| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is maeB [C]
Identifier: 170754503
GI number: 170754503
Start: 307908
End: 309080
Strand: Direct
Name: maeB [C]
Synonym: CLD_0518
Alternate gene names: 170754503
Gene position: 307908-309080 (Clockwise)
Preceding gene: 170756684
Following gene: 170757488
Centisome position: 7.78
GC content: 33.59
Gene sequence:
>1173_bases ATGAATTATTTTGAAGAAAGCTTAAAACTACATGAAGATAATAGAGGAAAAATAGAAATAAAATCAAAGATGGAAGTTAA AACAAGAGATGATTTAAGTTTGGCTTATACGCCTGGAGTTGCAGAGCCATGTAGAAAGATTCATGAAAACGAAGAAAATG TTTATAAATATACTTCAAAAGGAAATATGGTTGCAGTAGTTACAGATGGAACGGCAGTATTAGGATTAGGAGATATAGGG CCTAAGGCTGGATTACCAGTTATGGAAGGGAAAGCTCTTTTGTTTAAAGAGTTTGCAAATGTTGATGCATTTCCAATATG CTTAGATACAAAAGATGTTGATGAAATAGTAAAAACTGTAAAACTTATAGCTCCAGGATTTGGCGGAATTAATTTAGAAG ATATTGGAGCTCCAAGATGCTTTGAAATAGAAGAGAAGCTAAAGAAAGAACTTGATATACCTGTATTTCATGATGATCAA CATGGAACTGCAATAGTTGTTCTTGCAGGGGTAATAAATGCTCTAAAAGTAGTTAATAAGAAAATAGAAGACGTAAAGGT TGTTGTAAATGGTGCAGGAGCTGCAGGAACTGCCATAACTAAACTATTACTTTCTTTAGGAGTAAAAAATCTAATTGTAT GTGATAAGATTGGTATTCTTTATGAAGGAATAGAAAATGTAGATGATGCAAAGAAGGAACTTTCAAAGGTAACAAATCCA GAAAATATTAAAGGAACTTTAGCTGATGCATTAATAGGTGCAGATGTATTTATAGGGGTTTCAGCTCCAGGAATAGTAAG TAAAGATATGGTAAAAACAATGAATAAGGATTCTATAATATTTGCTATGGCAAACCCAACTCCAGAAATAATGCCAGATT TGGCAAAAGAAGCAGGGGCTAAGGTAATTGGAACAGGAAGATCAGACTTCCCTAACCAAGTTAACAATGTGCTTGCATTC CCAGGAATATTTAAGGGTGCATTGGATGTTAGAGCAAAAGAAATTAATGAAGAAATGAAAATAGCAGCAGCATATGCTAT AGCTTCTATGATAAAAGATGAGGACTTAAATGAGGACAATGTAATTCATTATGCATTAGATAGATCTGTTGCAGACAATG TAGCAAAAGCAATAAAAGAAGCAGCGAGAAAAAGCGGAGTAGCTAGAGTATAA
Upstream 100 bases:
>100_bases TTTAAAGTTTAAAATATTTTAATAATTTAAACTTGATGTTATGCTTTATTCAAAGCAAACGATTACAGAAATCATATAAA AGTGAAAGGATGTTATAAGA
Downstream 100 bases:
>100_bases ACAGAATTCTTAGGAGTTTTACTCCTTAGAAGTCGTTATCCTTTAGGAGAAATCGTTATCCAGGGACGTAACCGCTCTTT ACTCCCACTTTGAAGAAAAG
Product: malic enzyme
Products: NA
Alternate protein names: NAD-ME [H]
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MNYFEESLKLHEDNRGKIEIKSKMEVKTRDDLSLAYTPGVAEPCRKIHENEENVYKYTSKGNMVAVVTDGTAVLGLGDIG PKAGLPVMEGKALLFKEFANVDAFPICLDTKDVDEIVKTVKLIAPGFGGINLEDIGAPRCFEIEEKLKKELDIPVFHDDQ HGTAIVVLAGVINALKVVNKKIEDVKVVVNGAGAAGTAITKLLLSLGVKNLIVCDKIGILYEGIENVDDAKKELSKVTNP ENIKGTLADALIGADVFIGVSAPGIVSKDMVKTMNKDSIIFAMANPTPEIMPDLAKEAGAKVIGTGRSDFPNQVNNVLAF PGIFKGALDVRAKEINEEMKIAAAYAIASMIKDEDLNEDNVIHYALDRSVADNVAKAIKEAARKSGVARV
Sequences:
>Translated_390_residues MNYFEESLKLHEDNRGKIEIKSKMEVKTRDDLSLAYTPGVAEPCRKIHENEENVYKYTSKGNMVAVVTDGTAVLGLGDIG PKAGLPVMEGKALLFKEFANVDAFPICLDTKDVDEIVKTVKLIAPGFGGINLEDIGAPRCFEIEEKLKKELDIPVFHDDQ HGTAIVVLAGVINALKVVNKKIEDVKVVVNGAGAAGTAITKLLLSLGVKNLIVCDKIGILYEGIENVDDAKKELSKVTNP ENIKGTLADALIGADVFIGVSAPGIVSKDMVKTMNKDSIIFAMANPTPEIMPDLAKEAGAKVIGTGRSDFPNQVNNVLAF PGIFKGALDVRAKEINEEMKIAAAYAIASMIKDEDLNEDNVIHYALDRSVADNVAKAIKEAARKSGVARV >Mature_390_residues MNYFEESLKLHEDNRGKIEIKSKMEVKTRDDLSLAYTPGVAEPCRKIHENEENVYKYTSKGNMVAVVTDGTAVLGLGDIG PKAGLPVMEGKALLFKEFANVDAFPICLDTKDVDEIVKTVKLIAPGFGGINLEDIGAPRCFEIEEKLKKELDIPVFHDDQ HGTAIVVLAGVINALKVVNKKIEDVKVVVNGAGAAGTAITKLLLSLGVKNLIVCDKIGILYEGIENVDDAKKELSKVTNP ENIKGTLADALIGADVFIGVSAPGIVSKDMVKTMNKDSIIFAMANPTPEIMPDLAKEAGAKVIGTGRSDFPNQVNNVLAF PGIFKGALDVRAKEINEEMKIAAAYAIASMIKDEDLNEDNVIHYALDRSVADNVAKAIKEAARKSGVARV
Specific function: In addition to the NAD-dependent oxidative decarboxylation of L-malate, the enzyme catalyzes the decarboxylation of oxaloacetate [H]
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the malic enzymes family [H]
Homologues:
Organism=Homo sapiens, GI4505145, Length=356, Percent_Identity=29.2134831460674, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI270265879, Length=320, Percent_Identity=30, Blast_Score=89, Evalue=8e-18, Organism=Homo sapiens, GI4505143, Length=390, Percent_Identity=24.6153846153846, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI62420882, Length=384, Percent_Identity=24.7395833333333, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI62420880, Length=384, Percent_Identity=24.7395833333333, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI239049447, Length=384, Percent_Identity=24.7395833333333, Blast_Score=82, Evalue=7e-16, Organism=Escherichia coli, GI1788806, Length=403, Percent_Identity=49.1315136476427, Blast_Score=369, Evalue=1e-103, Organism=Escherichia coli, GI87081919, Length=446, Percent_Identity=24.6636771300448, Blast_Score=89, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17537199, Length=440, Percent_Identity=25, Blast_Score=89, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6322823, Length=345, Percent_Identity=27.536231884058, Blast_Score=93, Evalue=7e-20, Organism=Drosophila melanogaster, GI281362672, Length=438, Percent_Identity=25.3424657534247, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI21356279, Length=438, Percent_Identity=25.3424657534247, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI281362674, Length=438, Percent_Identity=25.3424657534247, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI78707242, Length=356, Percent_Identity=26.685393258427, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI78707238, Length=356, Percent_Identity=26.685393258427, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI78707240, Length=356, Percent_Identity=26.685393258427, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI281363503, Length=391, Percent_Identity=27.1099744245524, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI281363505, Length=391, Percent_Identity=27.1099744245524, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI78707236, Length=391, Percent_Identity=27.1099744245524, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI78707232, Length=391, Percent_Identity=27.1099744245524, Blast_Score=89, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR001891 - InterPro: IPR016040 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M [H]
EC number: =1.1.1.38 [H]
Molecular weight: Translated: 41929; Mature: 41929
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00331 MALIC_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYFEESLKLHEDNRGKIEIKSKMEVKTRDDLSLAYTPGVAEPCRKIHENEENVYKYTSK CCHHHHHHHHCCCCCCEEEEECCEEEECCCCCEEEECCCHHHHHHHHHCCCCCEEEEECC GNMVAVVTDGTAVLGLGDIGPKAGLPVMEGKALLFKEFANVDAFPICLDTKDVDEIVKTV CCEEEEEECCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCHHHHHHHH KLIAPGFGGINLEDIGAPRCFEIEEKLKKELDIPVFHDDQHGTAIVVLAGVINALKVVNK HHHCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCEEECCCCCCEEHHHHHHHHHHHHHHH KIEDVKVVVNGAGAAGTAITKLLLSLGVKNLIVCDKIGILYEGIENVDDAKKELSKVTNP HHCEEEEEEECCCCHHHHHHHHHHHHCHHHEEEHHHHHHHHHHHCCHHHHHHHHHHCCCC ENIKGTLADALIGADVFIGVSAPGIVSKDMVKTMNKDSIIFAMANPTPEIMPDLAKEAGA CCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCC KVIGTGRSDFPNQVNNVLAFPGIFKGALDVRAKEINEEMKIAAAYAIASMIKDEDLNEDN EEEECCCCCCCHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VIHYALDRSVADNVAKAIKEAARKSGVARV EEEEEHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNYFEESLKLHEDNRGKIEIKSKMEVKTRDDLSLAYTPGVAEPCRKIHENEENVYKYTSK CCHHHHHHHHCCCCCCEEEEECCEEEECCCCCEEEECCCHHHHHHHHHCCCCCEEEEECC GNMVAVVTDGTAVLGLGDIGPKAGLPVMEGKALLFKEFANVDAFPICLDTKDVDEIVKTV CCEEEEEECCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCHHHHHHHH KLIAPGFGGINLEDIGAPRCFEIEEKLKKELDIPVFHDDQHGTAIVVLAGVINALKVVNK HHHCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCEEECCCCCCEEHHHHHHHHHHHHHHH KIEDVKVVVNGAGAAGTAITKLLLSLGVKNLIVCDKIGILYEGIENVDDAKKELSKVTNP HHCEEEEEEECCCCHHHHHHHHHHHHCHHHEEEHHHHHHHHHHHCCHHHHHHHHHHCCCC ENIKGTLADALIGADVFIGVSAPGIVSKDMVKTMNKDSIIFAMANPTPEIMPDLAKEAGA CCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCC KVIGTGRSDFPNQVNNVLAFPGIFKGALDVRAKEINEEMKIAAAYAIASMIKDEDLNEDN EEEECCCCCCCHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VIHYALDRSVADNVAKAIKEAARKSGVARV EEEEEHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2644282 [H]