| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754801
Identifier: 170754801
GI number: 170754801
Start: 585332
End: 585814
Strand: Reverse
Name: 170754801
Synonym: CLD_0273
Alternate gene names: NA
Gene position: 585814-585332 (Counterclockwise)
Preceding gene: 170757001
Following gene: 170755892
Centisome position: 14.8
GC content: 24.84
Gene sequence:
>483_bases ATGAAAGAAACTTTTTCAATAAAATTTATTAAAGTAATTTTAATGATTTTAATATTTGGTTGTACATGTATGCTTTGGAA ATATGGTTTTATGACTTTATTTGCTCCAGAAAAAATACCTGATGGTTTTCCTAATATTATACTTTTCCTATTTACCACTG GAGTTTATATTGTTGTTGCATGGAATCTCTTAAAGATTGTGTTTAGTATAGACTCTACCCCTTTTTCCTTAAAAAATGTT AAAAACTTTAAAATAATAGGTTATCTTATGTTATTTTTATCTCTTATAGATGCCATAGAGAGTATAGTAAATTTTAAAAA ATCAGATGATCTTGTGGCTTTAGGTATTATTTTAGATAAGGGAATTGTTGGTATTAGACCAAGTTGTATTTTATATTTAG TGTTAGGTATTATGGCTTTAGTTTTGGCTGAGATTTTTAAAAAAGCTGTCAAAATAAAAGATGAAAATGATTTAACAATA TAA
Upstream 100 bases:
>100_bases ATATTATTGACACACAATAAGATATGCTGTATATTATAATTGTAAAATACAAAATTTTCTAGTTCATCCATATAAAAACA TAGATAGGAGTAATTTATTT
Downstream 100 bases:
>100_bases CACAGGATAGGAGATTTTGTATGGGAATTATAGTTAATCTCGATGTTATAATGGCAAAACGAAAGATGTCTCTTAAAGAA TTAGCTGAAAAAATTAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MKETFSIKFIKVILMILIFGCTCMLWKYGFMTLFAPEKIPDGFPNIILFLFTTGVYIVVAWNLLKIVFSIDSTPFSLKNV KNFKIIGYLMLFLSLIDAIESIVNFKKSDDLVALGIILDKGIVGIRPSCILYLVLGIMALVLAEIFKKAVKIKDENDLTI
Sequences:
>Translated_160_residues MKETFSIKFIKVILMILIFGCTCMLWKYGFMTLFAPEKIPDGFPNIILFLFTTGVYIVVAWNLLKIVFSIDSTPFSLKNV KNFKIIGYLMLFLSLIDAIESIVNFKKSDDLVALGIILDKGIVGIRPSCILYLVLGIMALVLAEIFKKAVKIKDENDLTI >Mature_160_residues MKETFSIKFIKVILMILIFGCTCMLWKYGFMTLFAPEKIPDGFPNIILFLFTTGVYIVVAWNLLKIVFSIDSTPFSLKNV KNFKIIGYLMLFLSLIDAIESIVNFKKSDDLVALGIILDKGIVGIRPSCILYLVLGIMALVLAEIFKKAVKIKDENDLTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18067; Mature: 18067
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKETFSIKFIKVILMILIFGCTCMLWKYGFMTLFAPEKIPDGFPNIILFLFTTGVYIVVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHH WNLLKIVFSIDSTPFSLKNVKNFKIIGYLMLFLSLIDAIESIVNFKKSDDLVALGIILDK HHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHC GIVGIRPSCILYLVLGIMALVLAEIFKKAVKIKDENDLTI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKETFSIKFIKVILMILIFGCTCMLWKYGFMTLFAPEKIPDGFPNIILFLFTTGVYIVVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHH WNLLKIVFSIDSTPFSLKNVKNFKIIGYLMLFLSLIDAIESIVNFKKSDDLVALGIILDK HHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHC GIVGIRPSCILYLVLGIMALVLAEIFKKAVKIKDENDLTI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA