Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170756758

Identifier: 170756758

GI number: 170756758

Start: 2276661

End: 2277371

Strand: Reverse

Name: 170756758

Synonym: CLD_2500

Alternate gene names: NA

Gene position: 2277371-2276661 (Counterclockwise)

Preceding gene: 170754887

Following gene: 170757103

Centisome position: 57.54

GC content: 35.44

Gene sequence:

>711_bases
TTGAATAGAATATTTAAATATGAACTTAAAAGGCTGATTATAAATAAATTTTTCTTAGGATTACTTATTATTTCTGCTTT
GTATAGCCATGAAATTATGCGTGGAGAAATAATTCTTGGGGTTTCAAATACTGCCCCATTCTCTGGCTGGAGCTATGGAA
CATACCTTGCTAAAGTGTTGCCAATATTGCTTGTTACACTGCTGTTTTTTATATCTTTTCTTTATCAAAAACGGGAAAAG
AGCGTACAGGTGTTAACTAAAGCAACCCCTATTGACCCGTTTAAGTTTCAAATGCTCCGCTTTGGAACTATAATTGTAGG
CTTTGTTCTAATTTCTGCAGTGCCTATTGTTTATAGCTTGTGCTTCTATGCTGTGAATTTTCACTTTACTAATTTTGGAA
AGCTTGTGTTGCCAGCAGTCATAACACTGCTACCAGCTATGTTGTTTGTGTTTGGTTTAGGAACTCTTGGAGGAAGGTAT
CACCAGGGAGTAGTTTTTGTACTTATGGCAGCGGTGATGTTAGTAAGTTTCATTCCATTGCCATATGCAGTTGATTTATT
TGGAGGAAACTTCTTTACAAAATATCCAGAATCTCTTGATTTAGTTGAACCAGCATTCTCAATACCTGTAAGCGTAGTAA
TTGGAAAGTTTATGTATGGACTAACTGGTATTGGGATGGTGCTCTTATCTGGTATTCAAAAGAAAAAGTAA

Upstream 100 bases:

>100_bases
GATGAAATTTTAGCTAAATTATATAAAAATAAATCAAAAACACAAATTACATGGCAGGATTTTCTAAATGCTTGTGGGCT
AAAAGGGGAGGAGTTAAAAC

Downstream 100 bases:

>100_bases
GTACTTTATTGAAATAATCTTTTCAACAGCTTGTTATAACAACTGTAGGCAGTTTGTTTTATGTAAAATATGAGGATATT
AATTAAAAAATATGGTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MNRIFKYELKRLIINKFFLGLLIISALYSHEIMRGEIILGVSNTAPFSGWSYGTYLAKVLPILLVTLLFFISFLYQKREK
SVQVLTKATPIDPFKFQMLRFGTIIVGFVLISAVPIVYSLCFYAVNFHFTNFGKLVLPAVITLLPAMLFVFGLGTLGGRY
HQGVVFVLMAAVMLVSFIPLPYAVDLFGGNFFTKYPESLDLVEPAFSIPVSVVIGKFMYGLTGIGMVLLSGIQKKK

Sequences:

>Translated_236_residues
MNRIFKYELKRLIINKFFLGLLIISALYSHEIMRGEIILGVSNTAPFSGWSYGTYLAKVLPILLVTLLFFISFLYQKREK
SVQVLTKATPIDPFKFQMLRFGTIIVGFVLISAVPIVYSLCFYAVNFHFTNFGKLVLPAVITLLPAMLFVFGLGTLGGRY
HQGVVFVLMAAVMLVSFIPLPYAVDLFGGNFFTKYPESLDLVEPAFSIPVSVVIGKFMYGLTGIGMVLLSGIQKKK
>Mature_236_residues
MNRIFKYELKRLIINKFFLGLLIISALYSHEIMRGEIILGVSNTAPFSGWSYGTYLAKVLPILLVTLLFFISFLYQKREK
SVQVLTKATPIDPFKFQMLRFGTIIVGFVLISAVPIVYSLCFYAVNFHFTNFGKLVLPAVITLLPAMLFVFGLGTLGGRY
HQGVVFVLMAAVMLVSFIPLPYAVDLFGGNFFTKYPESLDLVEPAFSIPVSVVIGKFMYGLTGIGMVLLSGIQKKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26366; Mature: 26366

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRIFKYELKRLIINKFFLGLLIISALYSHEIMRGEIILGVSNTAPFSGWSYGTYLAKVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHH
PILLVTLLFFISFLYQKREKSVQVLTKATPIDPFKFQMLRFGTIIVGFVLISAVPIVYSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CFYAVNFHFTNFGKLVLPAVITLLPAMLFVFGLGTLGGRYHQGVVFVLMAAVMLVSFIPL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
PYAVDLFGGNFFTKYPESLDLVEPAFSIPVSVVIGKFMYGLTGIGMVLLSGIQKKK
CHHHHHHCCCHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNRIFKYELKRLIINKFFLGLLIISALYSHEIMRGEIILGVSNTAPFSGWSYGTYLAKVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHH
PILLVTLLFFISFLYQKREKSVQVLTKATPIDPFKFQMLRFGTIIVGFVLISAVPIVYSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CFYAVNFHFTNFGKLVLPAVITLLPAMLFVFGLGTLGGRYHQGVVFVLMAAVMLVSFIPL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
PYAVDLFGGNFFTKYPESLDLVEPAFSIPVSVVIGKFMYGLTGIGMVLLSGIQKKK
CHHHHHHCCCHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA