| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754531
Identifier: 170754531
GI number: 170754531
Start: 1114820
End: 1115590
Strand: Direct
Name: 170754531
Synonym: CLD_3562
Alternate gene names: NA
Gene position: 1114820-1115590 (Clockwise)
Preceding gene: 170757155
Following gene: 170755538
Centisome position: 28.16
GC content: 26.59
Gene sequence:
>771_bases ATGTCTATATCATTAGCATTAGTTCCTGCAGTTTTAACTCTTAAAGTTGTTATGAATGAAAAAGACCTTGATAACTGGGT AGAAAATTCTAAAATAAATATGCCAACAACATTAAAGAATGAGGAAGAGATTATTAAAACTTTGAAGCAGGCAGGATATA AAATAAATAAATATGGAAATTTATTTAAGACAGAGATAAATGGAGAAAATGAATTTATTACTTGGGAAAAGAAAAAAGGA ATATGGAATGTTGTATTTTCAAAATATGATTCCAAAGAAATGATAGTTGATTTCATAATGAATTTAAATAATAAGGCAGG TAGAAAGGTTATATATAAGTCAATTGAAGAGATGGAAAATAGAAATGAAAACTCAACAACAGTGGAAGAAATATTAGAAC TTCCCAAGGTAGAGAAAGAAATTTTCCCTACTAATTTTCGAGATAAGAATTTACTTTTAAAAACTCTTAAAGAGTGCGGA ACTTATCCTAAAGAGATATCTAACGAAGATATTCAGTGTAATACTAAAGAGTGCCAATTAATTTTTCATAAAGAAGAGGA TGGAAGTTATAATGTTGAAATTGAAGATACATCTTCATTAAAAAATGTTCATCATCATCTTAGTATAATAGATGAAGAAT ATAAACATAATGTGCAAGAGTACACCTATAAAAAGGTAGTTGAAAAATTAAATGAAACAGATATGTATATAGATAATGAA GAAGTACTTGAAGACAATTCTATACTTTTAACTGTTAATATAGGAGACTAA
Upstream 100 bases:
>100_bases TAGAAGTAAATGAAGAAAAAAAAGATGAAAAAAAGGGAGAAGATGATATAAGAATATCTAGAGGTGGTAGAACTATAGAT TTTTAAAGGAGGTATAAACT
Downstream 100 bases:
>100_bases AAAGTGCAATAGGAGAATATATGACGAAATATATAATAAATTGAATATTATTTTATAAAAAGATATACACAAAATAAATT TCTGTATATCTTTTTGCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSISLALVPAVLTLKVVMNEKDLDNWVENSKINMPTTLKNEEEIIKTLKQAGYKINKYGNLFKTEINGENEFITWEKKKG IWNVVFSKYDSKEMIVDFIMNLNNKAGRKVIYKSIEEMENRNENSTTVEEILELPKVEKEIFPTNFRDKNLLLKTLKECG TYPKEISNEDIQCNTKECQLIFHKEEDGSYNVEIEDTSSLKNVHHHLSIIDEEYKHNVQEYTYKKVVEKLNETDMYIDNE EVLEDNSILLTVNIGD
Sequences:
>Translated_256_residues MSISLALVPAVLTLKVVMNEKDLDNWVENSKINMPTTLKNEEEIIKTLKQAGYKINKYGNLFKTEINGENEFITWEKKKG IWNVVFSKYDSKEMIVDFIMNLNNKAGRKVIYKSIEEMENRNENSTTVEEILELPKVEKEIFPTNFRDKNLLLKTLKECG TYPKEISNEDIQCNTKECQLIFHKEEDGSYNVEIEDTSSLKNVHHHLSIIDEEYKHNVQEYTYKKVVEKLNETDMYIDNE EVLEDNSILLTVNIGD >Mature_255_residues SISLALVPAVLTLKVVMNEKDLDNWVENSKINMPTTLKNEEEIIKTLKQAGYKINKYGNLFKTEINGENEFITWEKKKGI WNVVFSKYDSKEMIVDFIMNLNNKAGRKVIYKSIEEMENRNENSTTVEEILELPKVEKEIFPTNFRDKNLLLKTLKECGT YPKEISNEDIQCNTKECQLIFHKEEDGSYNVEIEDTSSLKNVHHHLSIIDEEYKHNVQEYTYKKVVEKLNETDMYIDNEE VLEDNSILLTVNIGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29927; Mature: 29796
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISLALVPAVLTLKVVMNEKDLDNWVENSKINMPTTLKNEEEIIKTLKQAGYKINKYGN CCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCC LFKTEINGENEFITWEKKKGIWNVVFSKYDSKEMIVDFIMNLNNKAGRKVIYKSIEEMEN EEEEEECCCCCEEEEECCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHC RNENSTTVEEILELPKVEKEIFPTNFRDKNLLLKTLKECGTYPKEISNEDIQCNTKECQL CCCCCHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCEECCCEEEE IFHKEEDGSYNVEIEDTSSLKNVHHHLSIIDEEYKHNVQEYTYKKVVEKLNETDMYIDNE EEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCH EVLEDNSILLTVNIGD HHHCCCCEEEEEECCC >Mature Secondary Structure SISLALVPAVLTLKVVMNEKDLDNWVENSKINMPTTLKNEEEIIKTLKQAGYKINKYGN CCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCC LFKTEINGENEFITWEKKKGIWNVVFSKYDSKEMIVDFIMNLNNKAGRKVIYKSIEEMEN EEEEEECCCCCEEEEECCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHC RNENSTTVEEILELPKVEKEIFPTNFRDKNLLLKTLKECGTYPKEISNEDIQCNTKECQL CCCCCHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCEECCCEEEE IFHKEEDGSYNVEIEDTSSLKNVHHHLSIIDEEYKHNVQEYTYKKVVEKLNETDMYIDNE EEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCH EVLEDNSILLTVNIGD HHHCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA