| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757389
Identifier: 170757389
GI number: 170757389
Start: 2874319
End: 2875347
Strand: Reverse
Name: 170757389
Synonym: CLD_1868
Alternate gene names: NA
Gene position: 2875347-2874319 (Counterclockwise)
Preceding gene: 170756369
Following gene: 170754661
Centisome position: 72.64
GC content: 25.66
Gene sequence:
>1029_bases ATGAAGATACTTTTAACAGGCATAGGAAAGAGAGTTCAGCTTATAAAATATTTAAAAAAACATGGAGAAATAATAGGGGG AGACGTAGGAGAATTAGTTCCAGTCATATCCTTTATAGATAAATTTTATAAAATACCTAAATGCACAGATATAAATTATG TAGATAGTTTATTAAATATTTGCAAAGAAGAAAAAGTAGATTTATTAATACCTCTATATGAAAAAGAATTTGCTACCTTA TGCAAAAGTAGATCAAAATTTAAGGGTGTAGGTACTATACTTCTTTTAAGTCATAAAAATATAATAAGCACATGTAATGA TAAATTAAATACTTATAAATTTTTCATAGAAAATAATATAAACACCCCAATTTCATATACAAAGGATAATATAGAAAATA TATTAAGAAATAATCCAGAAGAATTAAGATTTCCTCTTATATTAAAGCCTTTAAGGGGAATGGGAAGTGCAGGGGTCTTT AAAGCTAATAATAAAAAACAACTAGAATTTTTTAAGGATTATATAAAAGAACCTATAATACAGGAATTTATAAAAGGTAA AGAATATACTATAGACGTACTTTGTGACTTAAAAGGAGAGATAATATCTGTAGTTCCAAGAGAAAGAATAGAAGTACGTT CTGGAGAAGTGAGCAAAAGTAGAACAGTGATTAATAAGAAAATAATAAAAGCTACTATAGATTTAGTTAATAAATTAAAA CAATACATAGAAGAATATAAAATATATTGTAAGATCACCAGTGAGAATTTTAATGCATTACAATTAGAAAAAGATGAAGG CACAGTTATAGGACCATTAACTATACAATGCATAGTTACAAAAGATAATGAAATAAAATTCATAGAAATAAATCCAAGAT TTGGAGGAGGAGTACCTTTATCCTTTGAAGCTGGGATAGATTATGGAAAGTACTTTAAATGTATGGTAGATAAAAAAGAA ATAATCCCTATAATAGGAGAATTTAAAGAAATAACTATGATTAGATATGATGAAGCTATTTTTATTTGA
Upstream 100 bases:
>100_bases ACAATTAAGAAAAGAAATGATTAAATTTAAGTTGTATGATTATAATGAATTAAAATCTAAGTTTGAAGCAGCAGTTACTA AATGGGAGTAGGATATATAT
Downstream 100 bases:
>100_bases AAAATATATTATTTAGAAAATATATAGAGATAACATAAATAGACTACTTTTATTTGAATTTTTATAATAAATCATATTAG TGGAGCAAGGGAATATTCTT
Product: carbamoyl phosphate synthase-like protein
Products: NA
Alternate protein names: Carbamoyl Phosphate Synthase Large Subunit; ATP-Grasp Domain Protein; Carbamoylphosphate Synthase; CarB Protein; Carbamoylphosphate Synthase Large Subunit; Carbamoylphosphate Synthase Large Subunit Short Form; Conserved Domain Protein; Biotin Carboxylase; ATP Domain Protein; Carbamoyl Phosphate Synthase-Like-Protein
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MKILLTGIGKRVQLIKYLKKHGEIIGGDVGELVPVISFIDKFYKIPKCTDINYVDSLLNICKEEKVDLLIPLYEKEFATL CKSRSKFKGVGTILLLSHKNIISTCNDKLNTYKFFIENNINTPISYTKDNIENILRNNPEELRFPLILKPLRGMGSAGVF KANNKKQLEFFKDYIKEPIIQEFIKGKEYTIDVLCDLKGEIISVVPRERIEVRSGEVSKSRTVINKKIIKATIDLVNKLK QYIEEYKIYCKITSENFNALQLEKDEGTVIGPLTIQCIVTKDNEIKFIEINPRFGGGVPLSFEAGIDYGKYFKCMVDKKE IIPIIGEFKEITMIRYDEAIFI
Sequences:
>Translated_342_residues MKILLTGIGKRVQLIKYLKKHGEIIGGDVGELVPVISFIDKFYKIPKCTDINYVDSLLNICKEEKVDLLIPLYEKEFATL CKSRSKFKGVGTILLLSHKNIISTCNDKLNTYKFFIENNINTPISYTKDNIENILRNNPEELRFPLILKPLRGMGSAGVF KANNKKQLEFFKDYIKEPIIQEFIKGKEYTIDVLCDLKGEIISVVPRERIEVRSGEVSKSRTVINKKIIKATIDLVNKLK QYIEEYKIYCKITSENFNALQLEKDEGTVIGPLTIQCIVTKDNEIKFIEINPRFGGGVPLSFEAGIDYGKYFKCMVDKKE IIPIIGEFKEITMIRYDEAIFI >Mature_342_residues MKILLTGIGKRVQLIKYLKKHGEIIGGDVGELVPVISFIDKFYKIPKCTDINYVDSLLNICKEEKVDLLIPLYEKEFATL CKSRSKFKGVGTILLLSHKNIISTCNDKLNTYKFFIENNINTPISYTKDNIENILRNNPEELRFPLILKPLRGMGSAGVF KANNKKQLEFFKDYIKEPIIQEFIKGKEYTIDVLCDLKGEIISVVPRERIEVRSGEVSKSRTVINKKIIKATIDLVNKLK QYIEEYKIYCKITSENFNALQLEKDEGTVIGPLTIQCIVTKDNEIKFIEINPRFGGGVPLSFEAGIDYGKYFKCMVDKKE IIPIIGEFKEITMIRYDEAIFI
Specific function: Unknown
COG id: COG0458
COG function: function code EF; Carbamoylphosphate synthase large subunit (split gene in MJ)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39247; Mature: 39247
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILLTGIGKRVQLIKYLKKHGEIIGGDVGELVPVISFIDKFYKIPKCTDINYVDSLLNI CEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH CKEEKVDLLIPLYEKEFATLCKSRSKFKGVGTILLLSHKNIISTCNDKLNTYKFFIENNI HHHCCCEEEEECHHHHHHHHHHCHHHCCCCEEEEEEECCHHHHHHCCCCCEEEEEEECCC NTPISYTKDNIENILRNNPEELRFPLILKPLRGMGSAGVFKANNKKQLEFFKDYIKEPII CCCCCCCHHHHHHHHHCCHHHCCCCCEEHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHH QEFIKGKEYTIDVLCDLKGEIISVVPRERIEVRSGEVSKSRTVINKKIIKATIDLVNKLK HHHHCCCCEEEEEEECCCCCEEECCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHH QYIEEYKIYCKITSENFNALQLEKDEGTVIGPLTIQCIVTKDNEIKFIEINPRFGGGVPL HHHHHEEEEEEEECCCCCEEEEECCCCCEECCEEEEEEEECCCCEEEEEECCCCCCCCCE SFEAGIDYGKYFKCMVDKKEIIPIIGEFKEITMIRYDEAIFI EECCCCCCCHHHEEEECCHHHHHHHCCHHHEEEEEECCEEEC >Mature Secondary Structure MKILLTGIGKRVQLIKYLKKHGEIIGGDVGELVPVISFIDKFYKIPKCTDINYVDSLLNI CEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH CKEEKVDLLIPLYEKEFATLCKSRSKFKGVGTILLLSHKNIISTCNDKLNTYKFFIENNI HHHCCCEEEEECHHHHHHHHHHCHHHCCCCEEEEEEECCHHHHHHCCCCCEEEEEEECCC NTPISYTKDNIENILRNNPEELRFPLILKPLRGMGSAGVFKANNKKQLEFFKDYIKEPII CCCCCCCHHHHHHHHHCCHHHCCCCCEEHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHH QEFIKGKEYTIDVLCDLKGEIISVVPRERIEVRSGEVSKSRTVINKKIIKATIDLVNKLK HHHHCCCCEEEEEEECCCCCEEECCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHH QYIEEYKIYCKITSENFNALQLEKDEGTVIGPLTIQCIVTKDNEIKFIEINPRFGGGVPL HHHHHEEEEEEEECCCCCEEEEECCCCCEECCEEEEEEEECCCCEEEEEECCCCCCCCCE SFEAGIDYGKYFKCMVDKKEIIPIIGEFKEITMIRYDEAIFI EECCCCCCCHHHEEEECCHHHHHHHCCHHHEEEEEECCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA