Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170754449

Identifier: 170754449

GI number: 170754449

Start: 790431

End: 790898

Strand: Direct

Name: 170754449

Synonym: CLD_0094

Alternate gene names: NA

Gene position: 790431-790898 (Clockwise)

Preceding gene: 170757850

Following gene: 170754605

Centisome position: 19.97

GC content: 24.15

Gene sequence:

>468_bases
ATGAAAAATTCTATTGATTTATTTCAAAGCAATTCACTAGAAAAACAAGTTTTTAATGACATAATTCAGTGCAATGAAGT
TACAAGAGAATATGGATTAAAACTTTCAGAAAAAGATGTTAAAGAAATTATTGATACACGAAATATAGCACTTCAAAAAA
GCGGAAGAATAGAATTTAATGGTCAAATTATAAATAAAATTATTACGTCCTTTTGTGATTCACCATATATATCCCAATAT
AATTACGGTGAAACAATAAATGAACTTGTAGAAATTTTTTATAATTATAAGAATGAAACGTTAGACTATATAAGTGATGA
TGAATTAATAGAAATTATGAAGGAAAAGTTTGATAACTATTGCCAAGGATCATTGGAAATTTTAGAAGGAAAAGTATTAT
ATAAAATAGCTGAGAATATAAGAAATGGTTTTAAGGATTATACAAATCTTGATAATGAAAAGGATTGA

Upstream 100 bases:

>100_bases
AAAAAGGTGTCAATGATACAATTATCTATTATAAATCATAATATTTTAATCATAACATATTTTAAAGTAAAAGTCAATAC
TTTTAGGAGGAATTTTTAAA

Downstream 100 bases:

>100_bases
TGAGTTATGGAGAACACTATTCAAAAATATGACTATTCTGTAGAGAATAAATTTAGTGAGGAAAGTTTTTTAAAAGATGT
TTTAGTAACTTGCTATGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MKNSIDLFQSNSLEKQVFNDIIQCNEVTREYGLKLSEKDVKEIIDTRNIALQKSGRIEFNGQIINKIITSFCDSPYISQY
NYGETINELVEIFYNYKNETLDYISDDELIEIMKEKFDNYCQGSLEILEGKVLYKIAENIRNGFKDYTNLDNEKD

Sequences:

>Translated_155_residues
MKNSIDLFQSNSLEKQVFNDIIQCNEVTREYGLKLSEKDVKEIIDTRNIALQKSGRIEFNGQIINKIITSFCDSPYISQY
NYGETINELVEIFYNYKNETLDYISDDELIEIMKEKFDNYCQGSLEILEGKVLYKIAENIRNGFKDYTNLDNEKD
>Mature_155_residues
MKNSIDLFQSNSLEKQVFNDIIQCNEVTREYGLKLSEKDVKEIIDTRNIALQKSGRIEFNGQIINKIITSFCDSPYISQY
NYGETINELVEIFYNYKNETLDYISDDELIEIMKEKFDNYCQGSLEILEGKVLYKIAENIRNGFKDYTNLDNEKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18203; Mature: 18203

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSIDLFQSNSLEKQVFNDIIQCNEVTREYGLKLSEKDVKEIIDTRNIALQKSGRIEFN
CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEC
GQIINKIITSFCDSPYISQYNYGETINELVEIFYNYKNETLDYISDDELIEIMKEKFDNY
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHH
CQGSLEILEGKVLYKIAENIRNGFKDYTNLDNEKD
HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKNSIDLFQSNSLEKQVFNDIIQCNEVTREYGLKLSEKDVKEIIDTRNIALQKSGRIEFN
CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEC
GQIINKIITSFCDSPYISQYNYGETINELVEIFYNYKNETLDYISDDELIEIMKEKFDNY
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHH
CQGSLEILEGKVLYKIAENIRNGFKDYTNLDNEKD
HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA