Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755052

Identifier: 170755052

GI number: 170755052

Start: 2884201

End: 2885229

Strand: Reverse

Name: 170755052

Synonym: CLD_1857

Alternate gene names: NA

Gene position: 2885229-2884201 (Counterclockwise)

Preceding gene: 170755835

Following gene: 170757325

Centisome position: 72.89

GC content: 30.61

Gene sequence:

>1029_bases
ATGTATAAATTATTGGATTGTTTTGATGATGAATGGGATTTATATTTTAATAAAATGCCTGAGCATATTCGAGATATTTA
CTATACAAGGAAATACTATAAAATGTATGAGTTGAGTGGTGATGGAAAAGGAAAGCTTTTTGTTTATTATAACAATAGTG
GCGATATGGCATTATATCCTTTCATGTTAAAAGAAATACAAGGATATGACATTGGTAACAAGTATTATGATATTGAAACA
GCTTATGGCTATGGAGGTCCTGTTCTGAATTGTGTTGATAAAAGTTTTATAAAAGATTTTGAAGATTCTTTTATAAAGTA
CTGTAAGGCAAACAATATTGTGGCTGAGTTTGTAAGATTTCATCCCTTGATCAAGAACCAAAATGTATTTTGCAAGGATA
TTGAAGTTTTACATAATAGGATTACGGTACAGCTTGATTTGACAAAAAGCTTGAGTGATATTTGGAATGAAGACATTAAA
AGCAAAAACAGAAACATGATAAGAAAAGCAAAAAAAAACGGATTGCATGTGGAAGAAAGTAAGGATTTTGAAATCTTCAA
GAATATATACGAAAGTACGATGGATAAGGTGGATGCAGGAAGCTATTATTATTTTGACAATGGTTACTATGAAACCATTA
AACATAGCAGTGATTATGTATTGCTAAATGTAGAAAAGAATAAGTTGGTAATAGCTTCAGCAATATTCATGGGTCATGGA
GACTATTTTCACTATCATTTGGCTGGAAGTTTGAAAGAGACCTTGAAGTTTGCGCCCAATAACCTTTTGCTATGGGAAGC
CATAAAATATGCGCATGAAAAAGGATACAAAAGAATGCATTTTGGGGGAGGACTAACAAATAGCATGGATGATAATCTTT
TTAGATTCAAAAGCAGCTTTTCAAAAGAACGTGCTGATTTTTACATAGGAAAAAGAGTGCACAATGAAGAAGTTTATGAT
TATCTTATAGGAAAATGGGAAGAAAAGAACAATAAAAAAAAGAAATTGTTTTTACAGTATAAATACTAA

Upstream 100 bases:

>100_bases
GAACTGAAGATGCTAAAATGGTATTTTTACATGGATTCGGTAAGAAATTCATCATGCAAAGATATGTTTATAGAACAAAA
GCTACAGAGGGGGGTCTTAG

Downstream 100 bases:

>100_bases
AAATAAATGAATTAGAGGTGTTAAAACATGAAAACTTTTGATAAAACATGGGAACAAAGGTATAGGACAATACCGGGAAA
CAAATATCCTGTAACAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MYKLLDCFDDEWDLYFNKMPEHIRDIYYTRKYYKMYELSGDGKGKLFVYYNNSGDMALYPFMLKEIQGYDIGNKYYDIET
AYGYGGPVLNCVDKSFIKDFEDSFIKYCKANNIVAEFVRFHPLIKNQNVFCKDIEVLHNRITVQLDLTKSLSDIWNEDIK
SKNRNMIRKAKKNGLHVEESKDFEIFKNIYESTMDKVDAGSYYYFDNGYYETIKHSSDYVLLNVEKNKLVIASAIFMGHG
DYFHYHLAGSLKETLKFAPNNLLLWEAIKYAHEKGYKRMHFGGGLTNSMDDNLFRFKSSFSKERADFYIGKRVHNEEVYD
YLIGKWEEKNNKKKKLFLQYKY

Sequences:

>Translated_342_residues
MYKLLDCFDDEWDLYFNKMPEHIRDIYYTRKYYKMYELSGDGKGKLFVYYNNSGDMALYPFMLKEIQGYDIGNKYYDIET
AYGYGGPVLNCVDKSFIKDFEDSFIKYCKANNIVAEFVRFHPLIKNQNVFCKDIEVLHNRITVQLDLTKSLSDIWNEDIK
SKNRNMIRKAKKNGLHVEESKDFEIFKNIYESTMDKVDAGSYYYFDNGYYETIKHSSDYVLLNVEKNKLVIASAIFMGHG
DYFHYHLAGSLKETLKFAPNNLLLWEAIKYAHEKGYKRMHFGGGLTNSMDDNLFRFKSSFSKERADFYIGKRVHNEEVYD
YLIGKWEEKNNKKKKLFLQYKY
>Mature_342_residues
MYKLLDCFDDEWDLYFNKMPEHIRDIYYTRKYYKMYELSGDGKGKLFVYYNNSGDMALYPFMLKEIQGYDIGNKYYDIET
AYGYGGPVLNCVDKSFIKDFEDSFIKYCKANNIVAEFVRFHPLIKNQNVFCKDIEVLHNRITVQLDLTKSLSDIWNEDIK
SKNRNMIRKAKKNGLHVEESKDFEIFKNIYESTMDKVDAGSYYYFDNGYYETIKHSSDYVLLNVEKNKLVIASAIFMGHG
DYFHYHLAGSLKETLKFAPNNLLLWEAIKYAHEKGYKRMHFGGGLTNSMDDNLFRFKSSFSKERADFYIGKRVHNEEVYD
YLIGKWEEKNNKKKKLFLQYKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40729; Mature: 40729

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKLLDCFDDEWDLYFNKMPEHIRDIYYTRKYYKMYELSGDGKGKLFVYYNNSGDMALYP
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEEECCCCCEEEHH
FMLKEIQGYDIGNKYYDIETAYGYGGPVLNCVDKSFIKDFEDSFIKYCKANNIVAEFVRF
HHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
HPLIKNQNVFCKDIEVLHNRITVQLDLTKSLSDIWNEDIKSKNRNMIRKAKKNGLHVEES
HHHHCCCCCHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
KDFEIFKNIYESTMDKVDAGSYYYFDNGYYETIKHSSDYVLLNVEKNKLVIASAIFMGHG
CCHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCCCEEEEEECCCCEEEEEEEEECCC
DYFHYHLAGSLKETLKFAPNNLLLWEAIKYAHEKGYKRMHFGGGLTNSMDDNLFRFKSSF
CEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHH
SKERADFYIGKRVHNEEVYDYLIGKWEEKNNKKKKLFLQYKY
CHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MYKLLDCFDDEWDLYFNKMPEHIRDIYYTRKYYKMYELSGDGKGKLFVYYNNSGDMALYP
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEEECCCCCEEEHH
FMLKEIQGYDIGNKYYDIETAYGYGGPVLNCVDKSFIKDFEDSFIKYCKANNIVAEFVRF
HHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
HPLIKNQNVFCKDIEVLHNRITVQLDLTKSLSDIWNEDIKSKNRNMIRKAKKNGLHVEES
HHHHCCCCCHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
KDFEIFKNIYESTMDKVDAGSYYYFDNGYYETIKHSSDYVLLNVEKNKLVIASAIFMGHG
CCHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCCCEEEEEECCCCEEEEEEEEECCC
DYFHYHLAGSLKETLKFAPNNLLLWEAIKYAHEKGYKRMHFGGGLTNSMDDNLFRFKSSF
CEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHH
SKERADFYIGKRVHNEEVYDYLIGKWEEKNNKKKKLFLQYKY
CHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA