| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754661
Identifier: 170754661
GI number: 170754661
Start: 2873603
End: 2874100
Strand: Reverse
Name: 170754661
Synonym: CLD_1869
Alternate gene names: NA
Gene position: 2874100-2873603 (Counterclockwise)
Preceding gene: 170757389
Following gene: 170755677
Centisome position: 72.61
GC content: 21.69
Gene sequence:
>498_bases ATGAAAAAATTTTCTGTAAGAAAAAAGATATCTTTAATTATAACTTTAATCTTTGTTGTTACCACACTTGCTGTCAACAT AAAAAATTTTAAAAAAGATATAAAATACATAATATCTACTGAAATAAATAATGAATATAATACTAATCAGAGTAGGGATA AAGAAAAAAATTATAATTTGAAAGATCATATATCAGGTCTTTGGAATACTTTAGGTGAGTCCATAGATTATTTAAAATCA AATATAGATAATAAAGAAAAGGCAATAGAAGTAGAAACTTTAATAGATGACTGTATTGTTGCTTTAATTTCTATAGAAGA TGCTCTAAACAAAAACTATAAAGATACATTTAGTAAGTTATTAGTATATACTAGAGACATGAGGACTGATTTTATTAATT TAAAAGAAGTATTAGAAAAAGATGATCAGTCTAAAGAGAAAATTTTAAGAAATATAGAACAAAATTATATAAAAGCTAAA AAAGAAAAGGATTTTTGA
Upstream 100 bases:
>100_bases TTAAATTATTCTAAGGAACTAATTATACTATGCTAAGAGAAGAATTTAGAAAAAATATTAAAGAATATCTAAATTTTAAA ATATGTTAAAGGGGCATTAT
Downstream 100 bases:
>100_bases TTTTACAAAAATCCTTTTTAGATTTGGATTAAGTTTTAATAAAGTCTGTACGATAATAAAGATGATGTATAGAAGGCAGG GAAGCCTATCGAAAAATAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MKKFSVRKKISLIITLIFVVTTLAVNIKNFKKDIKYIISTEINNEYNTNQSRDKEKNYNLKDHISGLWNTLGESIDYLKS NIDNKEKAIEVETLIDDCIVALISIEDALNKNYKDTFSKLLVYTRDMRTDFINLKEVLEKDDQSKEKILRNIEQNYIKAK KEKDF
Sequences:
>Translated_165_residues MKKFSVRKKISLIITLIFVVTTLAVNIKNFKKDIKYIISTEINNEYNTNQSRDKEKNYNLKDHISGLWNTLGESIDYLKS NIDNKEKAIEVETLIDDCIVALISIEDALNKNYKDTFSKLLVYTRDMRTDFINLKEVLEKDDQSKEKILRNIEQNYIKAK KEKDF >Mature_165_residues MKKFSVRKKISLIITLIFVVTTLAVNIKNFKKDIKYIISTEINNEYNTNQSRDKEKNYNLKDHISGLWNTLGESIDYLKS NIDNKEKAIEVETLIDDCIVALISIEDALNKNYKDTFSKLLVYTRDMRTDFINLKEVLEKDDQSKEKILRNIEQNYIKAK KEKDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19436; Mature: 19436
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFSVRKKISLIITLIFVVTTLAVNIKNFKKDIKYIISTEINNEYNTNQSRDKEKNYNL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCH KDHISGLWNTLGESIDYLKSNIDNKEKAIEVETLIDDCIVALISIEDALNKNYKDTFSKL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LVYTRDMRTDFINLKEVLEKDDQSKEKILRNIEQNYIKAKKEKDF HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKFSVRKKISLIITLIFVVTTLAVNIKNFKKDIKYIISTEINNEYNTNQSRDKEKNYNL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCH KDHISGLWNTLGESIDYLKSNIDNKEKAIEVETLIDDCIVALISIEDALNKNYKDTFSKL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LVYTRDMRTDFINLKEVLEKDDQSKEKILRNIEQNYIKAKKEKDF HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA