| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is lctP
Identifier: 170755538
GI number: 170755538
Start: 1116071
End: 1117594
Strand: Direct
Name: lctP
Synonym: CLD_3561
Alternate gene names: 170755538
Gene position: 1116071-1117594 (Clockwise)
Preceding gene: 170754531
Following gene: 170756582
Centisome position: 28.2
GC content: 34.19
Gene sequence:
>1524_bases ATGAATATGTATCTAACGTGTTTCATTGCTTTGGTGCCTATAGCTTGGTTAATGGTTTCATTAGGAATTTTAAAAATGCC AGGTTATAAAACTTGTCCTGCAACATTGGTATTAACTGCAATTTTAGCAGTTATAGTATGGAAAATGCCAATTTTAGATG CAGCTTCTGCTGCTTTAGAAGGAACGGCATTGGCTTTATGGCCTATAATACTTGTAATCGTTGCTGCAGTATTTACCTAT AATTTATCAATTTATACTAAAAGTATGGATACTATAAAAAAGATGATGACTTCAATAACTACAGATAAGAGAATTTTGGT TTTAATACTTGCTTGGGGATTTGGCGGATTTTTGGAGGCTATAGCAGGGTTTGGTACTGCAGTTGCTATTCCTGCAAGTA TAATGGCAGCACTTGGATTTGACCCTGTTTTTGCAGCTATAATATGTCTTATAGCAAACACTACACCTACAGCTTTTGGA GGTATAGGAATTCCAGTAACAACTCTTGCTAAGGTAACTAACATAGATGTAATTCAACTTAGTTATGCAGTAGGATTACA GTTATCAGTTCTAATAGTCATAATTCCAATAGTTTTAGTAATGCTAACAGGAAAAAGTGTGAAATCTATTAAGGGTGTCT TTGGAATAGCCCTAGCTTCAGGTCTTTCATTTGCAATACCAGAATTATTAATGGCTAAGTATATGGGGGCAGAATTACCA GCTATATTAGGGTCAATAACATGTATGGTAGTAACTATAGCTATGGCAAAGATATTTTATAAAGATACTGCTTCTAAAAA TGTAGAAAAAATACCTTTTAAAAAGGCAGTTATAGCATGGTTACCCTTTATATTAGTTTTTGTTTTCATAATTTTAACTA GTCCATTGTTCCCAGCAATAAATAAAGGATTATCTCAAATACAAACAACTCTTTACATTTATACAGGCGCCCATGCTAAG CCATTTACATTCTTGTGGCTTGCTACACCAGGAACATTAATTATAATAGCTACTTTTATAGGAGGATTAATACAAGGTGC TAAGTTTTCTGAAATAGTTTCAGTATTAGTAAAAACTATAAAGCAAATGAGTAAATCTGCAATAACAATAATAGCCATAG TAGCTATGGCAAAGATTATGGGATATAGCGGAATGATAAAATCAATAGCAGTTGTGTTAGTAGCGGTTACAGGTAGTTAC TATCCTTTAATATCACCTATAATCGGGGCTTTAGGAACTTTTGTAACAGGCAGTGATACTTCATCTAATGTATTATTTGG AGGACTTCAAGTTGAAGTAGCTAAGACTTTAGGATTAAATCCGTACTGGCTTGCAGCAGCTAATACTGGTGGTGCTACTG CGGGTAAGATGATATCACCACAAAGCATAGCAGTGGCTACAGCAGCTACTGGACTTGTTGGAGCAGAAGGTAAAATATTA AATGCGACTATAAAATTTTGTATAGTTTACGTAATTGTTTTAGGAATCATGGCTTATTTTATGGCACCTGTGTTTGGATT CTAA
Upstream 100 bases:
>100_bases CCAAAGTTAAGAAAATAACTATTATAGAAATCTTATGAAAAGTGGAGTAAAATGAAAACAATAAGAGGTCGTACCATATT ACCGTAAGGGGGAAACCTAT
Downstream 100 bases:
>100_bases TTGCTTAAACTAATGAGGAGGATGAAATATGGCAAAGATAAAAATACCATATCACAAGAAAATGATTGAAATAGGGATAG AAGATAAAAATTTAGTAGGA
Product: L-lactate permease
Products: lactate [Cytoplasm]; Proton [Cytoplasm]; glycolate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 507; Mature: 507
Protein sequence:
>507_residues MNMYLTCFIALVPIAWLMVSLGILKMPGYKTCPATLVLTAILAVIVWKMPILDAASAALEGTALALWPIILVIVAAVFTY NLSIYTKSMDTIKKMMTSITTDKRILVLILAWGFGGFLEAIAGFGTAVAIPASIMAALGFDPVFAAIICLIANTTPTAFG GIGIPVTTLAKVTNIDVIQLSYAVGLQLSVLIVIIPIVLVMLTGKSVKSIKGVFGIALASGLSFAIPELLMAKYMGAELP AILGSITCMVVTIAMAKIFYKDTASKNVEKIPFKKAVIAWLPFILVFVFIILTSPLFPAINKGLSQIQTTLYIYTGAHAK PFTFLWLATPGTLIIIATFIGGLIQGAKFSEIVSVLVKTIKQMSKSAITIIAIVAMAKIMGYSGMIKSIAVVLVAVTGSY YPLISPIIGALGTFVTGSDTSSNVLFGGLQVEVAKTLGLNPYWLAAANTGGATAGKMISPQSIAVATAATGLVGAEGKIL NATIKFCIVYVIVLGIMAYFMAPVFGF
Sequences:
>Translated_507_residues MNMYLTCFIALVPIAWLMVSLGILKMPGYKTCPATLVLTAILAVIVWKMPILDAASAALEGTALALWPIILVIVAAVFTY NLSIYTKSMDTIKKMMTSITTDKRILVLILAWGFGGFLEAIAGFGTAVAIPASIMAALGFDPVFAAIICLIANTTPTAFG GIGIPVTTLAKVTNIDVIQLSYAVGLQLSVLIVIIPIVLVMLTGKSVKSIKGVFGIALASGLSFAIPELLMAKYMGAELP AILGSITCMVVTIAMAKIFYKDTASKNVEKIPFKKAVIAWLPFILVFVFIILTSPLFPAINKGLSQIQTTLYIYTGAHAK PFTFLWLATPGTLIIIATFIGGLIQGAKFSEIVSVLVKTIKQMSKSAITIIAIVAMAKIMGYSGMIKSIAVVLVAVTGSY YPLISPIIGALGTFVTGSDTSSNVLFGGLQVEVAKTLGLNPYWLAAANTGGATAGKMISPQSIAVATAATGLVGAEGKIL NATIKFCIVYVIVLGIMAYFMAPVFGF >Mature_507_residues MNMYLTCFIALVPIAWLMVSLGILKMPGYKTCPATLVLTAILAVIVWKMPILDAASAALEGTALALWPIILVIVAAVFTY NLSIYTKSMDTIKKMMTSITTDKRILVLILAWGFGGFLEAIAGFGTAVAIPASIMAALGFDPVFAAIICLIANTTPTAFG GIGIPVTTLAKVTNIDVIQLSYAVGLQLSVLIVIIPIVLVMLTGKSVKSIKGVFGIALASGLSFAIPELLMAKYMGAELP AILGSITCMVVTIAMAKIFYKDTASKNVEKIPFKKAVIAWLPFILVFVFIILTSPLFPAINKGLSQIQTTLYIYTGAHAK PFTFLWLATPGTLIIIATFIGGLIQGAKFSEIVSVLVKTIKQMSKSAITIIAIVAMAKIMGYSGMIKSIAVVLVAVTGSY YPLISPIIGALGTFVTGSDTSSNVLFGGLQVEVAKTLGLNPYWLAAANTGGATAGKMISPQSIAVATAATGLVGAEGKIL NATIKFCIVYVIVLGIMAYFMAPVFGF
Specific function: Plays a role in L-lactate utilization [H]
COG id: COG1620
COG function: function code C; L-lactate permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lactate permease family [H]
Homologues:
Organism=Escherichia coli, GI1789347, Length=546, Percent_Identity=36.6300366300366, Blast_Score=284, Evalue=1e-77, Organism=Escherichia coli, GI1790031, Length=536, Percent_Identity=34.3283582089552, Blast_Score=265, Evalue=7e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003804 [H]
Pfam domain/function: PF02652 Lactate_perm [H]
EC number: NA
Molecular weight: Translated: 53298; Mature: 53298
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMYLTCFIALVPIAWLMVSLGILKMPGYKTCPATLVLTAILAVIVWKMPILDAASAALE CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GTALALWPIILVIVAAVFTYNLSIYTKSMDTIKKMMTSITTDKRILVLILAWGFGGFLEA CHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCCCHHEEEEEHHCHHHHHHH IAGFGTAVAIPASIMAALGFDPVFAAIICLIANTTPTAFGGIGIPVTTLAKVTNIDVIQL HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCEEEEE SYAVGLQLSVLIVIIPIVLVMLTGKSVKSIKGVFGIALASGLSFAIPELLMAKYMGAELP HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHH AILGSITCMVVTIAMAKIFYKDTASKNVEKIPFKKAVIAWLPFILVFVFIILTSPLFPAI HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH NKGLSQIQTTLYIYTGAHAKPFTFLWLATPGTLIIIATFIGGLIQGAKFSEIVSVLVKTI HHHHHHHHHEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KQMSKSAITIIAIVAMAKIMGYSGMIKSIAVVLVAVTGSYYPLISPIIGALGTFVTGSDT HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC SSNVLFGGLQVEVAKTLGLNPYWLAAANTGGATAGKMISPQSIAVATAATGLVGAEGKIL CCCEEEECEEEEEHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHH NATIKFCIVYVIVLGIMAYFMAPVFGF HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNMYLTCFIALVPIAWLMVSLGILKMPGYKTCPATLVLTAILAVIVWKMPILDAASAALE CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GTALALWPIILVIVAAVFTYNLSIYTKSMDTIKKMMTSITTDKRILVLILAWGFGGFLEA CHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCCCHHEEEEEHHCHHHHHHH IAGFGTAVAIPASIMAALGFDPVFAAIICLIANTTPTAFGGIGIPVTTLAKVTNIDVIQL HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCEEEEE SYAVGLQLSVLIVIIPIVLVMLTGKSVKSIKGVFGIALASGLSFAIPELLMAKYMGAELP HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHH AILGSITCMVVTIAMAKIFYKDTASKNVEKIPFKKAVIAWLPFILVFVFIILTSPLFPAI HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH NKGLSQIQTTLYIYTGAHAKPFTFLWLATPGTLIIIATFIGGLIQGAKFSEIVSVLVKTI HHHHHHHHHEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KQMSKSAITIIAIVAMAKIMGYSGMIKSIAVVLVAVTGSYYPLISPIIGALGTFVTGSDT HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC SSNVLFGGLQVEVAKTLGLNPYWLAAANTGGATAGKMISPQSIAVATAATGLVGAEGKIL CCCEEEECEEEEEHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHH NATIKFCIVYVIVLGIMAYFMAPVFGF HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: lactate [Periplasm]; Proton [Periplasm]; glycolate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + lactate [Periplasm] = Proton [Cytoplasm] + lactate [Cytoplasm] Proton [Periplasm] + glycolate [Periplasm] = Proton [Cytoplasm] + glycolate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10508058 [H]