| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754776
Identifier: 170754776
GI number: 170754776
Start: 2793062
End: 2794060
Strand: Reverse
Name: 170754776
Synonym: CLD_1952
Alternate gene names: NA
Gene position: 2794060-2793062 (Counterclockwise)
Preceding gene: 170755604
Following gene: 170757766
Centisome position: 70.59
GC content: 24.82
Gene sequence:
>999_bases ATGCTGAAAGATATGTTGATTAAAGAAATAAGAGAATATGTTTATCATAAAAATTTGTTTAAAATAATAAATTTAAGTAA AAGTTTTAATGTTAGATTTTTAGCACAGGGTGAATATAATATAAATTTTATATTAGAGGATGAAATAAATAAGTATGTTT TTAGGGTAAATACGGGAAGTCAATTGTCATTAGAAAATCAAATAGAATATGAATATAGCGTATTAAAAAGGTTAGAAAAT AGTAAGGTTACTCCAAAGGTTTATTATGTAGATGGTAGTAGAGAATATATAAAATATGGTGTGTTAATAATGGAATTTTT GGATGGTAGACCATTAAATTATGAAAAAGACTTAAATAAAGCGGCTAAAATATTTGGCAAAATACATTCCATAGAACTTA ATAAAGAGGATTTTTCTTCTTTTATAATAGAAAATAATATATTTTCTGACAGAATAAAAGAAGCTAATAATCTTTTAAAG GATTTTTGGGATAGTTCATTAATAAAAGAAGATATTAAAAAATTCTTTTATAAATTTATAAATTGGGCTACAGAAAATTC TTATAAGGAAAAATATTTTATAGATGATCCCATACAAGTAATAAATAACACAGAGGTTAATTCTCATAATTTCATAATAG GGTCTAAGAATTTTTATTTAATAGATTGGGAGAAACCAGTGATAAGCGACCCCTGTCAGGATTTAACACAGTTTTTAGCA CCAACAACTACTCTTTGGAAAGCTAATTATATACTAAAAGACTGCGAGATAAATGAGTTTTTTTGTAATTATGAGAAATT TTTTAAAGGGAAAAATATAAGAGAAAGAGTAGATATGTATACACCTTATCTTTATTTGAGAGCTTTAAGCTGGTGTGCTC ATGCTTATTTAGAATATCAAAATCCAGATAGAGATATAAAAAATATGGATACCTATGAAAAGATAAAAGAGTATTTAGAA TTGGATTTTATGAGCAATCTATTAAGTAGGTGGTTTTAA
Upstream 100 bases:
>100_bases CTTAAAAACTTGATTTATAGATTAAATTGTAAATTATATAAGTATGATATTATACCTAAAAATACTAAGAAGTATTTAGA AAATTGGTGGAGAGATGAAG
Downstream 100 bases:
>100_bases TGGATAAAAAAAGTTTTTATATAAAAGATGAAAAAAGAAAAAAACATATAAAAGACATAAAAGAAAAATGCATAGAGTGT GATCTATGTGTTAAAAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MLKDMLIKEIREYVYHKNLFKIINLSKSFNVRFLAQGEYNINFILEDEINKYVFRVNTGSQLSLENQIEYEYSVLKRLEN SKVTPKVYYVDGSREYIKYGVLIMEFLDGRPLNYEKDLNKAAKIFGKIHSIELNKEDFSSFIIENNIFSDRIKEANNLLK DFWDSSLIKEDIKKFFYKFINWATENSYKEKYFIDDPIQVINNTEVNSHNFIIGSKNFYLIDWEKPVISDPCQDLTQFLA PTTTLWKANYILKDCEINEFFCNYEKFFKGKNIRERVDMYTPYLYLRALSWCAHAYLEYQNPDRDIKNMDTYEKIKEYLE LDFMSNLLSRWF
Sequences:
>Translated_332_residues MLKDMLIKEIREYVYHKNLFKIINLSKSFNVRFLAQGEYNINFILEDEINKYVFRVNTGSQLSLENQIEYEYSVLKRLEN SKVTPKVYYVDGSREYIKYGVLIMEFLDGRPLNYEKDLNKAAKIFGKIHSIELNKEDFSSFIIENNIFSDRIKEANNLLK DFWDSSLIKEDIKKFFYKFINWATENSYKEKYFIDDPIQVINNTEVNSHNFIIGSKNFYLIDWEKPVISDPCQDLTQFLA PTTTLWKANYILKDCEINEFFCNYEKFFKGKNIRERVDMYTPYLYLRALSWCAHAYLEYQNPDRDIKNMDTYEKIKEYLE LDFMSNLLSRWF >Mature_332_residues MLKDMLIKEIREYVYHKNLFKIINLSKSFNVRFLAQGEYNINFILEDEINKYVFRVNTGSQLSLENQIEYEYSVLKRLEN SKVTPKVYYVDGSREYIKYGVLIMEFLDGRPLNYEKDLNKAAKIFGKIHSIELNKEDFSSFIIENNIFSDRIKEANNLLK DFWDSSLIKEDIKKFFYKFINWATENSYKEKYFIDDPIQVINNTEVNSHNFIIGSKNFYLIDWEKPVISDPCQDLTQFLA PTTTLWKANYILKDCEINEFFCNYEKFFKGKNIRERVDMYTPYLYLRALSWCAHAYLEYQNPDRDIKNMDTYEKIKEYLE LDFMSNLLSRWF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40032; Mature: 40032
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKDMLIKEIREYVYHKNLFKIINLSKSFNVRFLAQGEYNINFILEDEINKYVFRVNTGS CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCCEEEEEECCCC QLSLENQIEYEYSVLKRLENSKVTPKVYYVDGSREYIKYGVLIMEFLDGRPLNYEKDLNK EECCHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHH AAKIFGKIHSIELNKEDFSSFIIENNIFSDRIKEANNLLKDFWDSSLIKEDIKKFFYKFI HHHHHHHHHEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NWATENSYKEKYFIDDPIQVINNTEVNSHNFIIGSKNFYLIDWEKPVISDPCQDLTQFLA HHHCCCCCCCCEECCCHHHHHCCCCCCCCEEEEECCCEEEEECCCCCCCCCHHHHHHHHC PTTTLWKANYILKDCEINEFFCNYEKFFKGKNIRERVDMYTPYLYLRALSWCAHAYLEYQ CCHHHEECCEEEECCCCHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC NPDRDIKNMDTYEKIKEYLELDFMSNLLSRWF CCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLKDMLIKEIREYVYHKNLFKIINLSKSFNVRFLAQGEYNINFILEDEINKYVFRVNTGS CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCCEEEEEECCCC QLSLENQIEYEYSVLKRLENSKVTPKVYYVDGSREYIKYGVLIMEFLDGRPLNYEKDLNK EECCHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHH AAKIFGKIHSIELNKEDFSSFIIENNIFSDRIKEANNLLKDFWDSSLIKEDIKKFFYKFI HHHHHHHHHEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NWATENSYKEKYFIDDPIQVINNTEVNSHNFIIGSKNFYLIDWEKPVISDPCQDLTQFLA HHHCCCCCCCCEECCCHHHHHCCCCCCCCEEEEECCCEEEEECCCCCCCCCHHHHHHHHC PTTTLWKANYILKDCEINEFFCNYEKFFKGKNIRERVDMYTPYLYLRALSWCAHAYLEYQ CCHHHEECCEEEECCCCHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC NPDRDIKNMDTYEKIKEYLELDFMSNLLSRWF CCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA