| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is flgG
Identifier: 170755157
GI number: 170755157
Start: 2822161
End: 2822952
Strand: Reverse
Name: flgG
Synonym: CLD_1926
Alternate gene names: 170755157
Gene position: 2822952-2822161 (Counterclockwise)
Preceding gene: 170755952
Following gene: 170754607
Centisome position: 71.32
GC content: 30.18
Gene sequence:
>792_bases TTGTTAAGAGCTTTATGGAATAGTAAATCAGGCTTAATAGCCCAACAAAATAAATTAGATTCTATATCTAATAATTTAGC TAATGTAAATACTGTAGGATATAAAAGAGAAGATGTATCCTTTCAAGAATTAGTTCAAGAAACTTTAAAGAGAAAGGGAT ATCCAACTTCAGATAGACCAGAAATTCAAACAGGAACAGGAGTTAAGGCTACTAATTGGATAAGAGATACGCATCAACAA GGAATACTTTTAAATACTGGAAATAAAACGGATTTAGCTATAGATGGACAAGGTTTCTTCAGAGTAATAATGCCAGATGG AAATTATGCCTATGAAAGATCAGGTAATTTTGTCGTAGATAGAAATGGAATGTTAGTAGATGAAAATGGTAATAGGTTAG AAATACAGTTGCAACAACCAGAAGGTAGTCAAATTTTAAATAGAATAGGTGAATTTAGCAAAAATAATATAAATATAGCT GAAGATGGATCTATTTCTGTAAAGGACATAGACGGGATAAATAAAATGGTAGGTAAAATTAATATATATAATGCGGTAGG TTCTGATGCTTTTGTATCCATAGGAAGAAATTTGTATATTCCTCAAGAAGGAGTTAATGTCTTTGCTAATAATGATGTAA GTATACTTCAAGGATTTTTAGAAAATTCTAATGTAGATGCAGGTAAGGAAATGACAGAAATGATAATAACTCAAAGAGCC TTTGAATTAAGTTCAAGAGGTATTAAAACAGCAGATGAGATGTGGGGTATAGTAAATAATCTGAGAAAATAA
Upstream 100 bases:
>100_bases ATGAAACTTTAGGGAAAACAGTTAATGAGGTTGGAGCAGCAAGATAAAATAAATTGAGATGATTAAATTATTTATATAAA ATGTTTAAAGGGTGATGATT
Downstream 100 bases:
>100_bases AGTAAAATTTAATTTACTTTGAGTTTTTACCATATCTTAATTTTAGTTGAGCTAATTTGGGGACTTTAAAATTGTGAAGT CTAGGATAAAAATTTAATAT
Product: flagellar basal body rod protein FlgG
Products: NA
Alternate protein names: Distal rod protein [H]
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRPEIQTGTGVKATNWIRDTHQQ GILLNTGNKTDLAIDGQGFFRVIMPDGNYAYERSGNFVVDRNGMLVDENGNRLEIQLQQPEGSQILNRIGEFSKNNINIA EDGSISVKDIDGINKMVGKINIYNAVGSDAFVSIGRNLYIPQEGVNVFANNDVSILQGFLENSNVDAGKEMTEMIITQRA FELSSRGIKTADEMWGIVNNLRK
Sequences:
>Translated_263_residues MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRPEIQTGTGVKATNWIRDTHQQ GILLNTGNKTDLAIDGQGFFRVIMPDGNYAYERSGNFVVDRNGMLVDENGNRLEIQLQQPEGSQILNRIGEFSKNNINIA EDGSISVKDIDGINKMVGKINIYNAVGSDAFVSIGRNLYIPQEGVNVFANNDVSILQGFLENSNVDAGKEMTEMIITQRA FELSSRGIKTADEMWGIVNNLRK >Mature_263_residues MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRPEIQTGTGVKATNWIRDTHQQ GILLNTGNKTDLAIDGQGFFRVIMPDGNYAYERSGNFVVDRNGMLVDENGNRLEIQLQQPEGSQILNRIGEFSKNNINIA EDGSISVKDIDGINKMVGKINIYNAVGSDAFVSIGRNLYIPQEGVNVFANNDVSILQGFLENSNVDAGKEMTEMIITQRA FELSSRGIKTADEMWGIVNNLRK
Specific function: Unknown
COG id: COG4786
COG function: function code N; Flagellar basal body rod protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787318, Length=266, Percent_Identity=36.8421052631579, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI1787317, Length=273, Percent_Identity=25.6410256410256, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1787316, Length=130, Percent_Identity=33.8461538461538, Blast_Score=61, Evalue=7e-11,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 - InterPro: IPR012834 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 29235; Mature: 29235
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRP CCCCCCCCCCCCEECHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCCCCC EIQTGTGVKATNWIRDTHQQGILLNTGNKTDLAIDGQGFFRVIMPDGNYAYERSGNFVVD CCCCCCCCCHHHHHHHHHHCCEEEECCCCCEEEECCCCEEEEEEECCCEEEECCCCEEEE RNGMLVDENGNRLEIQLQQPEGSQILNRIGEFSKNNINIAEDGSISVKDIDGINKMVGKI CCCEEECCCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEECCCCEEEEECCCHHHHHCEE NIYNAVGSDAFVSIGRNLYIPQEGVNVFANNDVSILQGFLENSNVDAGKEMTEMIITQRA EEEECCCCCHHEECCCEEECCCCCCEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH FELSSRGIKTADEMWGIVNNLRK HHHHCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRP CCCCCCCCCCCCEECHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCCCCC EIQTGTGVKATNWIRDTHQQGILLNTGNKTDLAIDGQGFFRVIMPDGNYAYERSGNFVVD CCCCCCCCCHHHHHHHHHHCCEEEECCCCCEEEECCCCEEEEEEECCCEEEECCCCEEEE RNGMLVDENGNRLEIQLQQPEGSQILNRIGEFSKNNINIAEDGSISVKDIDGINKMVGKI CCCEEECCCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEECCCCEEEEECCCHHHHHCEE NIYNAVGSDAFVSIGRNLYIPQEGVNVFANNDVSILQGFLENSNVDAGKEMTEMIITQRA EEEECCCCCHHEECCCEEECCCCCCEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH FELSSRGIKTADEMWGIVNNLRK HHHHCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]