| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is tal [H]
Identifier: 170754914
GI number: 170754914
Start: 2297607
End: 2298323
Strand: Reverse
Name: tal [H]
Synonym: CLD_2482
Alternate gene names: 170754914
Gene position: 2298323-2297607 (Counterclockwise)
Preceding gene: 170755912
Following gene: 170757757
Centisome position: 58.06
GC content: 30.82
Gene sequence:
>717_bases ATGAAGTACAATGATTTAAAAATTAAGATATTTGCAGACGGAGCAGATTTAAATGGTATGTTAGATGCTTACAATAAAGG AATAGTTAAAGGATTTACAACAAATCCATCTCTTATGAAAAAAGCAGGAATTACTGATTACAAGGAATTTGCAAAGGAAG TATTGGCAAAAATAAAAGATATGCCTGTATCCTTTGAAGTTTTTTCAGATGATTTAGAAACTATGGAAAAGGAAGCAGAG GTTCTTGGAAATTTAGGTGAGAATGTTTATATAAAAATACCTGTTACAAACACAAAGGGTGAATCAACAGCACCACTTAT AAAGAAACTTTCAGAAAAAGGATATCACCTTAATGTAACTGCTATATTTACAATAGACCAAGTAAAAGAAGTAGTAGAAG CATTAAAATCCGGAGTAGATAGTATAGTATCAGTATTTGCAGGAAGAATAGCAGATACAGGAGAAGATCCAGTTAAAATT ATGAAAGAAGCAAGCAAAATTTGTAAGACTAAAGAAGGCGTAGAACTTTTATGGGCAAGTTGCAGAGAATTTTATAGCAT AGTAGAAGCAGATAAATGTGGTTGTGAAATAATTACTGTAACAAATGACATACTTAAAAAAATGCCTAACATGGGAAAGG ATCTAAAAGAATATTCTATTGAAACTGTAAGAGGATTTTACAAAGACGCATCTAGCCTTGGATTTTCAATTTTATAA
Upstream 100 bases:
>100_bases TGTTGAAATATATTAATCTTGATGGTGAAACCCTTAGTTTATATAATTAAGACATAGAAGAGAAAAGGATTACAGTATAT AAAACTAAGGAGTGATTTTT
Downstream 100 bases:
>100_bases TTGCAAGAAGGGCGGTAAAACTAATGCTTAAAAATTATATAAACGATCAGGTTGTAGAAGTAAACGTGGAAGTAACAAAC TGGGAAGAGGCAGTAAGATT
Product: putative translaldolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MKYNDLKIKIFADGADLNGMLDAYNKGIVKGFTTNPSLMKKAGITDYKEFAKEVLAKIKDMPVSFEVFSDDLETMEKEAE VLGNLGENVYIKIPVTNTKGESTAPLIKKLSEKGYHLNVTAIFTIDQVKEVVEALKSGVDSIVSVFAGRIADTGEDPVKI MKEASKICKTKEGVELLWASCREFYSIVEADKCGCEIITVTNDILKKMPNMGKDLKEYSIETVRGFYKDASSLGFSIL
Sequences:
>Translated_238_residues MKYNDLKIKIFADGADLNGMLDAYNKGIVKGFTTNPSLMKKAGITDYKEFAKEVLAKIKDMPVSFEVFSDDLETMEKEAE VLGNLGENVYIKIPVTNTKGESTAPLIKKLSEKGYHLNVTAIFTIDQVKEVVEALKSGVDSIVSVFAGRIADTGEDPVKI MKEASKICKTKEGVELLWASCREFYSIVEADKCGCEIITVTNDILKKMPNMGKDLKEYSIETVRGFYKDASSLGFSIL >Mature_238_residues MKYNDLKIKIFADGADLNGMLDAYNKGIVKGFTTNPSLMKKAGITDYKEFAKEVLAKIKDMPVSFEVFSDDLETMEKEAE VLGNLGENVYIKIPVTNTKGESTAPLIKKLSEKGYHLNVTAIFTIDQVKEVVEALKSGVDSIVSVFAGRIADTGEDPVKI MKEASKICKTKEGVELLWASCREFYSIVEADKCGCEIITVTNDILKKMPNMGKDLKEYSIETVRGFYKDASSLGFSIL
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 3B subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001585 - InterPro: IPR004731 - InterPro: IPR022999 - InterPro: IPR018225 [H]
Pfam domain/function: PF00923 Transaldolase [H]
EC number: =2.2.1.2 [H]
Molecular weight: Translated: 26312; Mature: 26312
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYNDLKIKIFADGADLNGMLDAYNKGIVKGFTTNPSLMKKAGITDYKEFAKEVLAKIKD CCCCCEEEEEEECCCCCCHHHHHHCCCCEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHC MPVSFEVFSDDLETMEKEAEVLGNLGENVYIKIPVTNTKGESTAPLIKKLSEKGYHLNVT CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEE AIFTIDQVKEVVEALKSGVDSIVSVFAGRIADTGEDPVKIMKEASKICKTKEGVELLWAS EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH CREFYSIVEADKCGCEIITVTNDILKKMPNMGKDLKEYSIETVRGFYKDASSLGFSIL HHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKYNDLKIKIFADGADLNGMLDAYNKGIVKGFTTNPSLMKKAGITDYKEFAKEVLAKIKD CCCCCEEEEEEECCCCCCHHHHHHCCCCEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHC MPVSFEVFSDDLETMEKEAEVLGNLGENVYIKIPVTNTKGESTAPLIKKLSEKGYHLNVT CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEE AIFTIDQVKEVVEALKSGVDSIVSVFAGRIADTGEDPVKIMKEASKICKTKEGVELLWAS EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH CREFYSIVEADKCGCEIITVTNDILKKMPNMGKDLKEYSIETVRGFYKDASSLGFSIL HHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA