| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is coaX
Identifier: 170755838
GI number: 170755838
Start: 3835743
End: 3836519
Strand: Reverse
Name: coaX
Synonym: CLD_0968
Alternate gene names: 170755838
Gene position: 3836519-3835743 (Counterclockwise)
Preceding gene: 170755010
Following gene: 170756229
Centisome position: 96.93
GC content: 27.28
Gene sequence:
>777_bases ATGATTTTAGTTTTAGATGTAGGAAATACTAATATAGTTTTAGGTATATATAAAAATAAAGAATTAATAGCAAACTGGAG ATTGGCTACAGATAATAAAAGGACAGCAGATGAATATGGAATACAAGTAATAGAATTATTTTCACATAATAATTTAAGTT TTTCTGATATAGAAGGAGTAATTATATCCTCCGTAGTTCCTAATATAATGTATTCTTTAGAACATATGATATCAAAATAT TTTAATATAAAACCTATAATAGTAGGACCTGGAGTAAAAACAGGTATAAACATAAAATATGATAATCCAAAGGAAGTTGG AGCAGATAGAATTGTTAATGCAGTAGCAGCTCATGAAATTTATAAAAAACCATTAATAATTATTGATTTTGGAACAGCTA CTACATTTTGTGCTGTAACAAAAGAAGCCAATTATTTAGGTGGAACTATATGTCCAGGTATAAAAATTTCTTCAGATGCT TTATTTGATAAAGCAGCTAAATTACCAAGGGTAGAACTTGTAAAAACTCCTGGAGTTATATGTAAAAATACTGTAGCTAG TATACAATCTGGAATAATTTATGGTTATGCTGGGCAAGTAGATTATATAGTGTCAAAAATGAAAAAGGAAATGATGGATC TAGGAGAAGAGGAACCTTTTGTAGTTGCTACAGGAGGTTTTGCTAAATTAATTAGTGAAGAATCAAAAAGTATTGATGAA ATAAATGCTATTTTAACCTTAGAAGGATTAAGAGTAATATATGAAAAAAATAAATAA
Upstream 100 bases:
>100_bases AATTATTAAATTGACATTAAATCAAGCATAAAGGGCAGCGGCAAGGCTGCTCTTTCATTGTATTTAAGACCCTATTTTGC TTATTAAGGTGGTGCTTTAT
Downstream 100 bases:
>100_bases GGTGATTATATGAATATAGGAAATCTTATATTTCATAATAATGTATTTTTAGCACCTATGGCAGGATTTACAGATATAGC TTTTAGAGAGATATGTAAAG
Product: pantothenate kinase
Products: NA
Alternate protein names: PanK-III; Pantothenic acid kinase
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MILVLDVGNTNIVLGIYKNKELIANWRLATDNKRTADEYGIQVIELFSHNNLSFSDIEGVIISSVVPNIMYSLEHMISKY FNIKPIIVGPGVKTGINIKYDNPKEVGADRIVNAVAAHEIYKKPLIIIDFGTATTFCAVTKEANYLGGTICPGIKISSDA LFDKAAKLPRVELVKTPGVICKNTVASIQSGIIYGYAGQVDYIVSKMKKEMMDLGEEEPFVVATGGFAKLISEESKSIDE INAILTLEGLRVIYEKNK
Sequences:
>Translated_258_residues MILVLDVGNTNIVLGIYKNKELIANWRLATDNKRTADEYGIQVIELFSHNNLSFSDIEGVIISSVVPNIMYSLEHMISKY FNIKPIIVGPGVKTGINIKYDNPKEVGADRIVNAVAAHEIYKKPLIIIDFGTATTFCAVTKEANYLGGTICPGIKISSDA LFDKAAKLPRVELVKTPGVICKNTVASIQSGIIYGYAGQVDYIVSKMKKEMMDLGEEEPFVVATGGFAKLISEESKSIDE INAILTLEGLRVIYEKNK >Mature_258_residues MILVLDVGNTNIVLGIYKNKELIANWRLATDNKRTADEYGIQVIELFSHNNLSFSDIEGVIISSVVPNIMYSLEHMISKY FNIKPIIVGPGVKTGINIKYDNPKEVGADRIVNAVAAHEIYKKPLIIIDFGTATTFCAVTKEANYLGGTICPGIKISSDA LFDKAAKLPRVELVKTPGVICKNTVASIQSGIIYGYAGQVDYIVSKMKKEMMDLGEEEPFVVATGGFAKLISEESKSIDE INAILTLEGLRVIYEKNK
Specific function: Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
COG id: COG1521
COG function: function code K; Putative transcriptional regulator, homolog of Bvg accessory factor
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III pantothenate kinase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAX_CLOB1 (A7FZA9)
Other databases:
- EMBL: CP000726 - RefSeq: YP_001385838.1 - ProteinModelPortal: A7FZA9 - SMR: A7FZA9 - STRING: A7FZA9 - GeneID: 5397101 - GenomeReviews: CP000726_GR - KEGG: cba:CLB_3597 - eggNOG: COG1521 - HOGENOM: HBG634537 - OMA: PAIVVDF - ProtClustDB: PRK13318 - BioCyc: CBOT441770:CLB_3597-MONOMER - GO: GO:0005737 - HAMAP: MF_01274 - InterPro: IPR004619 - TIGRFAMs: TIGR00671
Pfam domain/function: PF03309 Bvg_acc_factor
EC number: =2.7.1.33
Molecular weight: Translated: 28309; Mature: 28309
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: ACT_SITE 109-109 BINDING 100-100 BINDING 132-132 BINDING 184-184
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILVLDVGNTNIVLGIYKNKELIANWRLATDNKRTADEYGIQVIELFSHNNLSFSDIEGV CEEEEEECCCEEEEEEECCCEEEEEEEEECCCCCCHHHHCEEEEEEECCCCCCHHHHCHH IISSVVPNIMYSLEHMISKYFNIKPIIVGPGVKTGINIKYDNPKEVGADRIVNAVAAHEI HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCHHHHCHHHHHHHHHHHHH YKKPLIIIDFGTATTFCAVTKEANYLGGTICPGIKISSDALFDKAAKLPRVELVKTPGVI HHCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEECCHHHHHHHHCCCCEEEECCCCCH CKNTVASIQSGIIYGYAGQVDYIVSKMKKEMMDLGEEEPFVVATGGFAKLISEESKSIDE HHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHCCHHH INAILTLEGLRVIYEKNK HHHEEEECCEEEEEECCC >Mature Secondary Structure MILVLDVGNTNIVLGIYKNKELIANWRLATDNKRTADEYGIQVIELFSHNNLSFSDIEGV CEEEEEECCCEEEEEEECCCEEEEEEEEECCCCCCHHHHCEEEEEEECCCCCCHHHHCHH IISSVVPNIMYSLEHMISKYFNIKPIIVGPGVKTGINIKYDNPKEVGADRIVNAVAAHEI HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCHHHHCHHHHHHHHHHHHH YKKPLIIIDFGTATTFCAVTKEANYLGGTICPGIKISSDALFDKAAKLPRVELVKTPGVI HHCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEECCHHHHHHHHCCCCEEEECCCCCH CKNTVASIQSGIIYGYAGQVDYIVSKMKKEMMDLGEEEPFVVATGGFAKLISEESKSIDE HHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHCCHHH INAILTLEGLRVIYEKNK HHHEEEECCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA