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The map label for this gene is flgD

Identifier: 170754574

GI number: 170754574

Start: 2837727

End: 2838548

Strand: Reverse

Name: flgD

Synonym: CLD_1907

Alternate gene names: 170754574

Gene position: 2838548-2837727 (Counterclockwise)

Preceding gene: 170754640

Following gene: 170757550

Centisome position: 71.71

GC content: 31.87

Gene sequence:

>822_bases
ATGCCAACAGCAATTAATTCAAATTATTCACCTTATACTGGTAAAACTAATAAAACTAGTGATGAGAATAAAAAAGAAGC
GGATAAGAAAGAAGATGAAAAAGGAATAATAGAGAGAACGCAGGAAAACACTGGCATTAAAACTGATAGAGGTACTAGAA
TTGTTAAAAAGGGACAGGACCTTGATAAAAATGCTTTTTTTAAGATATTGGCTGCGGAACTTGCTAATCAAGATCCTACT
AATGCAAAGGATGGGACAGAATATGTATCTCAGTTAGCGCAATTTTCATCTTTAGAGCAAATGGCTAATTTAAATAGCAT
GATGAAGTTAACAGGAGCTTCTAATTTTATAGGTAAAGTGGTTTTACTTAGAAGGTTTGATGAGCAGGGGAATCAATATG
CAGGAATAGTAAGAAATGTAATCAAAAATGGTGATGAAATTAAATTAAGTATAGAGTATGCTCCAGGTAAAGTAGGAGAA
TTTGCCATGGAGGATGTTCTAAATATTACAGATGATATAAACGAAAATTCTAAGTATAATAATGATTTATTAAATGCAGT
AAGTTTAATAGGAAAAAATGTACTAATGGATGATGGAAAAGAAAAACTATCTGGAGTGGTAAAAGGTGTAGTTAGAAATG
GCCTAGGAGTAAGTATTAGAGTTACTATAACAAAAGATGGCAAAGATCAAGATATATATGTACCATTTGAATATGTAACA
AATGTTCAAGAAGATGGTGACTTTGGTGATATTGAAAATCCAGGTAAAAAGCCTTCTGAGGGAGGAGAAGAAGATAAAAC
CGGAGTAGAAGAGAAAAAATAA

Upstream 100 bases:

>100_bases
CATCTATGGATGAAATACCAGAAGAAGAAAATATAAGCACTATAGATGGGAATGTAAATATCTTAGCTTAATATTAAAAA
ATGGAATGGAGGTGTAATAT

Downstream 100 bases:

>100_bases
GGATGTGGAAAAATATGTCATTTAAAATTATAAATGGTAAATTACATTTAGTAGAAGATTATAATTATGCATCCTTAAAA
AATAAAAATATTAAAAGTGA

Product: flagellar hook capping protein

Products: NA

Alternate protein names: Flagellar Hook Assembly Protein FlgD; Basal-Body Rod Protein FlgD; Basal-Body Rod Protein; Flagellar Hook Protein FlgD; Flagellar Hook Assembly Protein

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MPTAINSNYSPYTGKTNKTSDENKKEADKKEDEKGIIERTQENTGIKTDRGTRIVKKGQDLDKNAFFKILAAELANQDPT
NAKDGTEYVSQLAQFSSLEQMANLNSMMKLTGASNFIGKVVLLRRFDEQGNQYAGIVRNVIKNGDEIKLSIEYAPGKVGE
FAMEDVLNITDDINENSKYNNDLLNAVSLIGKNVLMDDGKEKLSGVVKGVVRNGLGVSIRVTITKDGKDQDIYVPFEYVT
NVQEDGDFGDIENPGKKPSEGGEEDKTGVEEKK

Sequences:

>Translated_273_residues
MPTAINSNYSPYTGKTNKTSDENKKEADKKEDEKGIIERTQENTGIKTDRGTRIVKKGQDLDKNAFFKILAAELANQDPT
NAKDGTEYVSQLAQFSSLEQMANLNSMMKLTGASNFIGKVVLLRRFDEQGNQYAGIVRNVIKNGDEIKLSIEYAPGKVGE
FAMEDVLNITDDINENSKYNNDLLNAVSLIGKNVLMDDGKEKLSGVVKGVVRNGLGVSIRVTITKDGKDQDIYVPFEYVT
NVQEDGDFGDIENPGKKPSEGGEEDKTGVEEKK
>Mature_272_residues
PTAINSNYSPYTGKTNKTSDENKKEADKKEDEKGIIERTQENTGIKTDRGTRIVKKGQDLDKNAFFKILAAELANQDPTN
AKDGTEYVSQLAQFSSLEQMANLNSMMKLTGASNFIGKVVLLRRFDEQGNQYAGIVRNVIKNGDEIKLSIEYAPGKVGEF
AMEDVLNITDDINENSKYNNDLLNAVSLIGKNVLMDDGKEKLSGVVKGVVRNGLGVSIRVTITKDGKDQDIYVPFEYVTN
VQEDGDFGDIENPGKKPSEGGEEDKTGVEEKK

Specific function: Required For Flagellar Hook Formation. May Act As A Scaffolding Protein. [C]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30087; Mature: 29956

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTAINSNYSPYTGKTNKTSDENKKEADKKEDEKGIIERTQENTGIKTDRGTRIVKKGQD
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCC
LDKNAFFKILAAELANQDPTNAKDGTEYVSQLAQFSSLEQMANLNSMMKLTGASNFIGKV
CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
VLLRRFDEQGNQYAGIVRNVIKNGDEIKLSIEYAPGKVGEFAMEDVLNITDDINENSKYN
HHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHH
NDLLNAVSLIGKNVLMDDGKEKLSGVVKGVVRNGLGVSIRVTITKDGKDQDIYVPFEYVT
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECHHHHC
NVQEDGDFGDIENPGKKPSEGGEEDKTGVEEKK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PTAINSNYSPYTGKTNKTSDENKKEADKKEDEKGIIERTQENTGIKTDRGTRIVKKGQD
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCC
LDKNAFFKILAAELANQDPTNAKDGTEYVSQLAQFSSLEQMANLNSMMKLTGASNFIGKV
CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
VLLRRFDEQGNQYAGIVRNVIKNGDEIKLSIEYAPGKVGEFAMEDVLNITDDINENSKYN
HHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHH
NDLLNAVSLIGKNVLMDDGKEKLSGVVKGVVRNGLGVSIRVTITKDGKDQDIYVPFEYVT
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECHHHHC
NVQEDGDFGDIENPGKKPSEGGEEDKTGVEEKK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA