Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is pstS [H]

Identifier: 170757827

GI number: 170757827

Start: 485368

End: 486279

Strand: Direct

Name: pstS [H]

Synonym: CLD_0365

Alternate gene names: 170757827

Gene position: 485368-486279 (Clockwise)

Preceding gene: 170755215

Following gene: 170755547

Centisome position: 12.26

GC content: 33.22

Gene sequence:

>912_bases
ATGAAAAAAAAGCTTAGTGTAGTGTTAAGTGTTTTATTAACATCTGCGTTACTTTTTACTGCCTGTGGAGGCAAACAAAC
TTCTAATAGCAATGAAGAATCTTCAAAAAAAGAATCAGGCAAAATAATGTGTATAGGTTCTTCAACTTTAGCTCCAGTAG
TTTCTAAAGCAGGGGATACTTTAAAATCTAAACACGGTACATGGAAAAAGATGAATGATAAACTTCCAGATGAAAACATA
GAGTTAGCAGTATCTTCAGGGGGATCTGGAGCAGGGGTAAAGGCTGCTTTAGAAAAAACAGCTAATTTTGGTTTAATATC
TAGAGAAGTTAGCAAAGATGAAAAGGCCAAGATGAAAGAATACAATGAAATAAAAATAGGATATGATGCACTAACACTTT
CAGTTAATCCTCAAAATCCAATATTAAAAAATAAAAAAGGTCTTACATCAGAAGAGATTCAAAAAATATTCTCTGGTGAA
GCTAAAACGTGGAAAGATGTAGATCCTTCACTCCCAGCTAATAAGATAGTACTTGTAGTTAGAGATGCTGGCGGTGGAGC
TGCAGAAGTATTCCAAAAGGCTGTTATGGGAGATAAAAAAGTAAGTAAAGATGCTGTACAAGCACCTTCTATGGGAGCAT
TAACTCAAAAGGTTATAGAAAATAAGGATGCTATAGGATATGCTTCAGTAGGCCTTGTAGATCAAAATAAAGGGAAGTTA
ACACCAATGGAAGTTGATGGTATAGCTCCAACAAAGGAAAATATAACTAGTGGTAAATATAAAATAGCTAGACCACTTTT
ACTTATAAAAGATGGTAAGCTTACAGGAGTAGAACAAACTTTTGTAGATTTCTTAAAATCTGAAGAGGGTTTAAAAATAA
TTGATGAATCAGGTTTTGTTTCTATAAAATAA

Upstream 100 bases:

>100_bases
TAATATAACTAATGATGTAAATATTATGCTAAAATACTATGTGAGACAGGGATTTAACATATATTAACTTAATAGGTAAT
ATTACAAGGGAGGAATATTT

Downstream 100 bases:

>100_bases
ATTCAAGTTTTTCAGAAGTTCTTATTTGTTTTAAGTTGTGTGTTAATTATATAAGTTATTTTAAGCTTATGATTAACGTG
TATACTTTAAAGCAGATTAG

Product: phosphate ABC transporter phosphate-binding protein

Products: NA

Alternate protein names: PBP [H]

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MKKKLSVVLSVLLTSALLFTACGGKQTSNSNEESSKKESGKIMCIGSSTLAPVVSKAGDTLKSKHGTWKKMNDKLPDENI
ELAVSSGGSGAGVKAALEKTANFGLISREVSKDEKAKMKEYNEIKIGYDALTLSVNPQNPILKNKKGLTSEEIQKIFSGE
AKTWKDVDPSLPANKIVLVVRDAGGGAAEVFQKAVMGDKKVSKDAVQAPSMGALTQKVIENKDAIGYASVGLVDQNKGKL
TPMEVDGIAPTKENITSGKYKIARPLLLIKDGKLTGVEQTFVDFLKSEEGLKIIDESGFVSIK

Sequences:

>Translated_303_residues
MKKKLSVVLSVLLTSALLFTACGGKQTSNSNEESSKKESGKIMCIGSSTLAPVVSKAGDTLKSKHGTWKKMNDKLPDENI
ELAVSSGGSGAGVKAALEKTANFGLISREVSKDEKAKMKEYNEIKIGYDALTLSVNPQNPILKNKKGLTSEEIQKIFSGE
AKTWKDVDPSLPANKIVLVVRDAGGGAAEVFQKAVMGDKKVSKDAVQAPSMGALTQKVIENKDAIGYASVGLVDQNKGKL
TPMEVDGIAPTKENITSGKYKIARPLLLIKDGKLTGVEQTFVDFLKSEEGLKIIDESGFVSIK
>Mature_303_residues
MKKKLSVVLSVLLTSALLFTACGGKQTSNSNEESSKKESGKIMCIGSSTLAPVVSKAGDTLKSKHGTWKKMNDKLPDENI
ELAVSSGGSGAGVKAALEKTANFGLISREVSKDEKAKMKEYNEIKIGYDALTLSVNPQNPILKNKKGLTSEEIQKIFSGE
AKTWKDVDPSLPANKIVLVVRDAGGGAAEVFQKAVMGDKKVSKDAVQAPSMGALTQKVIENKDAIGYASVGLVDQNKGKL
TPMEVDGIAPTKENITSGKYKIARPLLLIKDGKLTGVEQTFVDFLKSEEGLKIIDESGFVSIK

Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]

COG id: COG0226

COG function: function code P; ABC-type phosphate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pstS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011862 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32292; Mature: 32292

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKLSVVLSVLLTSALLFTACGGKQTSNSNEESSKKESGKIMCIGSSTLAPVVSKAGDT
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEEECCHHHHHHHHCCHH
LKSKHGTWKKMNDKLPDENIELAVSSGGSGAGVKAALEKTANFGLISREVSKDEKAKMKE
HHHCCCCHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCHHHHHCCHHHHHHHH
YNEIKIGYDALTLSVNPQNPILKNKKGLTSEEIQKIFSGEAKTWKDVDPSLPANKIVLVV
CCCEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
RDAGGGAAEVFQKAVMGDKKVSKDAVQAPSMGALTQKVIENKDAIGYASVGLVDQNKGKL
ECCCCCHHHHHHHHHHCCCHHCHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCC
TPMEVDGIAPTKENITSGKYKIARPLLLIKDGKLTGVEQTFVDFLKSEEGLKIIDESGFV
CCEECCCCCCCCCCCCCCCEEEECEEEEEECCCCCCHHHHHHHHHCCCCCCEEEECCCCE
SIK
EEC
>Mature Secondary Structure
MKKKLSVVLSVLLTSALLFTACGGKQTSNSNEESSKKESGKIMCIGSSTLAPVVSKAGDT
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEEECCHHHHHHHHCCHH
LKSKHGTWKKMNDKLPDENIELAVSSGGSGAGVKAALEKTANFGLISREVSKDEKAKMKE
HHHCCCCHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCHHHHHCCHHHHHHHH
YNEIKIGYDALTLSVNPQNPILKNKKGLTSEEIQKIFSGEAKTWKDVDPSLPANKIVLVV
CCCEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
RDAGGGAAEVFQKAVMGDKKVSKDAVQAPSMGALTQKVIENKDAIGYASVGLVDQNKGKL
ECCCCCHHHHHHHHHHCCCHHCHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCC
TPMEVDGIAPTKENITSGKYKIARPLLLIKDGKLTGVEQTFVDFLKSEEGLKIIDESGFV
CCEECCCCCCCCCCCCCCCEEEECEEEEEECCCCCCHHHHHHHHHCCCCCCEEEECCCCE
SIK
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA