGAGTATAGAACTTTATTTGCATTTTTATTATTCCCACAAAGGTTTTGGAGATTAAGCAACAGATATT
ATTACAATGAAGTTACGTGGCCATCAAACACTTTTAATAAGAAGATGGAGGAATTGATTTCTGAAAAAGATAAATATATT
AATTTTATTGAAGAATTTAAAAAAATATATTCACAAAAAGAATAA

Upstream 100 bases:

>100_bases
TAATTCATCATAATTCATTATATTAATTTAAAGAGAAAAGTGTTAAATTACTTCTAAAACTATAATAATATACATATAGT
TTTAATAGAGGTGGTTAACT

Downstream 100 bases:

>100_bases
TGAATACATTAAGGCATATGAAGCTTATGTAGTTTTATATGCCTTAAATAGTTTTATTAACAAATTTATTATAAGTATCA
TAGTATATAGGGTGATTGAT

Product: spore coat protein CotS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MMREFEIERQFNIKIEKLKPHRGVYHLKTNEGDRCLKKINYGVQKLLFVSGAKEHLMKNGFDYVDNYFLNLNEEPYALVN
EDIYTLSEWIEGRECNFRDKEDLILAARALAYLHIASKGYEPPENSKLKTDLGRWPNLMKKRVRSLDKMREMIRKNNNKT
DFDLSYIKNIEFYKELGKRSMKVLEDSAYMEICKKTEEEKSFCHHDYTYHNIIIDKNNTINVIDFDYCKREIKTYDISNF
MIKVLKRVDWNIEYAELILNSYTAINPLKEEEYRTLFAFLLFPQRFWRLSNRYYYNEVTWPSNTFNKKMEELISEKDKYI
NFIEEFKKIYSQKE

Sequences:

>Translated_334_residues
MMREFEIERQFNIKIEKLKPHRGVYHLKTNEGDRCLKKINYGVQKLLFVSGAKEHLMKNGFDYVDNYFLNLNEEPYALVN
EDIYTLSEWIEGRECNFRDKEDLILAARALAYLHIASKGYEPPENSKLKTDLGRWPNLMKKRVRSLDKMREMIRKNNNKT
DFDLSYIKNIEFYKELGKRSMKVLEDSAYMEICKKTEEEKSFCHHDYTYHNIIIDKNNTINVIDFDYCKREIKTYDISNF
MIKVLKRVDWNIEYAELILNSYTAINPLKEEEYRTLFAFLLFPQRFWRLSNRYYYNEVTWPSNTFNKKMEELISEKDKYI
NFIEEFKKIYSQKE
>Mature_334_residues
MMREFEIERQFNIKIEKLKPHRGVYHLKTNEGDRCLKKINYGVQKLLFVSGAKEHLMKNGFDYVDNYFLNLNEEPYALVN
EDIYTLSEWIEGRECNFRDKEDLILAARALAYLHIASKGYEPPENSKLKTDLGRWPNLMKKRVRSLDKMREMIRKNNNKT
DFDLSYIKNIEFYKELGKRSMKVLEDSAYMEICKKTEEEKSFCHHDYTYHNIIIDKNNTINVIDFDYCKREIKTYDISNF
MIKVLKRVDWNIEYAELILNSYTAINPLKEEEYRTLFAFLLFPQRFWRLSNRYYYNEVTWPSNTFNKKMEELISEKDKYI
NFIEEFKKIYSQKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Spore wall, spore coat [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CotS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009
- InterPro:   IPR014255 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 40537; Mature: 40537

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: PS00109 PROTEIN_KINASE_TYR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMREFEIERQFNIKIEKLKPHRGVYHLKTNEGDRCLKKINYGVQKLLFVSGAKEHLMKNG
CCCCCCCCCEECEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
FDYVDNYFLNLNEEPYALVNEDIYTLSEWIEGRECNFRDKEDLILAARALAYLHIASKGY
HHHHCCCEECCCCCCCEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
EPPENSKLKTDLGRWPNLMKKRVRSLDKMREMIRKNNNKTDFDLSYIKNIEFYKELGKRS
CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
MKVLEDSAYMEICKKTEEEKSFCHHDYTYHNIIIDKNNTINVIDFDYCKREIKTYDISNF
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEHHHHHHHHHHCCHHHH
MIKVLKRVDWNIEYAELILNSYTAINPLKEEEYRTLFAFLLFPQRFWRLSNRYYYNEVTW
HHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
PSNTFNKKMEELISEKDKYINFIEEFKKIYSQKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMREFEIERQFNIKIEKLKPHRGVYHLKTNEGDRCLKKINYGVQKLLFVSGAKEHLMKNG
CCCCCCCCCEECEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
FDYVDNYFLNLNEEPYALVNEDIYTLSEWIEGRECNFRDKEDLILAARALAYLHIASKGY
HHHHCCCEECCCCCCCEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
EPPENSKLKTDLGRWPNLMKKRVRSLDKMREMIRKNNNKTDFDLSYIKNIEFYKELGKRS
CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
MKVLEDSAYMEICKKTEEEKSFCHHDYTYHNIIIDKNNTINVIDFDYCKREIKTYDISNF
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEHHHHHHHHHHCCHHHH
MIKVLKRVDWNIEYAELILNSYTAINPLKEEEYRTLFAFLLFPQRFWRLSNRYYYNEVTW
HHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
PSNTFNKKMEELISEKDKYINFIEEFKKIYSQKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7545510; 9387221; 9384377 [H]