| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754887
Identifier: 170754887
GI number: 170754887
Start: 2277364
End: 2279523
Strand: Reverse
Name: 170754887
Synonym: CLD_2499
Alternate gene names: NA
Gene position: 2279523-2277364 (Counterclockwise)
Preceding gene: 170757642
Following gene: 170756758
Centisome position: 57.59
GC content: 33.1
Gene sequence:
>2160_bases ATGATATTAACTATGCTTTGCCCAATGGCTGGATATAGACTATACAATAATGGCATGCTTAATGGAACGTTAAGCGGCAA ATTTATTGGAAATCCATCTATTGCTGGAGCGGTAGGTGGAGGGATTTTATTTGCAATACTAACCCTATTAGAGTTCAATA GAGTGCATAAATATGAAATAGAAGGACTAACAAATAGTATTGTATCCCCCTTGCTACTAAATGTGGGGAGATTACTTACC ATAGGAATAGCGGCCACTGTTACTGTTTCTATTACTTCAGTCCTTTATTATCCATATACAGTTATAAAAATGGGTAATGT TTTTGATGGATATACCTACTTAAATAGCTTCTTTCTTTTGATGCTTCCATCTGTACTACTATCAATTTTAGCAGCTTCTG CATTTTATCAGATTTTCTATCGTGTAGATCTTAGTATGGCTGCATTTATTCTATTGATGCTGCCAAATTTAATTGAAAAT CTGCCTATTGGAAATATTCTGCATTGGATAAGACCTTCAGTTCCAGCAATGTCAGACTATTTTAGTAATACACAAATATT TCGTTTAATGAAGCATAATAGACTATTTTGGTTTTTGATATTTGGTGGTTTGTGGCTAATTGGGTTGCTAAGTGTACGAT GCTATGGCAAGAGAATATTTGGCTCTATGCGTTATAATTCAAGAAAAGTTTATATTCCTTTAATTGCTGTAGCAATGATT GGTGGTGGATGCTATGCTTTTATAAATCAACCTAATGTTTTTCTGATATCTAAAGAAGGAATTCTTGAAATGATTAATAG TGATTCAGAAGATAGTTCTGATAAGATGAATAAAGAGATTCAGTTGTTAAACAGTGATTTGAAAATTTCATTTGATGGAA GTAAAGGAAGTCTTTCTGGGAAGGCAGTATACTCACTTGAAAATTTGAGTAGCAGTAAACAGGAATGTAGATTTACAATA AATCCAGGATACACCATTCATAAAATAGTTGTAAATGATAAAAAGGTCACATTTAAAAAATTAGAAAACATAAGAAATAA TATTATATTTAATGTACCTAAGGAAAAGAATATTAAGCTCACTATAGAATATGAGGGAAGACCTAAAGTCCTATATTTCT TGAGTGATTTTATTTTGGATAGTAATATTAGCGACAAATATATAGATTTAGACAGTGGTTTTATTCCTAATATAAAAGTA GCAAATAGCAAGAATAATTCTGAACTTACATGTCAGCTTACCATGCCCTCTGGGCTTATGCCAGTAGTGAATCCAGTGCA AAAGGATGAGAGTGGTGAAGCAGTAGCAAACTTAACTGGTGATACTACGTTACTTTTAGAGGATGGGTATAACAAAACAT GGCTTATTCATCTTAGGGGGACTCGGTTCTCTTTAATGGCTGGTGATTATGTTATGAAGCAGCTCAGTAATGAAGAAATG CCCATAAACTTTTATTATAGCAGTAAACATGAGGATACTATGAAAAATATGAGTGCTGAAAAAGTAATGAAGGATACTAT TGATTATTGTATTAGTCATTATGGCAAGTTAAATAATGTTGCTAAAAATTCACCCTTAAAAATAGTAGAAAAAACAGCTT TATTCCCAGGAGGACTAGCATATCCTAATTACAGTACCATAGGAGAATTCTGTTTTAATGATGAAAATTTAAGTGATAAA TCAAAGGGAGCATCTGCTGCTGAAACACTGGCTCATGAACTTGCTCATCAGTGGTGGGGAGTGCAAACTGTAGGTTCAGG TGGCAATAATAGAAACTGGTCAGCGGAAGGGCTTGCTGTTTATACAACTTACCGAGTTGCTAAGAAAACCCATGGAGAAG AATATGCCAAAAAAAATTATGTGGACATATGGAGGGCTCGTGTGAAAGAAGATAATAATAATTTTTATACTAGACATCCA GAATATTTAAAAATATTGCCCAAAAGGTATGTTCGAGATATTGATGACAATGATAGAACTTTGCGATTATACTCAAAATT ACCTCTTCAAATTTTGAAAGCCTCAAAGTTAGTCGGGGGCGAAGATAAAATGGATGAAATTTTAGCTAAATTATATAAAA ATAAATCAAAAACACAAATTACATGGCAGGATTTTCTAAATGCTTGTGGGCTAAAAGGGGAGGAGTTAAAACTTGAATAG
Upstream 100 bases:
>100_bases ATCTTATTATGGAGAAAGAGGTGTAATAGTCATGAATTTCTTTTCCTATTTAAGGGTGGAATTAAATCGTATTTTCCATT CGAAAATTGTTTATTTAATT
Downstream 100 bases:
>100_bases AATATTTAAATATGAACTTAAAAGGCTGATTATAAATAAATTTTTCTTAGGATTACTTATTATTTCTGCTTTGTATAGCC ATGAAATTATGCGTGGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 719; Mature: 719
Protein sequence:
>719_residues MILTMLCPMAGYRLYNNGMLNGTLSGKFIGNPSIAGAVGGGILFAILTLLEFNRVHKYEIEGLTNSIVSPLLLNVGRLLT IGIAATVTVSITSVLYYPYTVIKMGNVFDGYTYLNSFFLLMLPSVLLSILAASAFYQIFYRVDLSMAAFILLMLPNLIEN LPIGNILHWIRPSVPAMSDYFSNTQIFRLMKHNRLFWFLIFGGLWLIGLLSVRCYGKRIFGSMRYNSRKVYIPLIAVAMI GGGCYAFINQPNVFLISKEGILEMINSDSEDSSDKMNKEIQLLNSDLKISFDGSKGSLSGKAVYSLENLSSSKQECRFTI NPGYTIHKIVVNDKKVTFKKLENIRNNIIFNVPKEKNIKLTIEYEGRPKVLYFLSDFILDSNISDKYIDLDSGFIPNIKV ANSKNNSELTCQLTMPSGLMPVVNPVQKDESGEAVANLTGDTTLLLEDGYNKTWLIHLRGTRFSLMAGDYVMKQLSNEEM PINFYYSSKHEDTMKNMSAEKVMKDTIDYCISHYGKLNNVAKNSPLKIVEKTALFPGGLAYPNYSTIGEFCFNDENLSDK SKGASAAETLAHELAHQWWGVQTVGSGGNNRNWSAEGLAVYTTYRVAKKTHGEEYAKKNYVDIWRARVKEDNNNFYTRHP EYLKILPKRYVRDIDDNDRTLRLYSKLPLQILKASKLVGGEDKMDEILAKLYKNKSKTQITWQDFLNACGLKGEELKLE
Sequences:
>Translated_719_residues MILTMLCPMAGYRLYNNGMLNGTLSGKFIGNPSIAGAVGGGILFAILTLLEFNRVHKYEIEGLTNSIVSPLLLNVGRLLT IGIAATVTVSITSVLYYPYTVIKMGNVFDGYTYLNSFFLLMLPSVLLSILAASAFYQIFYRVDLSMAAFILLMLPNLIEN LPIGNILHWIRPSVPAMSDYFSNTQIFRLMKHNRLFWFLIFGGLWLIGLLSVRCYGKRIFGSMRYNSRKVYIPLIAVAMI GGGCYAFINQPNVFLISKEGILEMINSDSEDSSDKMNKEIQLLNSDLKISFDGSKGSLSGKAVYSLENLSSSKQECRFTI NPGYTIHKIVVNDKKVTFKKLENIRNNIIFNVPKEKNIKLTIEYEGRPKVLYFLSDFILDSNISDKYIDLDSGFIPNIKV ANSKNNSELTCQLTMPSGLMPVVNPVQKDESGEAVANLTGDTTLLLEDGYNKTWLIHLRGTRFSLMAGDYVMKQLSNEEM PINFYYSSKHEDTMKNMSAEKVMKDTIDYCISHYGKLNNVAKNSPLKIVEKTALFPGGLAYPNYSTIGEFCFNDENLSDK SKGASAAETLAHELAHQWWGVQTVGSGGNNRNWSAEGLAVYTTYRVAKKTHGEEYAKKNYVDIWRARVKEDNNNFYTRHP EYLKILPKRYVRDIDDNDRTLRLYSKLPLQILKASKLVGGEDKMDEILAKLYKNKSKTQITWQDFLNACGLKGEELKLE >Mature_719_residues MILTMLCPMAGYRLYNNGMLNGTLSGKFIGNPSIAGAVGGGILFAILTLLEFNRVHKYEIEGLTNSIVSPLLLNVGRLLT IGIAATVTVSITSVLYYPYTVIKMGNVFDGYTYLNSFFLLMLPSVLLSILAASAFYQIFYRVDLSMAAFILLMLPNLIEN LPIGNILHWIRPSVPAMSDYFSNTQIFRLMKHNRLFWFLIFGGLWLIGLLSVRCYGKRIFGSMRYNSRKVYIPLIAVAMI GGGCYAFINQPNVFLISKEGILEMINSDSEDSSDKMNKEIQLLNSDLKISFDGSKGSLSGKAVYSLENLSSSKQECRFTI NPGYTIHKIVVNDKKVTFKKLENIRNNIIFNVPKEKNIKLTIEYEGRPKVLYFLSDFILDSNISDKYIDLDSGFIPNIKV ANSKNNSELTCQLTMPSGLMPVVNPVQKDESGEAVANLTGDTTLLLEDGYNKTWLIHLRGTRFSLMAGDYVMKQLSNEEM PINFYYSSKHEDTMKNMSAEKVMKDTIDYCISHYGKLNNVAKNSPLKIVEKTALFPGGLAYPNYSTIGEFCFNDENLSDK SKGASAAETLAHELAHQWWGVQTVGSGGNNRNWSAEGLAVYTTYRVAKKTHGEEYAKKNYVDIWRARVKEDNNNFYTRHP EYLKILPKRYVRDIDDNDRTLRLYSKLPLQILKASKLVGGEDKMDEILAKLYKNKSKTQITWQDFLNACGLKGEELKLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81119; Mature: 81119
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILTMLCPMAGYRLYNNGMLNGTLSGKFIGNPSIAGAVGGGILFAILTLLEFNRVHKYEI CEEEEECCHHCCEEECCCEEECEECCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE EGLTNSIVSPLLLNVGRLLTIGIAATVTVSITSVLYYPYTVIKMGNVFDGYTYLNSFFLL CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHH MLPSVLLSILAASAFYQIFYRVDLSMAAFILLMLPNLIENLPIGNILHWIRPSVPAMSDY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHH FSNTQIFRLMKHNRLFWFLIFGGLWLIGLLSVRCYGKRIFGSMRYNSRKVYIPLIAVAMI HCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHH GGGCYAFINQPNVFLISKEGILEMINSDSEDSSDKMNKEIQLLNSDLKISFDGSKGSLSG CCCEEEEECCCCEEEEECCCHHHHHCCCCCCCHHHHHHHHEEECCCEEEEECCCCCCCCC KAVYSLENLSSSKQECRFTINPGYTIHKIVVNDKKVTFKKLENIRNNIIFNVPKEKNIKL CEEEEEHHCCCCCCCCEEEECCCCEEEEEEECCCCHHHHHHHHHHCCEEEECCCCCCEEE TIEYEGRPKVLYFLSDFILDSNISDKYIDLDSGFIPNIKVANSKNNSELTCQLTMPSGLM EEEECCCCCEEEEEHHHHHCCCCCCCEEECCCCCCCCEEEECCCCCCEEEEEEECCCCCC PVVNPVQKDESGEAVANLTGDTTLLLEDGYNKTWLIHLRGTRFSLMAGDYVMKQLSNEEM HHCCCCCCCCCCCEEEECCCCEEEEEECCCCEEEEEEECCCEEEEHHHHHHHHHHCCCCC PINFYYSSKHEDTMKNMSAEKVMKDTIDYCISHYGKLNNVAKNSPLKIVEKTALFPGGLA CEEEEECCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCC YPNYSTIGEFCFNDENLSDKSKGASAAETLAHELAHQWWGVQTVGSGGNNRNWSAEGLAV CCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEE YTTYRVAKKTHGEEYAKKNYVDIWRARVKEDNNNFYTRHPEYLKILPKRYVRDIDDNDRT EEEEHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCCCCCCCE LRLYSKLPLQILKASKLVGGEDKMDEILAKLYKNKSKTQITWQDFLNACGLKGEELKLE EEEEHHCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCEECC >Mature Secondary Structure MILTMLCPMAGYRLYNNGMLNGTLSGKFIGNPSIAGAVGGGILFAILTLLEFNRVHKYEI CEEEEECCHHCCEEECCCEEECEECCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE EGLTNSIVSPLLLNVGRLLTIGIAATVTVSITSVLYYPYTVIKMGNVFDGYTYLNSFFLL CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHH MLPSVLLSILAASAFYQIFYRVDLSMAAFILLMLPNLIENLPIGNILHWIRPSVPAMSDY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHH FSNTQIFRLMKHNRLFWFLIFGGLWLIGLLSVRCYGKRIFGSMRYNSRKVYIPLIAVAMI HCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHH GGGCYAFINQPNVFLISKEGILEMINSDSEDSSDKMNKEIQLLNSDLKISFDGSKGSLSG CCCEEEEECCCCEEEEECCCHHHHHCCCCCCCHHHHHHHHEEECCCEEEEECCCCCCCCC KAVYSLENLSSSKQECRFTINPGYTIHKIVVNDKKVTFKKLENIRNNIIFNVPKEKNIKL CEEEEEHHCCCCCCCCEEEECCCCEEEEEEECCCCHHHHHHHHHHCCEEEECCCCCCEEE TIEYEGRPKVLYFLSDFILDSNISDKYIDLDSGFIPNIKVANSKNNSELTCQLTMPSGLM EEEECCCCCEEEEEHHHHHCCCCCCCEEECCCCCCCCEEEECCCCCCEEEEEEECCCCCC PVVNPVQKDESGEAVANLTGDTTLLLEDGYNKTWLIHLRGTRFSLMAGDYVMKQLSNEEM HHCCCCCCCCCCCEEEECCCCEEEEEECCCCEEEEEEECCCEEEEHHHHHHHHHHCCCCC PINFYYSSKHEDTMKNMSAEKVMKDTIDYCISHYGKLNNVAKNSPLKIVEKTALFPGGLA CEEEEECCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCC YPNYSTIGEFCFNDENLSDKSKGASAAETLAHELAHQWWGVQTVGSGGNNRNWSAEGLAV CCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEE YTTYRVAKKTHGEEYAKKNYVDIWRARVKEDNNNFYTRHPEYLKILPKRYVRDIDDNDRT EEEEHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCCCCCCCE LRLYSKLPLQILKASKLVGGEDKMDEILAKLYKNKSKTQITWQDFLNACGLKGEELKLE EEEEHHCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA