| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754440
Identifier: 170754440
GI number: 170754440
Start: 2031458
End: 2031973
Strand: Reverse
Name: 170754440
Synonym: CLD_2723
Alternate gene names: NA
Gene position: 2031973-2031458 (Counterclockwise)
Preceding gene: 170757174
Following gene: 170755457
Centisome position: 51.34
GC content: 24.22
Gene sequence:
>516_bases ATGGCAGAAGATATTTTAAATGAAGAATTTAAATTAAAAAGAAAAAGTTATAAAGAGTTGAGTATTAAACTTGACGAACT AAATAATGAAATAGTATGTGATTTTTTAAAATGTGTACCTGCAAGTTATGTAAATGATCTACAGGTGGCTGTTGATTCAA AGGGTTTAGATGTACATAAAAGTAAATATAAAGAATTTTGTCAGCATTTTAACCATGGGGATATCTCACAAGAAGATATA CATTTATTTGAGATGACGAATGATATATATTCTAATAAGATGCCACAGAGAAATGAAAAAATGATGGAATTTTACAAAAA AGTTCCATTAAGTTTTATAGATAATTTAAAGAAAATAATTGAACGCTATGGAATAGAAAAACATAAAATTCAATTTACAG ATTTTTACAATAAATATCAATCAGATAATTTAGCCGATTATGACGTTCAATTATTTTCACATCTAAAAACAATTTACGAA CATAAAATGCCGAACATAAATAATAATAATAAATAA
Upstream 100 bases:
>100_bases TCGACAATGAATGTATGTTGATATAATATAAATAAGTATATATAATGATGGTATAATTGTAGAAAATTAACAATATTAAT TGTTGTGATGGGGTTTTGGT
Downstream 100 bases:
>100_bases GTAGAAGTTCGGGGGGAATAGTATATGTGTAAATCAATGTATATTAAAAATGATATTAACAATTTATCAGATAATAGTTT TATATATAATTTTGCGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MAEDILNEEFKLKRKSYKELSIKLDELNNEIVCDFLKCVPASYVNDLQVAVDSKGLDVHKSKYKEFCQHFNHGDISQEDI HLFEMTNDIYSNKMPQRNEKMMEFYKKVPLSFIDNLKKIIERYGIEKHKIQFTDFYNKYQSDNLADYDVQLFSHLKTIYE HKMPNINNNNK
Sequences:
>Translated_171_residues MAEDILNEEFKLKRKSYKELSIKLDELNNEIVCDFLKCVPASYVNDLQVAVDSKGLDVHKSKYKEFCQHFNHGDISQEDI HLFEMTNDIYSNKMPQRNEKMMEFYKKVPLSFIDNLKKIIERYGIEKHKIQFTDFYNKYQSDNLADYDVQLFSHLKTIYE HKMPNINNNNK >Mature_170_residues AEDILNEEFKLKRKSYKELSIKLDELNNEIVCDFLKCVPASYVNDLQVAVDSKGLDVHKSKYKEFCQHFNHGDISQEDIH LFEMTNDIYSNKMPQRNEKMMEFYKKVPLSFIDNLKKIIERYGIEKHKIQFTDFYNKYQSDNLADYDVQLFSHLKTIYEH KMPNINNNNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20475; Mature: 20343
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEDILNEEFKLKRKSYKELSIKLDELNNEIVCDFLKCVPASYVNDLQVAVDSKGLDVHK CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH SKYKEFCQHFNHGDISQEDIHLFEMTNDIYSNKMPQRNEKMMEFYKKVPLSFIDNLKKII HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHH ERYGIEKHKIQFTDFYNKYQSDNLADYDVQLFSHLKTIYEHKMPNINNNNK HHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure AEDILNEEFKLKRKSYKELSIKLDELNNEIVCDFLKCVPASYVNDLQVAVDSKGLDVHK CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH SKYKEFCQHFNHGDISQEDIHLFEMTNDIYSNKMPQRNEKMMEFYKKVPLSFIDNLKKII HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHH ERYGIEKHKIQFTDFYNKYQSDNLADYDVQLFSHLKTIYEHKMPNINNNNK HHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA