| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is yozG [H]
Identifier: 170755892
GI number: 170755892
Start: 585072
End: 585311
Strand: Reverse
Name: yozG [H]
Synonym: CLD_0274
Alternate gene names: 170755892
Gene position: 585311-585072 (Counterclockwise)
Preceding gene: 170754801
Following gene: 170756299
Centisome position: 14.79
GC content: 30.42
Gene sequence:
>240_bases ATGGGAATTATAGTTAATCTCGATGTTATAATGGCAAAACGAAAGATGTCTCTTAAAGAATTAGCTGAAAAAATTAATTT AACTAATGCTAACTTATCAATTCTAAAAAATAACAAAGCAAAGGCTATAAGATTTTCTACCTTAGAGGCTATATGCAGGG AGTTGAATTGTCAACCCGGAGATATTTTAGAATACAAAGAAGATCCAAGCAAGGCTGACAAAGAGGATGAATTAATTTAA
Upstream 100 bases:
>100_bases TAGGTATTATGGCTTTAGTTTTGGCTGAGATTTTTAAAAAAGCTGTCAAAATAAAAGATGAAAATGATTTAACAATATAA CACAGGATAGGAGATTTTGT
Downstream 100 bases:
>100_bases ATAAAGTAAAAGTGTGGAGTAGTTTTTATATTTTTACTCCACACTTTTATTTTGGTTAATCATACATAAAATTTATCTAA TCAAATTATTTGTTTCTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MGIIVNLDVIMAKRKMSLKELAEKINLTNANLSILKNNKAKAIRFSTLEAICRELNCQPGDILEYKEDPSKADKEDELI
Sequences:
>Translated_79_residues MGIIVNLDVIMAKRKMSLKELAEKINLTNANLSILKNNKAKAIRFSTLEAICRELNCQPGDILEYKEDPSKADKEDELI >Mature_78_residues GIIVNLDVIMAKRKMSLKELAEKINLTNANLSILKNNKAKAIRFSTLEAICRELNCQPGDILEYKEDPSKADKEDELI
Specific function: Unknown
COG id: COG3655
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001387 - InterPro: IPR010982 [H]
Pfam domain/function: PF01381 HTH_3 [H]
EC number: NA
Molecular weight: Translated: 8919; Mature: 8787
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIIVNLDVIMAKRKMSLKELAEKINLTNANLSILKNNKAKAIRFSTLEAICRELNCQPG CCEEEEHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCEEHHHHHHHHHHHCCCCCC DILEYKEDPSKADKEDELI CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GIIVNLDVIMAKRKMSLKELAEKINLTNANLSILKNNKAKAIRFSTLEAICRELNCQPG CEEEEHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCEEHHHHHHHHHHHCCCCCC DILEYKEDPSKADKEDELI CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]