| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is yabG [H]
Identifier: 170754325
GI number: 170754325
Start: 151280
End: 152182
Strand: Direct
Name: yabG [H]
Synonym: CLD_0671
Alternate gene names: 170754325
Gene position: 151280-152182 (Clockwise)
Preceding gene: 170755418
Following gene: 170756966
Centisome position: 3.82
GC content: 29.79
Gene sequence:
>903_bases ATGGAAATAGGAGATATAGTTGTAAGAAAATCTTATAAAAAAGACATAACATTTAAAATAATAGATATAAAGCAAGAGCA AGGCAGAGAAATATATACTTTGAAAGGTGTAAATGTAAGAATAATAGCAGATTCTCCATATGAAGATTTAGAAGAAGTAT CAGTAGCTACCATGACTAAGAAGGAAGAGGTTTTTACTAGCAAAGTTAACGACTCTATAAAAAAAATATTAGATGATAGA AAATTTAGAGGGGGGGATAAGGGAAAGCACTTAAATAAAAAAAGTAAGATAGAGAAAATGTATAGAACAAATAAAAATAT AAAAACTAAAGAATTGTATTTTGGGAGACCAGGTAAAATTCTTCATATAGATGGAGACTCAGAATACTTAGATACCTGTC TTAAGGTATACAAGCAATTGCAGTTAGATGTGGTAGGAGAGAAAGTTTTAGAGAAGGAGCAACCCGATAAGATATTAAGC TTAGTTAAGCTATACAAACCTGATATTGTGGTTATAACAGGCCATGATGCCGTATTAAAAGAAACGGAAAATTATACAGA TATAAATAACTATAGAAATTCTAAATATTTTGTTAAAACTGTAGGTGTTTTAAGAGATTATGAAAGAAATTATGATGATT TAATTATATTTGCCGGAGCTTGTCAATCTTGCTATGAAGCTATATTAGATGCAGGAGCTAATTATGCTAGTTCTCCAGGG AGGGTTTTAATACATTGTTTAGATCCAGTATTTTTATGTGAAAAAATAGCATACACAAACATAAGTAATATAGTATCCAT AGAAGATGCCTTAGAAAATACAATAACAGGTATAAAGGGAATTGGTGGATTGCAAACTAGAGGAAAATATAGAGAAGGAT TTCCTAAATCGGAATATGTATAG
Upstream 100 bases:
>100_bases CTTATGTAGTTTTATATGCCTTAAATAGTTTTATTAACAAATTTATTATAAGTATCATAGTATATAGGGTGATTGATTTA TTAAGGTGGAGCTAAATTAT
Downstream 100 bases:
>100_bases AGATTTATAAAATTTTGAATATATATATAAATTTAAGGTAATATTAATAATAATAAGAAATTTTAAAAAAAATCTAAATA TTTATGTGAAAAATAATATT
Product: peptidase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MEIGDIVVRKSYKKDITFKIIDIKQEQGREIYTLKGVNVRIIADSPYEDLEEVSVATMTKKEEVFTSKVNDSIKKILDDR KFRGGDKGKHLNKKSKIEKMYRTNKNIKTKELYFGRPGKILHIDGDSEYLDTCLKVYKQLQLDVVGEKVLEKEQPDKILS LVKLYKPDIVVITGHDAVLKETENYTDINNYRNSKYFVKTVGVLRDYERNYDDLIIFAGACQSCYEAILDAGANYASSPG RVLIHCLDPVFLCEKIAYTNISNIVSIEDALENTITGIKGIGGLQTRGKYREGFPKSEYV
Sequences:
>Translated_300_residues MEIGDIVVRKSYKKDITFKIIDIKQEQGREIYTLKGVNVRIIADSPYEDLEEVSVATMTKKEEVFTSKVNDSIKKILDDR KFRGGDKGKHLNKKSKIEKMYRTNKNIKTKELYFGRPGKILHIDGDSEYLDTCLKVYKQLQLDVVGEKVLEKEQPDKILS LVKLYKPDIVVITGHDAVLKETENYTDINNYRNSKYFVKTVGVLRDYERNYDDLIIFAGACQSCYEAILDAGANYASSPG RVLIHCLDPVFLCEKIAYTNISNIVSIEDALENTITGIKGIGGLQTRGKYREGFPKSEYV >Mature_300_residues MEIGDIVVRKSYKKDITFKIIDIKQEQGREIYTLKGVNVRIIADSPYEDLEEVSVATMTKKEEVFTSKVNDSIKKILDDR KFRGGDKGKHLNKKSKIEKMYRTNKNIKTKELYFGRPGKILHIDGDSEYLDTCLKVYKQLQLDVVGEKVLEKEQPDKILS LVKLYKPDIVVITGHDAVLKETENYTDINNYRNSKYFVKTVGVLRDYERNYDDLIIFAGACQSCYEAILDAGANYASSPG RVLIHCLDPVFLCEKIAYTNISNIVSIEDALENTITGIKGIGGLQTRGKYREGFPKSEYV
Specific function: Cleaves the spore coat proteins spoIVA and safA. May cooperate with tgl to mediate the temperature-dependent cross- linking of coat proteins like gerQ [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Forespore outer membrane. Note=Synthesized in the mother cell compartment and assembled on the surface of the forespore [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase U57 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008764 - ProDom: PD127708 [H]
Pfam domain/function: PF05582 Peptidase_U57 [H]
EC number: NA
Molecular weight: Translated: 34208; Mature: 34208
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIGDIVVRKSYKKDITFKIIDIKQEQGREIYTLKGVNVRIIADSPYEDLEEVSVATMTK CCCCHHHHHHCCCCCCEEEEEEEEHHCCCEEEEEECCEEEEEECCCHHHHHHHHHHHHHH KEEVFTSKVNDSIKKILDDRKFRGGDKGKHLNKKSKIEKMYRTNKNIKTKELYFGRPGKI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCE LHIDGDSEYLDTCLKVYKQLQLDVVGEKVLEKEQPDKILSLVKLYKPDIVVITGHDAVLK EEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCHHHHH ETENYTDINNYRNSKYFVKTVGVLRDYERNYDDLIIFAGACQSCYEAILDAGANYASSPG CCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCC RVLIHCLDPVFLCEKIAYTNISNIVSIEDALENTITGIKGIGGLQTRGKYREGFPKSEYV CEEEEHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCC >Mature Secondary Structure MEIGDIVVRKSYKKDITFKIIDIKQEQGREIYTLKGVNVRIIADSPYEDLEEVSVATMTK CCCCHHHHHHCCCCCCEEEEEEEEHHCCCEEEEEECCEEEEEECCCHHHHHHHHHHHHHH KEEVFTSKVNDSIKKILDDRKFRGGDKGKHLNKKSKIEKMYRTNKNIKTKELYFGRPGKI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCE LHIDGDSEYLDTCLKVYKQLQLDVVGEKVLEKEQPDKILSLVKLYKPDIVVITGHDAVLK EEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCHHHHH ETENYTDINNYRNSKYFVKTVGVLRDYERNYDDLIIFAGACQSCYEAILDAGANYASSPG CCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCC RVLIHCLDPVFLCEKIAYTNISNIVSIEDALENTITGIKGIGGLQTRGKYREGFPKSEYV CEEEEHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]