| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754607
Identifier: 170754607
GI number: 170754607
Start: 2821194
End: 2821775
Strand: Reverse
Name: 170754607
Synonym: CLD_1927
Alternate gene names: NA
Gene position: 2821775-2821194 (Counterclockwise)
Preceding gene: 170755157
Following gene: 170756347
Centisome position: 71.29
GC content: 29.21
Gene sequence:
>582_bases ATGAATAGTAATATATATTACAGAAAAAAGCACTCATATAAGAATAGACCCTATTATTGTCCTATAAACAACATGTGGTT TTACCCATATATGTATATGAATCCATATACATCTTATATGCTTAACCCTTTTATGACTCCATATACGGATCCTTATATGA TGAATGCATATTACGGGAATATGTGCTCTTATAAGGATAAAGCTCAATGTAGGGCCACTAGAGCTTATGGTGCAGATAAT TATGGGTTCACAAAGGAAAATATATATCCAAAGCAATATCAAAAAGAAGTTTATATGAAAGAAGAAAATAAGAAAAGATT TTACGAGGAAGATTCTTTAGATGATATGGTAATATTTAATGAAGATGGCGAAAATGAACATATTAAAAAAGAAAAAAAAT TAGATAGGGCACAAGAGAAAATTTATGATTCAGATTTAGAGCCTGCTTTTACAGAAAAAAAGGAGATTCAGCTAGAGAAA ATTAATAAAGAGGCAGAAGTAGATGAATCAAAAGAAAAAGAACCATATAGAGGGATAAAAATAAATATGAGAAAGGTTCC GTTAAAGGAAATAACAGATTAG
Upstream 100 bases:
>100_bases AAATTTTTTCTGTAAACAAATAAAAAATTAATCATATAATGTGTTGTAAGGAATTATATTTAAAGTATAAGGTTAATAAT AATTTATAGGGGGATTTATA
Downstream 100 bases:
>100_bases AGTAGTCTTTCTACAGATCGTAATATCTTAATCTGTAAAAAAATTAAAATAAAGGTATTTTAATTTAAATAAATAGCTAC AAAAATAAAGCATTTTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MNSNIYYRKKHSYKNRPYYCPINNMWFYPYMYMNPYTSYMLNPFMTPYTDPYMMNAYYGNMCSYKDKAQCRATRAYGADN YGFTKENIYPKQYQKEVYMKEENKKRFYEEDSLDDMVIFNEDGENEHIKKEKKLDRAQEKIYDSDLEPAFTEKKEIQLEK INKEAEVDESKEKEPYRGIKINMRKVPLKEITD
Sequences:
>Translated_193_residues MNSNIYYRKKHSYKNRPYYCPINNMWFYPYMYMNPYTSYMLNPFMTPYTDPYMMNAYYGNMCSYKDKAQCRATRAYGADN YGFTKENIYPKQYQKEVYMKEENKKRFYEEDSLDDMVIFNEDGENEHIKKEKKLDRAQEKIYDSDLEPAFTEKKEIQLEK INKEAEVDESKEKEPYRGIKINMRKVPLKEITD >Mature_193_residues MNSNIYYRKKHSYKNRPYYCPINNMWFYPYMYMNPYTSYMLNPFMTPYTDPYMMNAYYGNMCSYKDKAQCRATRAYGADN YGFTKENIYPKQYQKEVYMKEENKKRFYEEDSLDDMVIFNEDGENEHIKKEKKLDRAQEKIYDSDLEPAFTEKKEIQLEK INKEAEVDESKEKEPYRGIKINMRKVPLKEITD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23571; Mature: 23571
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSNIYYRKKHSYKNRPYYCPINNMWFYPYMYMNPYTSYMLNPFMTPYTDPYMMNAYYGN CCCCEEEEECCCCCCCCEECCCCCCEEEEEEEECCHHHHHHCCCCCCCCCCEEEHHHHCC MCSYKDKAQCRATRAYGADNYGFTKENIYPKQYQKEVYMKEENKKRFYEEDSLDDMVIFN CCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEC EDGENEHIKKEKKLDRAQEKIYDSDLEPAFTEKKEIQLEKINKEAEVDESKEKEPYRGIK CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHCCCCCCCCCCCCCEE INMRKVPLKEITD EEEEECCHHHCCC >Mature Secondary Structure MNSNIYYRKKHSYKNRPYYCPINNMWFYPYMYMNPYTSYMLNPFMTPYTDPYMMNAYYGN CCCCEEEEECCCCCCCCEECCCCCCEEEEEEEECCHHHHHHCCCCCCCCCCEEEHHHHCC MCSYKDKAQCRATRAYGADNYGFTKENIYPKQYQKEVYMKEENKKRFYEEDSLDDMVIFN CCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEC EDGENEHIKKEKKLDRAQEKIYDSDLEPAFTEKKEIQLEKINKEAEVDESKEKEPYRGIK CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHCCCCCCCCCCCCCEE INMRKVPLKEITD EEEEECCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA