| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754667
Identifier: 170754667
GI number: 170754667
Start: 1055140
End: 1055571
Strand: Direct
Name: 170754667
Synonym: CLD_3621
Alternate gene names: NA
Gene position: 1055140-1055571 (Clockwise)
Preceding gene: 170754533
Following gene: 170756121
Centisome position: 26.66
GC content: 25.93
Gene sequence:
>432_bases ATGAATAAGGGGAAAAAGCTTATACTTTTGGCTTTAGTTATATGTTTACTAGGTGGTATTGGAATATATAAATATCTAGA TACAAATTATAAAAATGATCTTACAATAAGTGATGTTAAGTGGGATGGAGAAACAAGATGGTGGACGGAGAACTCTAGTG GTAATGAATATAATGTTAAATTTAAGTACTTTAATGGGAAAGGTGTAAAGAAAATAACTTCTAAGAAATCTAGTTATGAT ATAAAAATTAATAGCAAAATTGAATCAGGAGATTTAAATATAAAGATATATGATGATAAAAAAACATTATTTAATAAAAA TGGTACATTAGATGAAACTATAAGAATCTCTAATACTGATAATAAAGAGGTGAAAATTGAAATCACAGGTAAAGAAGCTA AAGACGGCTATATTAAACTTAAAGCAATGTAG
Upstream 100 bases:
>100_bases TTCAAGTTACTATAAGTAAAGCTAAAGGAAAATCAAATATGCTTATAGCAAATAACCCTATATTTATAATAACAGCTACT AAAAATGGAGGGGATTTATA
Downstream 100 bases:
>100_bases TTTTTAAAACTATTACAACTAAGGAGGATACCAATATGAATTTGGAAGAATTAAGACTAGACTGTTCAATTAAGCAGAAA AAAGGACTACATTTTATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MNKGKKLILLALVICLLGGIGIYKYLDTNYKNDLTISDVKWDGETRWWTENSSGNEYNVKFKYFNGKGVKKITSKKSSYD IKINSKIESGDLNIKIYDDKKTLFNKNGTLDETIRISNTDNKEVKIEITGKEAKDGYIKLKAM
Sequences:
>Translated_143_residues MNKGKKLILLALVICLLGGIGIYKYLDTNYKNDLTISDVKWDGETRWWTENSSGNEYNVKFKYFNGKGVKKITSKKSSYD IKINSKIESGDLNIKIYDDKKTLFNKNGTLDETIRISNTDNKEVKIEITGKEAKDGYIKLKAM >Mature_143_residues MNKGKKLILLALVICLLGGIGIYKYLDTNYKNDLTISDVKWDGETRWWTENSSGNEYNVKFKYFNGKGVKKITSKKSSYD IKINSKIESGDLNIKIYDDKKTLFNKNGTLDETIRISNTDNKEVKIEITGKEAKDGYIKLKAM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16345; Mature: 16345
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKGKKLILLALVICLLGGIGIYKYLDTNYKNDLTISDVKWDGETRWWTENSSGNEYNVK CCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEECCCEEEEEECCCCCEEEEE FKYFNGKGVKKITSKKSSYDIKINSKIESGDLNIKIYDDKKTLFNKNGTLDETIRISNTD EEEECCCCCEEECCCCCEEEEEECCEECCCCEEEEEEECCCEEECCCCCCCEEEEEECCC NKEVKIEITGKEAKDGYIKLKAM CCEEEEEECCCCCCCCEEEEEEC >Mature Secondary Structure MNKGKKLILLALVICLLGGIGIYKYLDTNYKNDLTISDVKWDGETRWWTENSSGNEYNVK CCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEECCCEEEEEECCCCCEEEEE FKYFNGKGVKKITSKKSSYDIKINSKIESGDLNIKIYDDKKTLFNKNGTLDETIRISNTD EEEECCCCCEEECCCCCEEEEEECCEECCCCEEEEEEECCCEEECCCCCCCEEEEEECCC NKEVKIEITGKEAKDGYIKLKAM CCEEEEEECCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA