Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is fliK

Identifier: 170754640

GI number: 170754640

Start: 2838578

End: 2839966

Strand: Reverse

Name: fliK

Synonym: CLD_1906

Alternate gene names: NA

Gene position: 2839966-2838578 (Counterclockwise)

Preceding gene: 170755283

Following gene: 170754574

Centisome position: 71.75

GC content: 25.27

Gene sequence:

>1389_bases
GTGGAATTGAAAATAAGTGGATTTACTAAAATAGAAAATAATTCATCTACTAAGAAGCCTACTAGTCAAAGTGAAAAATC
TTATTCTTTTAATGAAATATTAAACAATATATCTTCTAATAAAAGCTCTAGTAAAGATAAAAATGTTAGCACAAAACAGG
ATACTGAACAAGATAATAAAAAATGTTTAATTAAAGATGAAAACATAAATAGTAAAGACAGTAGCATTATATCAAAATTA
AACAAAGAGGATATGCAAAAAATAAAGGATAAATTAAAAGAACAAGGTTTTTCTAAAGAAGAGTTAGATTCTATAAAGTC
TTTAGATGATTTAAAAAAATTATTACAAAAGATTAAGGACGATGGAGATTTAGATAGCTTTGCATCTTTAGTTAACTCTA
TATTACAGTGTTTATATTCTGGACAAAATGTAAAATTAGGTAAAGAATTAGAACAAAATTTAGATAAATTAAAAGTTTTA
CTAAATAATTTATCTGAAGGTAACGGTAACAAGGAACAATTACTAATGGAGATAAAAGATATCTTGGGTGAAGAGTTTAA
TAAGTTAAATCTTACAGATAAAAATTCATTAGATGAAGATTTGTTAGAAACTTTTTCAAATAAGCTTCAGATGAAAATTG
AAAAGGAGCCTAATGAAGAAAAATTAAGTCTTTTAAAAAATATTAAAAGTGAGATGGAAAATATTTTAAAGGAAGAAGCT
AATAATAAATTACCTGTAGAGCCTAAAATAGATATTAGTGAGCCATTAGTATTAGAGGAAGAAACCGATTCTTCTAATTT
AAAAGAAAATACTTCTAAAGAGGACAAGCTCTTAAAGGGACTTTTAGAGGATAAAGAACAAGGAACAGGAGAAAAAATAA
ATAAAACTGTTAATTTTATGTCTCATCTTAAAAATTCTACGGACATAAACGAATTATCTTCAAATGAAACTTTAGGTAAA
TTAGTAATCAATAAAAATACTATGAATACTGACATAATCAAATCTATAAAATATATGGAATTAAATAATGTAAAAGATTT
AACAGTAAAAATAATGCCAAAAGAATTAGGAGAAGTATTTATAAAACTAACTATGGAAGGTGGCATTATGAAAGCTAATA
TAGGAGCTACTACAAAGGAAGCCTATAATTTATTAAATTCCAATATGCAATTAATAGAAGACAAGCTTCAGAATTCTGGT
ATAAAAGTTCAAGAGCTTTCACTGAATATATACAACGAAGATACAACTTTCTTTAAACAGAGTAGTGAAAATGGGAAAAA
TAGTAACCCATCAAAATCAGAAAATAAAGCAGATTTATCATCTATGGATGAAATACCAGAAGAAGAAAATATAAGCACTA
TAGATGGGAATGTAAATATCTTAGCTTAA

Upstream 100 bases:

>100_bases
AATTAGCCTTTGAAAAGGAACAAAATATGATAGAGCAAAGAAATAATGATGAATTTGCTCTCTATGCATTTATAAGAAAT
GCTGAAAGGAGGTGAGAAAT

Downstream 100 bases:

>100_bases
TATTAAAAAATGGAATGGAGGTGTAATATATGCCAACAGCAATTAATTCAAATTATTCACCTTATACTGGTAAAACTAAT
AAAACTAGTGATGAGAATAA

Product: flagellar hook-length control protein

Products: NA

Alternate protein names: Flagellar Hook-Length Control Protein FliK

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MELKISGFTKIENNSSTKKPTSQSEKSYSFNEILNNISSNKSSSKDKNVSTKQDTEQDNKKCLIKDENINSKDSSIISKL
NKEDMQKIKDKLKEQGFSKEELDSIKSLDDLKKLLQKIKDDGDLDSFASLVNSILQCLYSGQNVKLGKELEQNLDKLKVL
LNNLSEGNGNKEQLLMEIKDILGEEFNKLNLTDKNSLDEDLLETFSNKLQMKIEKEPNEEKLSLLKNIKSEMENILKEEA
NNKLPVEPKIDISEPLVLEEETDSSNLKENTSKEDKLLKGLLEDKEQGTGEKINKTVNFMSHLKNSTDINELSSNETLGK
LVINKNTMNTDIIKSIKYMELNNVKDLTVKIMPKELGEVFIKLTMEGGIMKANIGATTKEAYNLLNSNMQLIEDKLQNSG
IKVQELSLNIYNEDTTFFKQSSENGKNSNPSKSENKADLSSMDEIPEEENISTIDGNVNILA

Sequences:

>Translated_462_residues
MELKISGFTKIENNSSTKKPTSQSEKSYSFNEILNNISSNKSSSKDKNVSTKQDTEQDNKKCLIKDENINSKDSSIISKL
NKEDMQKIKDKLKEQGFSKEELDSIKSLDDLKKLLQKIKDDGDLDSFASLVNSILQCLYSGQNVKLGKELEQNLDKLKVL
LNNLSEGNGNKEQLLMEIKDILGEEFNKLNLTDKNSLDEDLLETFSNKLQMKIEKEPNEEKLSLLKNIKSEMENILKEEA
NNKLPVEPKIDISEPLVLEEETDSSNLKENTSKEDKLLKGLLEDKEQGTGEKINKTVNFMSHLKNSTDINELSSNETLGK
LVINKNTMNTDIIKSIKYMELNNVKDLTVKIMPKELGEVFIKLTMEGGIMKANIGATTKEAYNLLNSNMQLIEDKLQNSG
IKVQELSLNIYNEDTTFFKQSSENGKNSNPSKSENKADLSSMDEIPEEENISTIDGNVNILA
>Mature_462_residues
MELKISGFTKIENNSSTKKPTSQSEKSYSFNEILNNISSNKSSSKDKNVSTKQDTEQDNKKCLIKDENINSKDSSIISKL
NKEDMQKIKDKLKEQGFSKEELDSIKSLDDLKKLLQKIKDDGDLDSFASLVNSILQCLYSGQNVKLGKELEQNLDKLKVL
LNNLSEGNGNKEQLLMEIKDILGEEFNKLNLTDKNSLDEDLLETFSNKLQMKIEKEPNEEKLSLLKNIKSEMENILKEEA
NNKLPVEPKIDISEPLVLEEETDSSNLKENTSKEDKLLKGLLEDKEQGTGEKINKTVNFMSHLKNSTDINELSSNETLGK
LVINKNTMNTDIIKSIKYMELNNVKDLTVKIMPKELGEVFIKLTMEGGIMKANIGATTKEAYNLLNSNMQLIEDKLQNSG
IKVQELSLNIYNEDTTFFKQSSENGKNSNPSKSENKADLSSMDEIPEEENISTIDGNVNILA

Specific function: Unknown

COG id: COG3144

COG function: function code N; Flagellar hook-length control protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52098; Mature: 52098

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKISGFTKIENNSSTKKPTSQSEKSYSFNEILNNISSNKSSSKDKNVSTKQDTEQDNK
CEEEECCCEEECCCCCCCCCCCCCHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
KCLIKDENINSKDSSIISKLNKEDMQKIKDKLKEQGFSKEELDSIKSLDDLKKLLQKIKD
EEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
DGDLDSFASLVNSILQCLYSGQNVKLGKELEQNLDKLKVLLNNLSEGNGNKEQLLMEIKD
CCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ILGEEFNKLNLTDKNSLDEDLLETFSNKLQMKIEKEPNEEKLSLLKNIKSEMENILKEEA
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC
NNKLPVEPKIDISEPLVLEEETDSSNLKENTSKEDKLLKGLLEDKEQGTGEKINKTVNFM
CCCCCCCCCCCCCCCEEEECCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SHLKNSTDINELSSNETLGKLVINKNTMNTDIIKSIKYMELNNVKDLTVKIMPKELGEVF
HHHCCCCCHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECHHHHHHHE
IKLTMEGGIMKANIGATTKEAYNLLNSNMQLIEDKLQNSGIKVQELSLNIYNEDTTFFKQ
EEEEECCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHC
SSENGKNSNPSKSENKADLSSMDEIPEEENISTIDGNVNILA
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCEEEEC
>Mature Secondary Structure
MELKISGFTKIENNSSTKKPTSQSEKSYSFNEILNNISSNKSSSKDKNVSTKQDTEQDNK
CEEEECCCEEECCCCCCCCCCCCCHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
KCLIKDENINSKDSSIISKLNKEDMQKIKDKLKEQGFSKEELDSIKSLDDLKKLLQKIKD
EEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
DGDLDSFASLVNSILQCLYSGQNVKLGKELEQNLDKLKVLLNNLSEGNGNKEQLLMEIKD
CCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ILGEEFNKLNLTDKNSLDEDLLETFSNKLQMKIEKEPNEEKLSLLKNIKSEMENILKEEA
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC
NNKLPVEPKIDISEPLVLEEETDSSNLKENTSKEDKLLKGLLEDKEQGTGEKINKTVNFM
CCCCCCCCCCCCCCCEEEECCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SHLKNSTDINELSSNETLGKLVINKNTMNTDIIKSIKYMELNNVKDLTVKIMPKELGEVF
HHHCCCCCHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECHHHHHHHE
IKLTMEGGIMKANIGATTKEAYNLLNSNMQLIEDKLQNSGIKVQELSLNIYNEDTTFFKQ
EEEEECCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHC
SSENGKNSNPSKSENKADLSSMDEIPEEENISTIDGNVNILA
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA