Click here to switch to the map view.

The map label for this gene is tnpC [H]

Identifier: 170757174

GI number: 170757174

Start: 2032098

End: 2032472

Strand: Reverse

Name: tnpC [H]

Synonym: CLD_2722

Alternate gene names: 170757174

Gene position: 2032472-2032098 (Counterclockwise)

Preceding gene: 170756078

Following gene: 170754440

Centisome position: 51.35

GC content: 26.67

Gene sequence:

>375_bases
ATGGCTGGAAGTACCAAAGGATTAAAAAAATATGCAAAAGAAAAAACTAAATTGACTTTAGAGAAGGTTGATAAAGCTAT
TAGAGAACTCTCCTTTAATGGAGAAAAAATCAATTTTAATAGTGTAGCGACAGCTAGTGGAGTATCTAAAACCTTTCTCT
ACAACAATAAGGAAGTTAAAGAGAGAATTGAAGATTTGAGAAAAAAACAAGTTAATAAAGAAATAAATCAAAGAGCCAAA
TATGATAAAATTTCAAAATCAAAAGATATTATTATAATGGCCAAAGATAAAAAGATTAAAGATTTAGAAGAAGAGAATAA
AAAACTAAAGAAGCAGTTAGAAGTTCTTAGAGGGAAATTGTATGAAATATCTTAA

Upstream 100 bases:

>100_bases
AGAATAAACAATATTTAAATTTGCTAAGAGATACATTAGAAAAAATTAAAGAACATAAATTGGTTCACAAGAATGCAAGT
TCAAGAGAGGAAGTTTTATA

Downstream 100 bases:

>100_bases
ATTATTTTACATATAATCATGTTTTCGACAATGAATGTATGTTGATATAATATAAATAAGTATATATAATGATGGTATAA
TTGTAGAAAATTAACAATAT

Product: transposase C for

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MAGSTKGLKKYAKEKTKLTLEKVDKAIRELSFNGEKINFNSVATASGVSKTFLYNNKEVKERIEDLRKKQVNKEINQRAK
YDKISKSKDIIIMAKDKKIKDLEEENKKLKKQLEVLRGKLYEIS

Sequences:

>Translated_124_residues
MAGSTKGLKKYAKEKTKLTLEKVDKAIRELSFNGEKINFNSVATASGVSKTFLYNNKEVKERIEDLRKKQVNKEINQRAK
YDKISKSKDIIIMAKDKKIKDLEEENKKLKKQLEVLRGKLYEIS
>Mature_123_residues
AGSTKGLKKYAKEKTKLTLEKVDKAIRELSFNGEKINFNSVATASGVSKTFLYNNKEVKERIEDLRKKQVNKEINQRAKY
DKISKSKDIIIMAKDKKIKDLEEENKKLKKQLEVLRGKLYEIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14367; Mature: 14236

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSTKGLKKYAKEKTKLTLEKVDKAIRELSFNGEKINFNSVATASGVSKTFLYNNKEVK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHCCCHHHHHCCCHHHH
ERIEDLRKKQVNKEINQRAKYDKISKSKDIIIMAKDKKIKDLEEENKKLKKQLEVLRGKL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
YEIS
HCCC
>Mature Secondary Structure 
AGSTKGLKKYAKEKTKLTLEKVDKAIRELSFNGEKINFNSVATASGVSKTFLYNNKEVK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHCCCHHHHHCCCHHHH
ERIEDLRKKQVNKEINQRAKYDKISKSKDIIIMAKDKKIKDLEEENKKLKKQLEVLRGKL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
YEIS
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA