| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754506
Identifier: 170754506
GI number: 170754506
Start: 1510313
End: 1510921
Strand: Direct
Name: 170754506
Synonym: CLD_3189
Alternate gene names: NA
Gene position: 1510313-1510921 (Clockwise)
Preceding gene: 170757611
Following gene: 170755167
Centisome position: 38.16
GC content: 24.47
Gene sequence:
>609_bases ATGGTATTAATTAAAGAACAAAATAAAGTTAAAATGGATGTAATGTGGAAGAAGTTTAATGGTATAGGATTAGAACATCT ATTTTTATTGAAAGATAATGAGAGTATTAAAGTAAATTCAGTTATTCTAACAATGAAAGAGGATATGCCAGTTCGTATAC TTTATAATATATACTGTAATCTAGATTGGAAAGTTAAAAAATTTGATATACAGATATTTTATGATAAACATAAAAATATT ATATTACAATCAGATGGCAATGGAATTTGGACAACTGATACTAATGAATTAGTAGAAGATTTGAAAGGTTGTATAGATAT TGACATTTCTGTTACACCTTTTACGAATACAATTCCCATCAGGCGTTTATTATTAAATGTAGGAGAGTCAAAAGAAATAA AAGTAGTTTATGTTGATATTTATAATTATAGTTTAACACCTGTAAGACAGCGGTATACTTGCCTAAACTCAAATCTTAAA GGTTATAAATATAGATATGAAAATTTAAATAATGGATTTATAGCAGAATTTTTTGTAGATAAAGAAGGTTTTGTTATAGA TTACCCAGATCTATTTAAAAGGATTTATAATATTGAAAATCAAAAATAG
Upstream 100 bases:
>100_bases TAACAACTAATGACTACATAGAATTCAATATTTATATTGACCCGCAAACATATGTTTGGTAAAATTGCCTAAAATAGATT TTTAAGGAAGGGTGGAAGGT
Downstream 100 bases:
>100_bases TTTTATTATCATTAATACATTTAGTATTAGTCTAAATTTATTAAAATTAAGAAATGTTTTAAATTATGGTTAATATATTA AAGAGGATGAAAATGTTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MVLIKEQNKVKMDVMWKKFNGIGLEHLFLLKDNESIKVNSVILTMKEDMPVRILYNIYCNLDWKVKKFDIQIFYDKHKNI ILQSDGNGIWTTDTNELVEDLKGCIDIDISVTPFTNTIPIRRLLLNVGESKEIKVVYVDIYNYSLTPVRQRYTCLNSNLK GYKYRYENLNNGFIAEFFVDKEGFVIDYPDLFKRIYNIENQK
Sequences:
>Translated_202_residues MVLIKEQNKVKMDVMWKKFNGIGLEHLFLLKDNESIKVNSVILTMKEDMPVRILYNIYCNLDWKVKKFDIQIFYDKHKNI ILQSDGNGIWTTDTNELVEDLKGCIDIDISVTPFTNTIPIRRLLLNVGESKEIKVVYVDIYNYSLTPVRQRYTCLNSNLK GYKYRYENLNNGFIAEFFVDKEGFVIDYPDLFKRIYNIENQK >Mature_202_residues MVLIKEQNKVKMDVMWKKFNGIGLEHLFLLKDNESIKVNSVILTMKEDMPVRILYNIYCNLDWKVKKFDIQIFYDKHKNI ILQSDGNGIWTTDTNELVEDLKGCIDIDISVTPFTNTIPIRRLLLNVGESKEIKVVYVDIYNYSLTPVRQRYTCLNSNLK GYKYRYENLNNGFIAEFFVDKEGFVIDYPDLFKRIYNIENQK
Specific function: Unknown
COG id: COG3554
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23931; Mature: 23931
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLIKEQNKVKMDVMWKKFNGIGLEHLFLLKDNESIKVNSVILTMKEDMPVRILYNIYCN CEEEECCCCEEEEEEEEECCCCCEEEEEEEECCCCEEEEEEEEEEECCCCEEEEEEEEEE LDWKVKKFDIQIFYDKHKNIILQSDGNGIWTTDTNELVEDLKGCIDIDISVTPFTNTIPI CCEEEEEEEEEEEEECCCEEEEEECCCEEEECCHHHHHHHHCCEEEEEEEECCCCCCHHH RRLLLNVGESKEIKVVYVDIYNYSLTPVRQRYTCLNSNLKGYKYRYENLNNGFIAEFFVD HHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEEC KEGFVIDYPDLFKRIYNIENQK CCCCEEECHHHHHHHHCCCCCC >Mature Secondary Structure MVLIKEQNKVKMDVMWKKFNGIGLEHLFLLKDNESIKVNSVILTMKEDMPVRILYNIYCN CEEEECCCCEEEEEEEEECCCCCEEEEEEEECCCCEEEEEEEEEEECCCCEEEEEEEEEE LDWKVKKFDIQIFYDKHKNIILQSDGNGIWTTDTNELVEDLKGCIDIDISVTPFTNTIPI CCEEEEEEEEEEEEECCCEEEEEECCCEEEECCHHHHHHHHCCEEEEEEEECCCCCCHHH RRLLLNVGESKEIKVVYVDIYNYSLTPVRQRYTCLNSNLKGYKYRYENLNNGFIAEFFVD HHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEEC KEGFVIDYPDLFKRIYNIENQK CCCCEEECHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA