| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757145
Identifier: 170757145
GI number: 170757145
Start: 2059189
End: 2059965
Strand: Reverse
Name: 170757145
Synonym: CLD_2698
Alternate gene names: NA
Gene position: 2059965-2059189 (Counterclockwise)
Preceding gene: 170754889
Following gene: 170756166
Centisome position: 52.04
GC content: 26.0
Gene sequence:
>777_bases ATGAAAGAGTTAATTATTAGCGAATTTTTAAGAATGAGAGGCAGAAGAAAGAATAAAGCCTCTTTTATTATAGTTTTAGT TAATTTTATATTTAGTATTTCTTGGTATAAAACCTTTGGAGAAGGTACGGGTGTTTATACTCCAGGTATATCTACTAAGA TAAATTCTCTGAATTTACCTATTTTTGTAATGAAAGATTTAGCATCAATTCTATTTTTAATAGTTCTTCCAATGCTTTTC ATAGATAGTTTAAGTGGAGAGTACGAATCTGGTGCTTATAGACTTATATTAATAAGACCATATAGTAAAATTAAGTTATG GTTTTCTAAGTTGATAGCTCAAAGTTTATTTTCATTAGTTATACTTGTTGTATTTTTTATTATTTCTGTAATTAGCGGCT ATATTTTATTTCCTAAGGTAACTATAACTAACTTTTACAATATACCTAAAGTTTATGATAAATTAGGAGCTTTTATATAT AATTTTAAAGTTGTAGCACTGATGTACTTTGTAAGTATTGCAATTTTAGCTTTAGCTTCTTTAATTTCCTCAATAGTGTC TAAGTCTGTGGCGGCCTTTTTAATTGTTATATCTTTCTTAATAGCAGGGATATATATAGGACATGGATTACAAGTTATAT TTTTGCCTTTTCATAATATAATTAAAGTTTTAAGTTTAGGAAAAAGAGCTGATTTTTATATACCAGTTGTATCCTGTTTA CTTATATGCAGCTTTTTAAGTACATTGATTTTTATTAGGAAAGATTTGAAATGTTAA
Upstream 100 bases:
>100_bases TTATTCTATATCTAAAAAGATTCTTATTATACAATGGAAAGGAAGTGAATACTTAGTGAGTATTTATATTTATAATATAC ACTCTCACTAAAGATAATTT
Downstream 100 bases:
>100_bases AAAATAAAGCATAAGCATAGTTTATGTTATTGCTATATTTTTTATACTTTCATACTACTCGATTTAAGATATATAAACTA AATTAGTATTTTATATATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MKELIISEFLRMRGRRKNKASFIIVLVNFIFSISWYKTFGEGTGVYTPGISTKINSLNLPIFVMKDLASILFLIVLPMLF IDSLSGEYESGAYRLILIRPYSKIKLWFSKLIAQSLFSLVILVVFFIISVISGYILFPKVTITNFYNIPKVYDKLGAFIY NFKVVALMYFVSIAILALASLISSIVSKSVAAFLIVISFLIAGIYIGHGLQVIFLPFHNIIKVLSLGKRADFYIPVVSCL LICSFLSTLIFIRKDLKC
Sequences:
>Translated_258_residues MKELIISEFLRMRGRRKNKASFIIVLVNFIFSISWYKTFGEGTGVYTPGISTKINSLNLPIFVMKDLASILFLIVLPMLF IDSLSGEYESGAYRLILIRPYSKIKLWFSKLIAQSLFSLVILVVFFIISVISGYILFPKVTITNFYNIPKVYDKLGAFIY NFKVVALMYFVSIAILALASLISSIVSKSVAAFLIVISFLIAGIYIGHGLQVIFLPFHNIIKVLSLGKRADFYIPVVSCL LICSFLSTLIFIRKDLKC >Mature_258_residues MKELIISEFLRMRGRRKNKASFIIVLVNFIFSISWYKTFGEGTGVYTPGISTKINSLNLPIFVMKDLASILFLIVLPMLF IDSLSGEYESGAYRLILIRPYSKIKLWFSKLIAQSLFSLVILVVFFIISVISGYILFPKVTITNFYNIPKVYDKLGAFIY NFKVVALMYFVSIAILALASLISSIVSKSVAAFLIVISFLIAGIYIGHGLQVIFLPFHNIIKVLSLGKRADFYIPVVSCL LICSFLSTLIFIRKDLKC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29138; Mature: 29138
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKELIISEFLRMRGRRKNKASFIIVLVNFIFSISWYKTFGEGTGVYTPGISTKINSLNLP CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCH IFVMKDLASILFLIVLPMLFIDSLSGEYESGAYRLILIRPYSKIKLWFSKLIAQSLFSLV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH ILVVFFIISVISGYILFPKVTITNFYNIPKVYDKLGAFIYNFKVVALMYFVSIAILALAS HHHHHHHHHHHCCHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LISSIVSKSVAAFLIVISFLIAGIYIGHGLQVIFLPFHNIIKVLSLGKRADFYIPVVSCL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHCCCCCCHHHHHHHHH LICSFLSTLIFIRKDLKC HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKELIISEFLRMRGRRKNKASFIIVLVNFIFSISWYKTFGEGTGVYTPGISTKINSLNLP CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCH IFVMKDLASILFLIVLPMLFIDSLSGEYESGAYRLILIRPYSKIKLWFSKLIAQSLFSLV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH ILVVFFIISVISGYILFPKVTITNFYNIPKVYDKLGAFIYNFKVVALMYFVSIAILALAS HHHHHHHHHHHCCHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LISSIVSKSVAAFLIVISFLIAGIYIGHGLQVIFLPFHNIIKVLSLGKRADFYIPVVSCL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHCCCCCCHHHHHHHHH LICSFLSTLIFIRKDLKC HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA