| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754605
Identifier: 170754605
GI number: 170754605
Start: 790905
End: 792248
Strand: Direct
Name: 170754605
Synonym: CLD_0093
Alternate gene names: NA
Gene position: 790905-792248 (Clockwise)
Preceding gene: 170754449
Following gene: 170757053
Centisome position: 19.98
GC content: 24.11
Gene sequence:
>1344_bases ATGGAGAACACTATTCAAAAATATGACTATTCTGTAGAGAATAAATTTAGTGAGGAAAGTTTTTTAAAAGATGTTTTAGT AACTTGCTATGAGAAGAAACTATTAGATGATAATATTTTAGCTAGAATATATTATGAAAGAATGGAACTTTTAAGAGTAA AATTAAAATATTATACAAAAGATGAGAGTAGTTCAGTTATGGTAGAGGTGGCTGAAAGTATTCTACAATGTATTGATTAT ACCATAGGAATTTATTTAAAAAACTTTGAAAATATAGAGTTAATAGCAGAAGAATTAAAGCATACCAGTCTAGATGATAT GTTAAAAATGGGACAGGATTTAATTAAGAATAAAAAATTAGAGTGTAAGAAATTATTTAAGGAGATTAGGGCAAATAAAC TTAAGGTTGATAACTATTCCTATAATGATACTGTAGATGATGGTATTTCCCCATTTTTTAAAGAATATGATGATTTTTTT GCATCTCATGAAACTCCAGGATGTTCAATAGATTATCAGCTTTATATTGATACTATGAACTTTATAGGCATTGAGTATGT GTATAATTATTTATATGACTTAAGCTTAGAAAATGAGTTTTGTAATAAATTTGATATTGGTGAAATTAATAAATTATTAA AGGGTTATGATAAAAAATGTGAATTGTTGCTTATAAATATATTTGAACTAGTACTTATCAATTCACTAGGGTTAATTATA TGTAATAAAGATTTAAGCAGCCTTAATATTAATAATTTAGATAGAGAGATTATAAAAAATAAATTGGAAGAGTTATCCAT AGGGGAACTGAATGCAGAATTAATAAAAGATGCAAAAATATGCTTAGAAATTTTAGAGATTAAAAATACAGAATTGATGA CTTATATAAAGAAGGGTATTTTAAATATAGCTCTACTGATAAATGAAAGGATAAAATTAAACAAATTAGAAACAGTATTT ATATCCTTTAATGAAGAGGAGTCCAATGAAATAATAGAATATACTGATGGTATAAAAATGGCCAATTCTAAATTTAAAAA GCTAACGGAAGAAATTCGAGAGTGCTCTTTAGTGGAAGATAAAATTTTATTAATTAAAAATAATATTAAGAGCTTAGAAG ATTTAGTAGACATGTTAAATTCTGAGTGTTTATTTGGAGATGAATATATTACGTTTTTCAAAAGCTTATCCAAAATGGAA ATAGTTCTCTTATCTAAATATATATCAGATTTAAGTTTTGAATATGAAAAAGATCTATATGTTGAGTTTAATAAATATAT CTTAAGCTTAAGGAAAGAAGAACAAAGAGAAATAAGTGAATTAAAAGAAAAAATAAATTTATAA
Upstream 100 bases:
>100_bases GGAAATTTTAGAAGGAAAAGTATTATATAAAATAGCTGAGAATATAAGAAATGGTTTTAAGGATTATACAAATCTTGATA ATGAAAAGGATTGATGAGTT
Downstream 100 bases:
>100_bases TATGGTAGAAAATTTAATAAGGGTATTTGAAGAAAGGAAGTCTTAATCTATGAAAGTTTATTGACTTTAATATAGTATTT TATTCAAATGATATTAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MENTIQKYDYSVENKFSEESFLKDVLVTCYEKKLLDDNILARIYYERMELLRVKLKYYTKDESSSVMVEVAESILQCIDY TIGIYLKNFENIELIAEELKHTSLDDMLKMGQDLIKNKKLECKKLFKEIRANKLKVDNYSYNDTVDDGISPFFKEYDDFF ASHETPGCSIDYQLYIDTMNFIGIEYVYNYLYDLSLENEFCNKFDIGEINKLLKGYDKKCELLLINIFELVLINSLGLII CNKDLSSLNINNLDREIIKNKLEELSIGELNAELIKDAKICLEILEIKNTELMTYIKKGILNIALLINERIKLNKLETVF ISFNEEESNEIIEYTDGIKMANSKFKKLTEEIRECSLVEDKILLIKNNIKSLEDLVDMLNSECLFGDEYITFFKSLSKME IVLLSKYISDLSFEYEKDLYVEFNKYILSLRKEEQREISELKEKINL
Sequences:
>Translated_447_residues MENTIQKYDYSVENKFSEESFLKDVLVTCYEKKLLDDNILARIYYERMELLRVKLKYYTKDESSSVMVEVAESILQCIDY TIGIYLKNFENIELIAEELKHTSLDDMLKMGQDLIKNKKLECKKLFKEIRANKLKVDNYSYNDTVDDGISPFFKEYDDFF ASHETPGCSIDYQLYIDTMNFIGIEYVYNYLYDLSLENEFCNKFDIGEINKLLKGYDKKCELLLINIFELVLINSLGLII CNKDLSSLNINNLDREIIKNKLEELSIGELNAELIKDAKICLEILEIKNTELMTYIKKGILNIALLINERIKLNKLETVF ISFNEEESNEIIEYTDGIKMANSKFKKLTEEIRECSLVEDKILLIKNNIKSLEDLVDMLNSECLFGDEYITFFKSLSKME IVLLSKYISDLSFEYEKDLYVEFNKYILSLRKEEQREISELKEKINL >Mature_447_residues MENTIQKYDYSVENKFSEESFLKDVLVTCYEKKLLDDNILARIYYERMELLRVKLKYYTKDESSSVMVEVAESILQCIDY TIGIYLKNFENIELIAEELKHTSLDDMLKMGQDLIKNKKLECKKLFKEIRANKLKVDNYSYNDTVDDGISPFFKEYDDFF ASHETPGCSIDYQLYIDTMNFIGIEYVYNYLYDLSLENEFCNKFDIGEINKLLKGYDKKCELLLINIFELVLINSLGLII CNKDLSSLNINNLDREIIKNKLEELSIGELNAELIKDAKICLEILEIKNTELMTYIKKGILNIALLINERIKLNKLETVF ISFNEEESNEIIEYTDGIKMANSKFKKLTEEIRECSLVEDKILLIKNNIKSLEDLVDMLNSECLFGDEYITFFKSLSKME IVLLSKYISDLSFEYEKDLYVEFNKYILSLRKEEQREISELKEKINL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52630; Mature: 52630
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENTIQKYDYSVENKFSEESFLKDVLVTCYEKKLLDDNILARIYYERMELLRVKLKYYTK CCCCHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC DESSSVMVEVAESILQCIDYTIGIYLKNFENIELIAEELKHTSLDDMLKMGQDLIKNKKL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC ECKKLFKEIRANKLKVDNYSYNDTVDDGISPFFKEYDDFFASHETPGCSIDYQLYIDTMN HHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEHHH FIGIEYVYNYLYDLSLENEFCNKFDIGEINKLLKGYDKKCELLLINIFELVLINSLGLII HHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEE CNKDLSSLNINNLDREIIKNKLEELSIGELNAELIKDAKICLEILEIKNTELMTYIKKGI ECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LNIALLINERIKLNKLETVFISFNEEESNEIIEYTDGIKMANSKFKKLTEEIRECSLVED HHHHHHHHCCCEECCEEEEEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH KILLIKNNIKSLEDLVDMLNSECLFGDEYITFFKSLSKMEIVLLSKYISDLSFEYEKDLY HHEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH VEFNKYILSLRKEEQREISELKEKINL HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MENTIQKYDYSVENKFSEESFLKDVLVTCYEKKLLDDNILARIYYERMELLRVKLKYYTK CCCCHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC DESSSVMVEVAESILQCIDYTIGIYLKNFENIELIAEELKHTSLDDMLKMGQDLIKNKKL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC ECKKLFKEIRANKLKVDNYSYNDTVDDGISPFFKEYDDFFASHETPGCSIDYQLYIDTMN HHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEHHH FIGIEYVYNYLYDLSLENEFCNKFDIGEINKLLKGYDKKCELLLINIFELVLINSLGLII HHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEE CNKDLSSLNINNLDREIIKNKLEELSIGELNAELIKDAKICLEILEIKNTELMTYIKKGI ECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LNIALLINERIKLNKLETVFISFNEEESNEIIEYTDGIKMANSKFKKLTEEIRECSLVED HHHHHHHHCCCEECCEEEEEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH KILLIKNNIKSLEDLVDMLNSECLFGDEYITFFKSLSKMEIVLLSKYISDLSFEYEKDLY HHEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH VEFNKYILSLRKEEQREISELKEKINL HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA