| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755215
Identifier: 170755215
GI number: 170755215
Start: 483461
End: 484972
Strand: Direct
Name: 170755215
Synonym: CLD_0366
Alternate gene names: NA
Gene position: 483461-484972 (Clockwise)
Preceding gene: 170756809
Following gene: 170757827
Centisome position: 12.21
GC content: 27.12
Gene sequence:
>1512_bases ATGAAAAAAGCAAGACAAATTTTATATTTAATTATACTTATATTTTCCCTAAATGTTAGTAACGTTTTAGCAGCGGATAA TATAAAAAAATATCCAGCACCGGATGTGGAAAAGCGTTCCTATTCCACAACGGTAACATATAATAAGTATCTCTATGATA ATATCTTAAATGGACTTATAAACTTAAAAGATAAGGTAGATACATCTGCTTATTCTAAAAATGCGGATGAGGTTTTTAAG GTTTTAGAAAAAGTTTTAGATGATCATCCAGAAATATTTTATTTTGATTATGAAAACTGTTCCTTTTGGAGCAATGGAAT ATTAGAATTAGGATATAGAGGGAATAAAGAAACAATAAATACTATGAGACAACAATTGGATACTAAGGTACAATCCATAA TAAATAATGTGATAACTAAAGATATGTCTGAACTTGAAAAGGAAATGGCCATTCATGATTATATAGTTTTAAATACTAAA TATGATGAAGAGGCCTTAAATGGAAATATTAGTTCAGAGTTAATTTTTACTTCTTATGGATGTCTTGTAAATAACTTTGC TGTATGTGATGGATATGCCAAGGCTATGCAACTTCTATTAAATAAAGTAGGGGTTTATACTATAAGGGTAACTGGAGATG GTAATGGTGTTAGCCATGCTTGGAATATAGTAAGAATAAATGGTAAAAACTATCAAGTAGATGCTACTTGGAATGATCCA GTACCAGATAGCGGTTATGTTCGTTATAAATATTTTAATATGTCAGATGCAGATATTGCAAAGGATCATCACTGGGTAAA ATCTGATTTTCCTGCTTGTAATGACAATTCTTTTAAATATTTACACAAAGCGGATTATGTAGTTAAAGATTTAGATTATA TTTATTATAGTAATAATGAAGATGATTATAATCTTTATAAAATCAAGATAGATGGAAGTAATAATCAAATGCTTACAGAG GATAGAGCTGTAAATTTAGTTTACTACAATGATTATATATATTTTAGTAATTATTCAGATGGAGGAACTTTATATAAAGT AAAGAATGATGGTACAGAATTAGAACAAATTTTGGACAATCATGTAGAAAATCTACATTATTCAAATGGGTACTTAACCT ATCATAATGAGGATCTTTCTAAAGATGATAGAATGAAATTGGAACAAATAGTCTATGAAGTAGAAAATAAAGAAAAGTTT AATGAATTTTTTTCTTCCTATAAAGACTGGGGACAAGCAAAAGAAGTTCCACGCAATAAGATTTGGAAGATTAGTTTTAA TAGAGCTGTAAATTCAGAGAATTTGAAAGATCAAGTTTATGTAATGAATAGTTCTTTTAATAAAGTAACAGATGTAGATG TAAATATTAATGAAGGTAAAAATATAATAATAACTAAAAAAACGCCATATAAAAGAGGTGGATTATATTATTTAGTTATA AGTAAACCTATTAAGGATATTAAAGGAAAGGAAATAAAAGAACCGGTTGTAATGAAATTTAAAATATATTAA
Upstream 100 bases:
>100_bases AAATAAAATATATTTTATTTAAATCTAATAAAAATTAAATAAAAGATTAGTGTATAAAATCTAAAAATTAGGTTTTGTAT ATTTAAGTGAGGGTAGATTT
Downstream 100 bases:
>100_bases ATTTAAAACATTAATATTTAAATAAAATAATATAGATATAGGATTTATAGTTTATAAGACTATTTATTCTATATCTTTTT TATTTAATATTTATATTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Transglutaminase/Protease; S-Layer Protein; Transglutaminase Domain Protein; Transglutaminase-Like Superfamily Protein; S-Layer Domain-Containing Protein; Ig Domain-Containing Domain-Containing Protein; Protease; Lipoprotein; S-Layer Domain Protein; S-Layer-Like Domain-Containing Protein; Transglutaminase-Like Protease; Bacterial Ig-Like Domain; Copper Amine Oxidase Domain Protein; Murein Endopeptidase; Protein Involved In Cytokinesis Contains TGc Domain; Ig Domain-Containing Protein; Exported Protein
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MKKARQILYLIILIFSLNVSNVLAADNIKKYPAPDVEKRSYSTTVTYNKYLYDNILNGLINLKDKVDTSAYSKNADEVFK VLEKVLDDHPEIFYFDYENCSFWSNGILELGYRGNKETINTMRQQLDTKVQSIINNVITKDMSELEKEMAIHDYIVLNTK YDEEALNGNISSELIFTSYGCLVNNFAVCDGYAKAMQLLLNKVGVYTIRVTGDGNGVSHAWNIVRINGKNYQVDATWNDP VPDSGYVRYKYFNMSDADIAKDHHWVKSDFPACNDNSFKYLHKADYVVKDLDYIYYSNNEDDYNLYKIKIDGSNNQMLTE DRAVNLVYYNDYIYFSNYSDGGTLYKVKNDGTELEQILDNHVENLHYSNGYLTYHNEDLSKDDRMKLEQIVYEVENKEKF NEFFSSYKDWGQAKEVPRNKIWKISFNRAVNSENLKDQVYVMNSSFNKVTDVDVNINEGKNIIITKKTPYKRGGLYYLVI SKPIKDIKGKEIKEPVVMKFKIY
Sequences:
>Translated_503_residues MKKARQILYLIILIFSLNVSNVLAADNIKKYPAPDVEKRSYSTTVTYNKYLYDNILNGLINLKDKVDTSAYSKNADEVFK VLEKVLDDHPEIFYFDYENCSFWSNGILELGYRGNKETINTMRQQLDTKVQSIINNVITKDMSELEKEMAIHDYIVLNTK YDEEALNGNISSELIFTSYGCLVNNFAVCDGYAKAMQLLLNKVGVYTIRVTGDGNGVSHAWNIVRINGKNYQVDATWNDP VPDSGYVRYKYFNMSDADIAKDHHWVKSDFPACNDNSFKYLHKADYVVKDLDYIYYSNNEDDYNLYKIKIDGSNNQMLTE DRAVNLVYYNDYIYFSNYSDGGTLYKVKNDGTELEQILDNHVENLHYSNGYLTYHNEDLSKDDRMKLEQIVYEVENKEKF NEFFSSYKDWGQAKEVPRNKIWKISFNRAVNSENLKDQVYVMNSSFNKVTDVDVNINEGKNIIITKKTPYKRGGLYYLVI SKPIKDIKGKEIKEPVVMKFKIY >Mature_503_residues MKKARQILYLIILIFSLNVSNVLAADNIKKYPAPDVEKRSYSTTVTYNKYLYDNILNGLINLKDKVDTSAYSKNADEVFK VLEKVLDDHPEIFYFDYENCSFWSNGILELGYRGNKETINTMRQQLDTKVQSIINNVITKDMSELEKEMAIHDYIVLNTK YDEEALNGNISSELIFTSYGCLVNNFAVCDGYAKAMQLLLNKVGVYTIRVTGDGNGVSHAWNIVRINGKNYQVDATWNDP VPDSGYVRYKYFNMSDADIAKDHHWVKSDFPACNDNSFKYLHKADYVVKDLDYIYYSNNEDDYNLYKIKIDGSNNQMLTE DRAVNLVYYNDYIYFSNYSDGGTLYKVKNDGTELEQILDNHVENLHYSNGYLTYHNEDLSKDDRMKLEQIVYEVENKEKF NEFFSSYKDWGQAKEVPRNKIWKISFNRAVNSENLKDQVYVMNSSFNKVTDVDVNINEGKNIIITKKTPYKRGGLYYLVI SKPIKDIKGKEIKEPVVMKFKIY
Specific function: Unknown
COG id: COG5279
COG function: function code D; Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58533; Mature: 58533
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKARQILYLIILIFSLNVSNVLAADNIKKYPAPDVEKRSYSTTVTYNKYLYDNILNGLI CCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHH NLKDKVDTSAYSKNADEVFKVLEKVLDDHPEIFYFDYENCSFWSNGILELGYRGNKETIN CCCHHCCCHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEECCCCCHHHHH TMRQQLDTKVQSIINNVITKDMSELEKEMAIHDYIVLNTKYDEEALNGNISSELIFTSYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHCCCCCCEEEEEEHH CLVNNFAVCDGYAKAMQLLLNKVGVYTIRVTGDGNGVSHAWNIVRINGKNYQVDATWNDP HHHCCCHHCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCEEEEEEECCCEEEEEEEECCC VPDSGYVRYKYFNMSDADIAKDHHWVKSDFPACNDNSFKYLHKADYVVKDLDYIYYSNNE CCCCCEEEEEEECCCCCCHHCCCCCHHCCCCCCCCCCEEEHHHHCHHEEECEEEEECCCC DDYNLYKIKIDGSNNQMLTEDRAVNLVYYNDYIYFSNYSDGGTLYKVKNDGTELEQILDN CCCEEEEEEEECCCCCEEECCCEEEEEEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHH HVENLHYSNGYLTYHNEDLSKDDRMKLEQIVYEVENKEKFNEFFSSYKDWGQAKEVPRNK HHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCC IWKISFNRAVNSENLKDQVYVMNSSFNKVTDVDVNINEGKNIIITKKTPYKRGGLYYLVI EEEEEECCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCEEEEECCCCCCCCCEEEEEE SKPIKDIKGKEIKEPVVMKFKIY CCCCHHCCCCCCCCCEEEEEEEC >Mature Secondary Structure MKKARQILYLIILIFSLNVSNVLAADNIKKYPAPDVEKRSYSTTVTYNKYLYDNILNGLI CCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHH NLKDKVDTSAYSKNADEVFKVLEKVLDDHPEIFYFDYENCSFWSNGILELGYRGNKETIN CCCHHCCCHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEECCCCCHHHHH TMRQQLDTKVQSIINNVITKDMSELEKEMAIHDYIVLNTKYDEEALNGNISSELIFTSYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHCCCCCCEEEEEEHH CLVNNFAVCDGYAKAMQLLLNKVGVYTIRVTGDGNGVSHAWNIVRINGKNYQVDATWNDP HHHCCCHHCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCEEEEEEECCCEEEEEEEECCC VPDSGYVRYKYFNMSDADIAKDHHWVKSDFPACNDNSFKYLHKADYVVKDLDYIYYSNNE CCCCCEEEEEEECCCCCCHHCCCCCHHCCCCCCCCCCEEEHHHHCHHEEECEEEEECCCC DDYNLYKIKIDGSNNQMLTEDRAVNLVYYNDYIYFSNYSDGGTLYKVKNDGTELEQILDN CCCEEEEEEEECCCCCEEECCCEEEEEEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHH HVENLHYSNGYLTYHNEDLSKDDRMKLEQIVYEVENKEKFNEFFSSYKDWGQAKEVPRNK HHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCC IWKISFNRAVNSENLKDQVYVMNSSFNKVTDVDVNINEGKNIIITKKTPYKRGGLYYLVI EEEEEECCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCEEEEECCCCCCCCCEEEEEE SKPIKDIKGKEIKEPVVMKFKIY CCCCHHCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA