| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is cotI [H]
Identifier: 170757561
GI number: 170757561
Start: 147541
End: 148554
Strand: Direct
Name: cotI [H]
Synonym: CLD_0674
Alternate gene names: 170757561
Gene position: 147541-148554 (Clockwise)
Preceding gene: 170755700
Following gene: 170755418
Centisome position: 3.73
GC content: 21.79
Gene sequence:
>1014_bases ATGGATAAGCTAAATAAAAATTATCTTAAAAAATATAATTTATCTTTAGATTTATTTAATCAATATGATTTTATTATAAA AGACATTTATCCTATTAGAAATGTTTATATTATAGATACAAATAAAGGTAAAAAAATATTAAAAAAAGTTAATTATACTG TAGAGGAATTAAAATTTATAGAAGAAATAATAGATTATATAAAAATTGGATTTAGGAGAATAATGGACTTTGAAAGGAAC ATACAAGGAGAGGTATATACTATATATAAAGGTGAAATGTATTGTGTAATGGATTTAATTGATGGACGAGAATGTCAATT TAGTAATCCCTTAGACTTAAAGATTTCCTCTGTAGCTTTAGCCCAAATGCATAAAGCATCAAAAGGATTTACAACAAACT TTAATAAAAGGGCTTTAAATGGGAAATCTATAGAAAAATTTAAGATACAAAAAGAGGAAATGAATTTTTTTAAAAAAATA GCTAATATCCATAAAAATAAGAATGAATTTGATAATTTATTCTTATCAGAAGTAGATTACTATATAGATGAGATAAGTAA AAGTATAAATATATTAGAGAATAGTGATTATTATGATATATGTAAAGAAAGTGACAAAATATCTATTTGTCATCATGATT TAGCCTACCATAATATATTGATTAGAGAAGATGAAGCTTATTTTATAGATTTTGATTATGCTATTTTAGATTTAAAGGCT AATGATTTGTGTAACTTTATAACAAAGGTTATAAAAAATTTCGCTTTTGATATTAATAAGGCAAATATTATTTTGAATAG CTATTCTAGCATATATAGTATAACGGATAAAGAATTAGAAGTATTATATGGCTTATTAAGCTTCCCATATGACTTTTATG ATATATCTAAAAATTATTATACAAAACGAAAAGATTGGGAGGATGAAGTGTTTTTAAATAGGTTAATAAAAAAATGTAAT TATAAGGAAGATAGAGAGGAATTTTTAAAAAACTTTAAAGATAATATATTATAA
Upstream 100 bases:
>100_bases TATGCAAGAAAAAGATTTAAATAAAGAAAAGCACTATATGGATAGATTTAATAAGGCTATGAAGTTAGATTCTAATAGCT TTGTTTAAAGGGGTGATTAA
Downstream 100 bases:
>100_bases TAAGAGTTATAAACAGAGTTCTAAGCTTCAGAGGGAGTTTTTACTCCCTCTGAAGCTTATTAACAGACTTCTAGGAGTTT TACTCCTTAGAAGTCGTTAT
Product: putative spore coat protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MDKLNKNYLKKYNLSLDLFNQYDFIIKDIYPIRNVYIIDTNKGKKILKKVNYTVEELKFIEEIIDYIKIGFRRIMDFERN IQGEVYTIYKGEMYCVMDLIDGRECQFSNPLDLKISSVALAQMHKASKGFTTNFNKRALNGKSIEKFKIQKEEMNFFKKI ANIHKNKNEFDNLFLSEVDYYIDEISKSINILENSDYYDICKESDKISICHHDLAYHNILIREDEAYFIDFDYAILDLKA NDLCNFITKVIKNFAFDINKANIILNSYSSIYSITDKELEVLYGLLSFPYDFYDISKNYYTKRKDWEDEVFLNRLIKKCN YKEDREEFLKNFKDNIL
Sequences:
>Translated_337_residues MDKLNKNYLKKYNLSLDLFNQYDFIIKDIYPIRNVYIIDTNKGKKILKKVNYTVEELKFIEEIIDYIKIGFRRIMDFERN IQGEVYTIYKGEMYCVMDLIDGRECQFSNPLDLKISSVALAQMHKASKGFTTNFNKRALNGKSIEKFKIQKEEMNFFKKI ANIHKNKNEFDNLFLSEVDYYIDEISKSINILENSDYYDICKESDKISICHHDLAYHNILIREDEAYFIDFDYAILDLKA NDLCNFITKVIKNFAFDINKANIILNSYSSIYSITDKELEVLYGLLSFPYDFYDISKNYYTKRKDWEDEVFLNRLIKKCN YKEDREEFLKNFKDNIL >Mature_337_residues MDKLNKNYLKKYNLSLDLFNQYDFIIKDIYPIRNVYIIDTNKGKKILKKVNYTVEELKFIEEIIDYIKIGFRRIMDFERN IQGEVYTIYKGEMYCVMDLIDGRECQFSNPLDLKISSVALAQMHKASKGFTTNFNKRALNGKSIEKFKIQKEEMNFFKKI ANIHKNKNEFDNLFLSEVDYYIDEISKSINILENSDYYDICKESDKISICHHDLAYHNILIREDEAYFIDFDYAILDLKA NDLCNFITKVIKNFAFDINKANIILNSYSSIYSITDKELEVLYGLLSFPYDFYDISKNYYTKRKDWEDEVFLNRLIKKCN YKEDREEFLKNFKDNIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Spore wall, spore coat [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CotS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR011009 - InterPro: IPR014255 [H]
Pfam domain/function: PF01636 APH [H]
EC number: NA
Molecular weight: Translated: 40368; Mature: 40368
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKLNKNYLKKYNLSLDLFNQYDFIIKDIYPIRNVYIIDTNKGKKILKKVNYTVEELKFI CCCCCHHHHHHHCCCEEECCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCHHHHHHHH EEIIDYIKIGFRRIMDFERNIQGEVYTIYKGEMYCVMDLIDGRECQFSNPLDLKISSVAL HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCEEEHHHHH AQMHKASKGFTTNFNKRALNGKSIEKFKIQKEEMNFFKKIANIHKNKNEFDNLFLSEVDY HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH YIDEISKSINILENSDYYDICKESDKISICHHDLAYHNILIREDEAYFIDFDYAILDLKA HHHHHHHHHHEECCCCHHHHHCCCCCEEEEEHHHHHHEEEEECCCEEEEEECEEEEEECH NDLCNFITKVIKNFAFDINKANIILNSYSSIYSITDKELEVLYGLLSFPYDFYDISKNYY HHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCHHHHHHHHHHHHCCHHHHHCCCCCC TKRKDWEDEVFLNRLIKKCNYKEDREEFLKNFKDNIL CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MDKLNKNYLKKYNLSLDLFNQYDFIIKDIYPIRNVYIIDTNKGKKILKKVNYTVEELKFI CCCCCHHHHHHHCCCEEECCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCHHHHHHHH EEIIDYIKIGFRRIMDFERNIQGEVYTIYKGEMYCVMDLIDGRECQFSNPLDLKISSVAL HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCEEEHHHHH AQMHKASKGFTTNFNKRALNGKSIEKFKIQKEEMNFFKKIANIHKNKNEFDNLFLSEVDY HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH YIDEISKSINILENSDYYDICKESDKISICHHDLAYHNILIREDEAYFIDFDYAILDLKA HHHHHHHHHHEECCCCHHHHHCCCCCEEEEEHHHHHHEEEEECCCEEEEEECEEEEEECH NDLCNFITKVIKNFAFDINKANIILNSYSSIYSITDKELEVLYGLLSFPYDFYDISKNYY HHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCHHHHHHHHHHHHCCHHHHHCCCCCC TKRKDWEDEVFLNRLIKKCNYKEDREEFLKNFKDNIL CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7545510; 9387221; 9384377 [H]