| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754899
Identifier: 170754899
GI number: 170754899
Start: 667979
End: 668428
Strand: Reverse
Name: 170754899
Synonym: CLD_0204
Alternate gene names: NA
Gene position: 668428-667979 (Counterclockwise)
Preceding gene: 170756821
Following gene: 170756176
Centisome position: 16.89
GC content: 27.56
Gene sequence:
>450_bases ATGAGAAATAAAATAATTGCAGATTTTGCAAAGGAAGTAGATATAGATATTTGGATGAATTTAGTTGAAATTGTTAAAGA GGATTTTCCAGGATTGATTATAGAAGATTATAGAAAAATTTTAAAAGAAAGTATACAACAAAGAACCGCTTTGATTGTAA AAGATGAAACTAAAGCAATTGGAGTATTAATATTTTCCTATGAAAACAAGGAAATTGCTTTTCTTGCAGTGCATCCACAA TACAGAAAAGAAGGTATAGCTACTGGCCTATTTAATAAAATGTATAATCAATTTCCAAAAGGCACAGAAATTACAGTAAC TACATATAGAAAAAATGATACTAAAGGAAAAGCTGCAAGAGCATTATATAAAAGATTAGGATTTATTGAAGATGAACTAA TTATGGAATTTGGGTACCCATGTCAAAGATTCATTTTTAACAAGAACTAA
Upstream 100 bases:
>100_bases AATATATTGAAATTAATATTTATAATGTATAAACTTAAAATATAATTTAGTATACATATGTAAAATATGAAAAATATTAT TATGGAAAGTGTGAATAATA
Downstream 100 bases:
>100_bases ATTTTACTTATATTTATAAACTCCTAAAAATATACACTATATAAAATTTTCACGGAGGATAGTAATATGCAGGAACTAAA ATTAATTTTCCCCAAGAAAC
Product: AraC family transcription regulator
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Transcriptional Regulator AraC Family; Transcriptional Regulator; AraC-Family Transcriptional Regulator; NUDIX Hydrolase
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MRNKIIADFAKEVDIDIWMNLVEIVKEDFPGLIIEDYRKILKESIQQRTALIVKDETKAIGVLIFSYENKEIAFLAVHPQ YRKEGIATGLFNKMYNQFPKGTEITVTTYRKNDTKGKAARALYKRLGFIEDELIMEFGYPCQRFIFNKN
Sequences:
>Translated_149_residues MRNKIIADFAKEVDIDIWMNLVEIVKEDFPGLIIEDYRKILKESIQQRTALIVKDETKAIGVLIFSYENKEIAFLAVHPQ YRKEGIATGLFNKMYNQFPKGTEITVTTYRKNDTKGKAARALYKRLGFIEDELIMEFGYPCQRFIFNKN >Mature_149_residues MRNKIIADFAKEVDIDIWMNLVEIVKEDFPGLIIEDYRKILKESIQQRTALIVKDETKAIGVLIFSYENKEIAFLAVHPQ YRKEGIATGLFNKMYNQFPKGTEITVTTYRKNDTKGKAARALYKRLGFIEDELIMEFGYPCQRFIFNKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17438; Mature: 17438
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNKIIADFAKEVDIDIWMNLVEIVKEDFPGLIIEDYRKILKESIQQRTALIVKDETKAI CCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCEE GVLIFSYENKEIAFLAVHPQYRKEGIATGLFNKMYNQFPKGTEITVTTYRKNDTKGKAAR EEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHH ALYKRLGFIEDELIMEFGYPCQRFIFNKN HHHHHHCCCHHHHHHHHCCCHHHHCCCCC >Mature Secondary Structure MRNKIIADFAKEVDIDIWMNLVEIVKEDFPGLIIEDYRKILKESIQQRTALIVKDETKAI CCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCEE GVLIFSYENKEIAFLAVHPQYRKEGIATGLFNKMYNQFPKGTEITVTTYRKNDTKGKAAR EEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHH ALYKRLGFIEDELIMEFGYPCQRFIFNKN HHHHHHCCCHHHHHHHHCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA