| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is ulaC [H]
Identifier: 170757757
GI number: 170757757
Start: 2297146
End: 2297583
Strand: Reverse
Name: ulaC [H]
Synonym: CLD_2483
Alternate gene names: 170757757
Gene position: 2297583-2297146 (Counterclockwise)
Preceding gene: 170754914
Following gene: 170756053
Centisome position: 58.05
GC content: 33.79
Gene sequence:
>438_bases ATGCTTAAAAATTATATAAACGATCAGGTTGTAGAAGTAAACGTGGAAGTAACAAACTGGGAAGAGGCAGTAAGATTAGG AGGAAAGCTATTAGAGGAAGATGGAGCCGTAGAACATAGCTATATTGATGCTATGGTAGATACGGTAAAAAACATGGGAC CATACATTGTAATAGCACCTGGAATAGCAATGCCTCATGCAAGACCTGAAGCTGGAGCTAAAAATATAAGAATTGGACTT TTGAAGCTTAAAAATCCAGTTAATTTTGGCAACGAAGAACATGATCCTGTAGATATTGTTATATTCTTATGTGCTGTAGA TAATAAGGCACACATTGAGGTTTTAGGGGAACTTGTTCAGCTTATAGAAGATGATGATTTTTTAAAGATTATACGAAATG CATCAACAAAGAAAGAAATACTAGATTATATAAAATAA
Upstream 100 bases:
>100_bases ATCTAAAAGAATATTCTATTGAAACTGTAAGAGGATTTTACAAAGACGCATCTAGCCTTGGATTTTCAATTTTATAATTG CAAGAAGGGCGGTAAAACTA
Downstream 100 bases:
>100_bases AATATATAAACAAATTGGAGGGATTAATATGAATATTTTAACTGTATGTGGAAATGGAATTGGAAGCAGTCTTATGCTTG CTATGAAGATAGAGGAAATA
Product: PTS system, L-ascorbate family, IIA component
Products: Protein Histidine; Sugar Phosphate. [C]
Alternate protein names: PTS system ascorbate-specific EIIA component [H]
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MLKNYINDQVVEVNVEVTNWEEAVRLGGKLLEEDGAVEHSYIDAMVDTVKNMGPYIVIAPGIAMPHARPEAGAKNIRIGL LKLKNPVNFGNEEHDPVDIVIFLCAVDNKAHIEVLGELVQLIEDDDFLKIIRNASTKKEILDYIK
Sequences:
>Translated_145_residues MLKNYINDQVVEVNVEVTNWEEAVRLGGKLLEEDGAVEHSYIDAMVDTVKNMGPYIVIAPGIAMPHARPEAGAKNIRIGL LKLKNPVNFGNEEHDPVDIVIFLCAVDNKAHIEVLGELVQLIEDDDFLKIIRNASTKKEILDYIK >Mature_145_residues MLKNYINDQVVEVNVEVTNWEEAVRLGGKLLEEDGAVEHSYIDAMVDTVKNMGPYIVIAPGIAMPHARPEAGAKNIRIGL LKLKNPVNFGNEEHDPVDIVIFLCAVDNKAHIEVLGELVQLIEDDDFLKIIRNASTKKEILDYIK
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1762
COG function: function code GT; Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI2367359, Length=138, Percent_Identity=42.0289855072464, Blast_Score=117, Evalue=3e-28, Organism=Escherichia coli, GI1790755, Length=141, Percent_Identity=37.5886524822695, Blast_Score=111, Evalue=2e-26, Organism=Escherichia coli, GI1789302, Length=145, Percent_Identity=34.4827586206897, Blast_Score=82, Evalue=1e-17, Organism=Escherichia coli, GI1790027, Length=126, Percent_Identity=31.7460317460317, Blast_Score=65, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016152 - InterPro: IPR002178 [H]
Pfam domain/function: PF00359 PTS_EIIA_2 [H]
EC number: 2.7.1.69 [C]
Molecular weight: Translated: 16205; Mature: 16205
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS00372 PTS_EIIA_TYPE_2_HIS ; PS51094 PTS_EIIA_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKNYINDQVVEVNVEVTNWEEAVRLGGKLLEEDGAVEHSYIDAMVDTVKNMGPYIVIAP CCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEC GIAMPHARPEAGAKNIRIGLLKLKNPVNFGNEEHDPVDIVIFLCAVDNKAHIEVLGELVQ CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHH LIEDDDFLKIIRNASTKKEILDYIK HHCCCHHHHHHHCCCHHHHHHHHCC >Mature Secondary Structure MLKNYINDQVVEVNVEVTNWEEAVRLGGKLLEEDGAVEHSYIDAMVDTVKNMGPYIVIAP CCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEC GIAMPHARPEAGAKNIRIGLLKLKNPVNFGNEEHDPVDIVIFLCAVDNKAHIEVLGELVQ CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHH LIEDDDFLKIIRNASTKKEILDYIK HHCCCHHHHHHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Protein N-Phosphohistidine; Sugar [C]
Specific reaction: Protein N-Phosphohistidine + Sugar = Protein Histidine + Sugar Phosphate. [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]