| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754889
Identifier: 170754889
GI number: 170754889
Start: 2060127
End: 2060978
Strand: Reverse
Name: 170754889
Synonym: CLD_2697
Alternate gene names: NA
Gene position: 2060978-2060127 (Counterclockwise)
Preceding gene: 170755143
Following gene: 170757145
Centisome position: 52.07
GC content: 26.76
Gene sequence:
>852_bases ATGGAGATCTTTAAAAGTGAGTTTGAAAGGCTGTGGAAGAACAAATTAACTTTATTTTGTTTTATACTTCTCCCTCTTGC TATAGTAGGATCTTCAAAATATTACCTTGGAAATAATTTGAAATTACCTGTAACTAGTGCTGAGTATACTTCCTTTGGCA ACTATTCTTTTATGATGTTTCAGGAAATGTTAGCTACTTTATTTAATTTTATTGCTATCTTACTTGTATGTATATCTATT ACTGAAGAATATAGAAAGGGTCAAATCAGATTAATCATGATAAGAGGTTATTCTTTTAGAGAAATATATTTCGCTAAAGT AGCCTCTATCGTGTCTACAATGTTTATATTCTTTGTAGTGTATTTTATATTGTCTACAGCAATTGGATATTTTATAGCGC CTAAATTATATGAAATAAAGCTTTTTTATTATAGTGGTACCGTAAGTAATTTAAAGGCGATTTTTTATTCTTTAAAATAT TATGCCTTAGGATTTCTAACTGTTTTAGCAATACTTTCTGTATTTACTCTTTTTTCAGTAATTTTTAAGAGTTCTACAGG AACTATATCTTCATGTATATGTTTTTTAGTAGGGAGCTTTATTTTCTCAGAAGTTACTATGCATTGTGGAATTATGTTAA CTAGAAATCCACATAATGGTATCAATCTTATTAAAATAATCGAAAAACTATATTTAATCACTATTCCTAAGATTCAACAT ATTGGTATATGTCTGGTTTTAGCTGAACATCCTGTATTAAATTATTGGATCTTAAGTATATTAGCAGCCTATATAATTAT ATTTACATCTGTTACTTGTGCTATATTTTCTAAAAGAGATAATTTTATTTAA
Upstream 100 bases:
>100_bases TAAAATTTAAAGGATCTTTAGAAAAATTACTTTCCATGGGGGATGGTAATATTGAAGAGGTGTTTTTGCAAGTATTAAAA ACTAAGGAGGTAGCTTTATA
Downstream 100 bases:
>100_bases TTTTCTAAGTTTTAGATAGATATAGGATATTTAACAGCAAGACTACAGCTTAAATTAAGAATTATTCTATATCTAAAAAG ATTCTTATTATACAATGGAA
Product: ABC transporter, permease protein
Products: NA
Alternate protein names: Abc Transporter Permease Protein
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MEIFKSEFERLWKNKLTLFCFILLPLAIVGSSKYYLGNNLKLPVTSAEYTSFGNYSFMMFQEMLATLFNFIAILLVCISI TEEYRKGQIRLIMIRGYSFREIYFAKVASIVSTMFIFFVVYFILSTAIGYFIAPKLYEIKLFYYSGTVSNLKAIFYSLKY YALGFLTVLAILSVFTLFSVIFKSSTGTISSCICFLVGSFIFSEVTMHCGIMLTRNPHNGINLIKIIEKLYLITIPKIQH IGICLVLAEHPVLNYWILSILAAYIIIFTSVTCAIFSKRDNFI
Sequences:
>Translated_283_residues MEIFKSEFERLWKNKLTLFCFILLPLAIVGSSKYYLGNNLKLPVTSAEYTSFGNYSFMMFQEMLATLFNFIAILLVCISI TEEYRKGQIRLIMIRGYSFREIYFAKVASIVSTMFIFFVVYFILSTAIGYFIAPKLYEIKLFYYSGTVSNLKAIFYSLKY YALGFLTVLAILSVFTLFSVIFKSSTGTISSCICFLVGSFIFSEVTMHCGIMLTRNPHNGINLIKIIEKLYLITIPKIQH IGICLVLAEHPVLNYWILSILAAYIIIFTSVTCAIFSKRDNFI >Mature_283_residues MEIFKSEFERLWKNKLTLFCFILLPLAIVGSSKYYLGNNLKLPVTSAEYTSFGNYSFMMFQEMLATLFNFIAILLVCISI TEEYRKGQIRLIMIRGYSFREIYFAKVASIVSTMFIFFVVYFILSTAIGYFIAPKLYEIKLFYYSGTVSNLKAIFYSLKY YALGFLTVLAILSVFTLFSVIFKSSTGTISSCICFLVGSFIFSEVTMHCGIMLTRNPHNGINLIKIIEKLYLITIPKIQH IGICLVLAEHPVLNYWILSILAAYIIIFTSVTCAIFSKRDNFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32463; Mature: 32463
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIFKSEFERLWKNKLTLFCFILLPLAIVGSSKYYLGNNLKLPVTSAEYTSFGNYSFMMF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEECCCCCCCCCCHHHHHH QEMLATLFNFIAILLVCISITEEYRKGQIRLIMIRGYSFREIYFAKVASIVSTMFIFFVV HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH YFILSTAIGYFIAPKLYEIKLFYYSGTVSNLKAIFYSLKYYALGFLTVLAILSVFTLFSV HHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFKSSTGTISSCICFLVGSFIFSEVTMHCGIMLTRNPHNGINLIKIIEKLYLITIPKIQH HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHCCCCHHH IGICLVLAEHPVLNYWILSILAAYIIIFTSVTCAIFSKRDNFI CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MEIFKSEFERLWKNKLTLFCFILLPLAIVGSSKYYLGNNLKLPVTSAEYTSFGNYSFMMF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEECCCCCCCCCCHHHHHH QEMLATLFNFIAILLVCISITEEYRKGQIRLIMIRGYSFREIYFAKVASIVSTMFIFFVV HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH YFILSTAIGYFIAPKLYEIKLFYYSGTVSNLKAIFYSLKYYALGFLTVLAILSVFTLFSV HHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFKSSTGTISSCICFLVGSFIFSEVTMHCGIMLTRNPHNGINLIKIIEKLYLITIPKIQH HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHCCCCHHH IGICLVLAEHPVLNYWILSILAAYIIIFTSVTCAIFSKRDNFI CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA