| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is fhs
Identifier: 170755010
GI number: 170755010
Start: 3836674
End: 3838347
Strand: Reverse
Name: fhs
Synonym: CLD_0967
Alternate gene names: 170755010
Gene position: 3838347-3836674 (Counterclockwise)
Preceding gene: 170755847
Following gene: 170755838
Centisome position: 96.97
GC content: 31.36
Gene sequence:
>1674_bases ATGTTTAAATCCGATATAGAAATAGCACAAGAATCTAAAATGAAAAATATAAAAAATATAGCTGAGAAGATAGGGTTAAC AGAAGAAGATATAGATTTATATGGAAAATATAAATGTAAAATTTCATTAGATGTTTTAGAGAGCAATAAAGATAAAAAAG ATGGAAAACTAATTTTAGTTACAGCTATAAATCCTACTCCAGCAGGAGAAGGAAAATCCACAGTTACAGTAGGTTTAGGG CAAGCCTTATGGAAGAAAAATAAAAAAGCGGTTATAGCATTAAGAGAACCTTCTTTGGGGCCTGTATTTGGTATAAAAGG AGGTGCAGCTGGAGGAGGATACTCTCAAGTTGTACCTATGGAAGATATAAATCTTCATTTTACAGGTGATATGCATGCTA TTACTTCAGCTAATAATTTATTAGCTGCTGCTATAGATAACCATATTCATCAAGGGAATATTTTGAAGATTGATCAAAGA AGAATTCTCTTTAAAAGAGTTATGGATATGAATGATAGAGCTTTAAGAAATGTAATTGTAGCCTTAGGTGGAAAAATAAA TGGGTTTCCAAGAGAAGATGGATTTATGATAACTGTAGCTTCAGAGATTATGGCTATATTATGTTTAGCAGAAGATCTTA TGGATCTTAAGAATAAAATGGGAGAAATATTAGTAGCTTATAGTACAGAGGGGAAACCTATATACTGCAAAGATTTAGAG GTTCAAGGAGCTATGGCATTATTAATGAAAGATGCTATAAAACCTAATTTAGTTCAAACTTTAGAAAATACTCCGGCTAT TATACACGGTGGACCTTTCGCTAATATAGCTCATGGATGTAATAGTATATTGGGAACAAAGATGGCCTTAAAATTAGGAG ATTATGTAATAACAGAGGCAGGTTTTGGAGCAGATCTAGGAGCAGAAAAGTTTTTTGATATTAAGTGTAGAAAAGCTAAT TTAAAACCAAATTGTGTAGTTATAGTAGCTACAGTAAGAGCTTTAAAATATAATGGTGGGATTCCTAAGGAAAATCTAAA GGAACAAAATATGGAAGCCCTATCAAAGGGTATAAAAAATCTAGGAAAACATATAGAGAATGTTAATAAGTTTGGTGTAC CAGCAGTAGTTGCTATAAATAAATTTATATCAGATACAGAAGAAGAAATAGAATTTATAAAAAAATATTGTAAAGAATTA GGTGCAGAAGTGTCTATCGCAGAGGTATGGGAAAAAGGTGGAAATGGTGGCTTAGAATTAGCTGATAAAGTTTTAGATAC CATAGAAAATAAAGAAAGTAAATTTAATCCTATATACGAGGAAACTCTTAATATAAAACAAAAAATAGAAACAATTGCCC AGGAAATATATGGAGCAGAAGGGGTAGATTATTCTAAAGAGGCAGAAAAGCAAATATCTGAAATAGAAAAATTAGATTTA GATAAAAAGCCTGTATGTATGGCAAAAACTCAGTATTCTTTATCAGATGATGCTAAACTATTAGGAAGACCATGTGGATT TAGAATTAATGTCAAAGAAGTTAGAATATCCAATGGAGCTGGATTTATAGTTGTGCTAACAGGAAATGTTATGACTATGC CAGGTTTACCTAAGAAACCTGCAGCTAACAATATGGATGTATTATCAGATGGCAATATAGTTGGACTATTCTAA
Upstream 100 bases:
>100_bases AGAGTAGAATTAAAAAATTATTAAACAACGAATAAATAATTATTCAATTACACAAAAATAATTAATAGGGTCCGTATTAT AACTAAGGGGGAATATATAA
Downstream 100 bases:
>100_bases CATTAATATAACAGAAGTATTAACTTGACAAAATAATTGGAACTGATAAAATAAAATTATTAAATTGACATTAAATCAAG CATAAAGGGCAGCGGCAAGG
Product: formate--tetrahydrofolate ligase
Products: NA
Alternate protein names: Formyltetrahydrofolate synthetase; FHS; FTHFS [H]
Number of amino acids: Translated: 557; Mature: 557
Protein sequence:
>557_residues MFKSDIEIAQESKMKNIKNIAEKIGLTEEDIDLYGKYKCKISLDVLESNKDKKDGKLILVTAINPTPAGEGKSTVTVGLG QALWKKNKKAVIALREPSLGPVFGIKGGAAGGGYSQVVPMEDINLHFTGDMHAITSANNLLAAAIDNHIHQGNILKIDQR RILFKRVMDMNDRALRNVIVALGGKINGFPREDGFMITVASEIMAILCLAEDLMDLKNKMGEILVAYSTEGKPIYCKDLE VQGAMALLMKDAIKPNLVQTLENTPAIIHGGPFANIAHGCNSILGTKMALKLGDYVITEAGFGADLGAEKFFDIKCRKAN LKPNCVVIVATVRALKYNGGIPKENLKEQNMEALSKGIKNLGKHIENVNKFGVPAVVAINKFISDTEEEIEFIKKYCKEL GAEVSIAEVWEKGGNGGLELADKVLDTIENKESKFNPIYEETLNIKQKIETIAQEIYGAEGVDYSKEAEKQISEIEKLDL DKKPVCMAKTQYSLSDDAKLLGRPCGFRINVKEVRISNGAGFIVVLTGNVMTMPGLPKKPAANNMDVLSDGNIVGLF
Sequences:
>Translated_557_residues MFKSDIEIAQESKMKNIKNIAEKIGLTEEDIDLYGKYKCKISLDVLESNKDKKDGKLILVTAINPTPAGEGKSTVTVGLG QALWKKNKKAVIALREPSLGPVFGIKGGAAGGGYSQVVPMEDINLHFTGDMHAITSANNLLAAAIDNHIHQGNILKIDQR RILFKRVMDMNDRALRNVIVALGGKINGFPREDGFMITVASEIMAILCLAEDLMDLKNKMGEILVAYSTEGKPIYCKDLE VQGAMALLMKDAIKPNLVQTLENTPAIIHGGPFANIAHGCNSILGTKMALKLGDYVITEAGFGADLGAEKFFDIKCRKAN LKPNCVVIVATVRALKYNGGIPKENLKEQNMEALSKGIKNLGKHIENVNKFGVPAVVAINKFISDTEEEIEFIKKYCKEL GAEVSIAEVWEKGGNGGLELADKVLDTIENKESKFNPIYEETLNIKQKIETIAQEIYGAEGVDYSKEAEKQISEIEKLDL DKKPVCMAKTQYSLSDDAKLLGRPCGFRINVKEVRISNGAGFIVVLTGNVMTMPGLPKKPAANNMDVLSDGNIVGLF >Mature_557_residues MFKSDIEIAQESKMKNIKNIAEKIGLTEEDIDLYGKYKCKISLDVLESNKDKKDGKLILVTAINPTPAGEGKSTVTVGLG QALWKKNKKAVIALREPSLGPVFGIKGGAAGGGYSQVVPMEDINLHFTGDMHAITSANNLLAAAIDNHIHQGNILKIDQR RILFKRVMDMNDRALRNVIVALGGKINGFPREDGFMITVASEIMAILCLAEDLMDLKNKMGEILVAYSTEGKPIYCKDLE VQGAMALLMKDAIKPNLVQTLENTPAIIHGGPFANIAHGCNSILGTKMALKLGDYVITEAGFGADLGAEKFFDIKCRKAN LKPNCVVIVATVRALKYNGGIPKENLKEQNMEALSKGIKNLGKHIENVNKFGVPAVVAINKFISDTEEEIEFIKKYCKEL GAEVSIAEVWEKGGNGGLELADKVLDTIENKESKFNPIYEETLNIKQKIETIAQEIYGAEGVDYSKEAEKQISEIEKLDL DKKPVCMAKTQYSLSDDAKLLGRPCGFRINVKEVRISNGAGFIVVLTGNVMTMPGLPKKPAANNMDVLSDGNIVGLF
Specific function: Unknown
COG id: COG2759
COG function: function code F; Formyltetrahydrofolate synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the formate--tetrahydrofolate ligase family [H]
Homologues:
Organism=Homo sapiens, GI222136639, Length=620, Percent_Identity=44.1935483870968, Blast_Score=468, Evalue=1e-132, Organism=Homo sapiens, GI36796743, Length=619, Percent_Identity=45.0726978998384, Blast_Score=461, Evalue=1e-129, Organism=Homo sapiens, GI310124614, Length=86, Percent_Identity=41.8604651162791, Blast_Score=66, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17568737, Length=622, Percent_Identity=44.0514469453376, Blast_Score=468, Evalue=1e-132, Organism=Caenorhabditis elegans, GI17568739, Length=622, Percent_Identity=44.0514469453376, Blast_Score=468, Evalue=1e-132, Organism=Saccharomyces cerevisiae, GI6321643, Length=626, Percent_Identity=42.6517571884984, Blast_Score=452, Evalue=1e-128, Organism=Saccharomyces cerevisiae, GI6319558, Length=633, Percent_Identity=42.3380726698262, Blast_Score=450, Evalue=1e-127, Organism=Drosophila melanogaster, GI62472483, Length=619, Percent_Identity=43.1340872374798, Blast_Score=464, Evalue=1e-131, Organism=Drosophila melanogaster, GI45551871, Length=619, Percent_Identity=43.1340872374798, Blast_Score=464, Evalue=1e-131, Organism=Drosophila melanogaster, GI24645718, Length=619, Percent_Identity=43.1340872374798, Blast_Score=463, Evalue=1e-130, Organism=Drosophila melanogaster, GI17137370, Length=619, Percent_Identity=43.1340872374798, Blast_Score=463, Evalue=1e-130,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000559 - InterPro: IPR020628 [H]
Pfam domain/function: PF01268 FTHFS [H]
EC number: =6.3.4.3 [H]
Molecular weight: Translated: 60701; Mature: 60701
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: PS00721 FTHFS_1 ; PS00722 FTHFS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKSDIEIAQESKMKNIKNIAEKIGLTEEDIDLYGKYKCKISLDVLESNKDKKDGKLILV CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCEEEE TAINPTPAGEGKSTVTVGLGQALWKKNKKAVIALREPSLGPVFGIKGGAAGGGYSQVVPM EEECCCCCCCCCCEEEEECCHHHHCCCCCEEEEEECCCCCCEEECCCCCCCCCCCEECCC EDINLHFTGDMHAITSANNLLAAAIDNHIHQGNILKIDQRRILFKRVMDMNDRALRNVIV CCCEEEECCCCCEECCCCCCHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHH ALGGKINGFPREDGFMITVASEIMAILCLAEDLMDLKNKMGEILVAYSTEGKPIYCKDLE HHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCC VQGAMALLMKDAIKPNLVQTLENTPAIIHGGPFANIAHGCNSILGTKMALKLGDYVITEA HHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEECC GFGADLGAEKFFDIKCRKANLKPNCVVIVATVRALKYNGGIPKENLKEQNMEALSKGIKN CCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHH LGKHIENVNKFGVPAVVAINKFISDTEEEIEFIKKYCKELGAEVSIAEVWEKGGNGGLEL HHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHH ADKVLDTIENKESKFNPIYEETLNIKQKIETIAQEIYGAEGVDYSKEAEKQISEIEKLDL HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC DKKPVCMAKTQYSLSDDAKLLGRPCGFRINVKEVRISNGAGFIVVLTGNVMTMPGLPKKP CCCCEEEEECCCCCCCCHHHHCCCCCCEEEEEEEEEECCCCEEEEEECCEEECCCCCCCC AANNMDVLSDGNIVGLF CCCCCCEECCCCEEEEC >Mature Secondary Structure MFKSDIEIAQESKMKNIKNIAEKIGLTEEDIDLYGKYKCKISLDVLESNKDKKDGKLILV CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCEEEE TAINPTPAGEGKSTVTVGLGQALWKKNKKAVIALREPSLGPVFGIKGGAAGGGYSQVVPM EEECCCCCCCCCCEEEEECCHHHHCCCCCEEEEEECCCCCCEEECCCCCCCCCCCEECCC EDINLHFTGDMHAITSANNLLAAAIDNHIHQGNILKIDQRRILFKRVMDMNDRALRNVIV CCCEEEECCCCCEECCCCCCHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHH ALGGKINGFPREDGFMITVASEIMAILCLAEDLMDLKNKMGEILVAYSTEGKPIYCKDLE HHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCC VQGAMALLMKDAIKPNLVQTLENTPAIIHGGPFANIAHGCNSILGTKMALKLGDYVITEA HHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEECC GFGADLGAEKFFDIKCRKANLKPNCVVIVATVRALKYNGGIPKENLKEQNMEALSKGIKN CCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHH LGKHIENVNKFGVPAVVAINKFISDTEEEIEFIKKYCKELGAEVSIAEVWEKGGNGGLEL HHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHH ADKVLDTIENKESKFNPIYEETLNIKQKIETIAQEIYGAEGVDYSKEAEKQISEIEKLDL HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC DKKPVCMAKTQYSLSDDAKLLGRPCGFRINVKEVRISNGAGFIVVLTGNVMTMPGLPKKP CCCCEEEEECCCCCCCCHHHHCCCCCCEEEEEEEEEECCCCEEEEEECCEEECCCCCCCC AANNMDVLSDGNIVGLF CCCCCCEECCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA