| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755093
Identifier: 170755093
GI number: 170755093
Start: 3902894
End: 3903571
Strand: Reverse
Name: 170755093
Synonym: CLD_0899
Alternate gene names: NA
Gene position: 3903571-3902894 (Counterclockwise)
Preceding gene: 170756044
Following gene: 170755980
Centisome position: 98.62
GC content: 26.7
Gene sequence:
>678_bases ATGATAATAGATACTCATATACATGAAAGTAAATATTCATTAGATAGTGAAATATCCTTAGAAGAAATAGTAAAAAGAGG AAAAGAAATAGGATTAGATGGAGTTTGTATTACAGATCATGAAAGTAGTGATATTATGGATGAAGCACATACTTATTCAA AAGCTACAGGATTTTTAATACTTATTGGTGCTGAAATACTTACATATGAAGGTGATATATTAGTATTTGGATTAAAGGAT ATACCTAAAAATAAAATGCATGCTAAAGATTTATTAAAAATAGTATATGAGAATAATGGAGTGGCTATTAGTGCCCACCC ATATAGAAATAATAATAGAGGTATGGGTGATTATATAAGACAGGCAAAAATGTTAGGTTTATCTGGGGTAGAAGCTTTTA ATGGTAGTACAGAACCCCATCAAAATTTATTAGCATATTCTTTAGCTACTGAGTTAAATCTTCCATGCATAGGATCTAGT GATGCTCATGTTATAGAAAAGGTAGGTAAATATGCTACTGTATTTCCAAATGGAATAAGAGATGAAAAAGATCTAATACA AGCTATAAAAGAAAATAATGTTTGTCCTGCTATGTATGATAATGGACAATATAAATATATAGATATATATAATAAAGTAA TTAATAATTTAGATAAAAAAATATATAAAATTGTATAA
Upstream 100 bases:
>100_bases TATAGGATATGACTATAATTTTATTTAATAAATCAACAAATGATTATAAAAAAATGATATTATCATATAATAGTGATAAA TTATATCTTGGGAGGATTTT
Downstream 100 bases:
>100_bases TACATTGCAAAATTTATTATTATAATTAAATACAAACCAAAAGAGATAATGTTGGATTCTTGAATATTATCTCTTTTATT AAGATATTATTAAAATTATA
Product: phosphotransferase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MIIDTHIHESKYSLDSEISLEEIVKRGKEIGLDGVCITDHESSDIMDEAHTYSKATGFLILIGAEILTYEGDILVFGLKD IPKNKMHAKDLLKIVYENNGVAISAHPYRNNNRGMGDYIRQAKMLGLSGVEAFNGSTEPHQNLLAYSLATELNLPCIGSS DAHVIEKVGKYATVFPNGIRDEKDLIQAIKENNVCPAMYDNGQYKYIDIYNKVINNLDKKIYKIV
Sequences:
>Translated_225_residues MIIDTHIHESKYSLDSEISLEEIVKRGKEIGLDGVCITDHESSDIMDEAHTYSKATGFLILIGAEILTYEGDILVFGLKD IPKNKMHAKDLLKIVYENNGVAISAHPYRNNNRGMGDYIRQAKMLGLSGVEAFNGSTEPHQNLLAYSLATELNLPCIGSS DAHVIEKVGKYATVFPNGIRDEKDLIQAIKENNVCPAMYDNGQYKYIDIYNKVINNLDKKIYKIV >Mature_225_residues MIIDTHIHESKYSLDSEISLEEIVKRGKEIGLDGVCITDHESSDIMDEAHTYSKATGFLILIGAEILTYEGDILVFGLKD IPKNKMHAKDLLKIVYENNGVAISAHPYRNNNRGMGDYIRQAKMLGLSGVEAFNGSTEPHQNLLAYSLATELNLPCIGSS DAHVIEKVGKYATVFPNGIRDEKDLIQAIKENNVCPAMYDNGQYKYIDIYNKVINNLDKKIYKIV
Specific function: Unknown
COG id: COG0613
COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0417 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004013 - InterPro: IPR003141 - InterPro: IPR016195 [H]
Pfam domain/function: PF02811 PHP [H]
EC number: NA
Molecular weight: Translated: 25154; Mature: 25154
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIDTHIHESKYSLDSEISLEEIVKRGKEIGLDGVCITDHESSDIMDEAHTYSKATGFLI CEECCCCCCCHHCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCEEE LIGAEILTYEGDILVFGLKDIPKNKMHAKDLLKIVYENNGVAISAHPYRNNNRGMGDYIR EECCEEEEECCCEEEEECCCCCCCHHHHHHHHHHEECCCCEEEEECCCCCCCCCHHHHHH QAKMLGLSGVEAFNGSTEPHQNLLAYSLATELNLPCIGSSDAHVIEKVGKYATVFPNGIR HHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCEEEECCCCCC DEKDLIQAIKENNVCPAMYDNGQYKYIDIYNKVINNLDKKIYKIV CHHHHHHHHHHCCCCCEEECCCCEEEEHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIIDTHIHESKYSLDSEISLEEIVKRGKEIGLDGVCITDHESSDIMDEAHTYSKATGFLI CEECCCCCCCHHCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCEEE LIGAEILTYEGDILVFGLKDIPKNKMHAKDLLKIVYENNGVAISAHPYRNNNRGMGDYIR EECCEEEEECCCEEEEECCCCCCCHHHHHHHHHHEECCCCEEEEECCCCCCCCCHHHHHH QAKMLGLSGVEAFNGSTEPHQNLLAYSLATELNLPCIGSSDAHVIEKVGKYATVFPNGIR HHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCEEEECCCCCC DEKDLIQAIKENNVCPAMYDNGQYKYIDIYNKVINNLDKKIYKIV CHHHHHHHHHHCCCCCEEECCCCEEEEHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]