| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is cotS
Identifier: 170755418
GI number: 170755418
Start: 150152
End: 151156
Strand: Direct
Name: cotS
Synonym: CLD_0672
Alternate gene names: 170755418
Gene position: 150152-151156 (Clockwise)
Preceding gene: 170757561
Following gene: 170754325
Centisome position: 3.79
GC content: 26.37
Gene sequence:
>1005_bases ATGATGAGAGAATTTGAAATTGAAAGACAGTTTAATATTAAAATTGAAAAACTTAAACCTCATAGAGGAGTGTATCATTT AAAAACCAACGAAGGAGATAGATGTTTAAAAAAAATTAATTATGGGGTACAAAAATTATTATTTGTTTCTGGTGCTAAAG AACATCTTATGAAGAATGGCTTTGACTATGTGGACAATTATTTTTTAAATCTAAATGAGGAACCCTATGCACTTGTAAAC GAAGATATATATACTTTGTCAGAATGGATAGAAGGGAGAGAATGCAATTTTAGGGACAAAGAAGATCTTATATTAGCAGC TAGGGCATTAGCTTATCTTCATATAGCATCAAAAGGATATGAACCTCCAGAGAATAGTAAGCTTAAAACAGATTTAGGTA GATGGCCAAACTTAATGAAGAAAAGAGTTAGATCTTTAGATAAGATGAGAGAAATGATAAGAAAGAATAATAATAAAACG GATTTTGATTTAAGTTATATAAAGAACATAGAATTTTACAAGGAGTTAGGTAAGAGATCCATGAAAGTTCTAGAGGATTC AGCTTATATGGAAATATGTAAAAAAACTGAGGAAGAGAAAAGCTTTTGTCATCATGATTATACTTATCATAATATAATAA TAGATAAAAATAATACTATTAATGTTATAGATTTTGATTATTGTAAAAGAGAAATAAAAACCTATGATATTTCTAATTTT ATGATAAAGGTTTTAAAAAGAGTAGATTGGAATATAGAATATGCAGAACTTATATTAAATTCTTATACAGCCATAAATCC ATTAAAAGAGGAAGAGTATAGAACTTTATTTGCATTTTTATTATTCCCACAAAGGTTTTGGAGATTAAGCAACAGATATT ATTACAATGAAGTTACGTGGCCATCAAACACTTTTAATAAGAAGATGGAGGAATTGATTTCTGAAAAAGATAAATATATT AATTTTATTGAAGAATTTAAAAAAATATATTCACAAAAAGAATAA
Upstream 100 bases:
>100_bases TAATTCATCATAATTCATTATATTAATTTAAAGAGAAAAGTGTTAAATTACTTCTAAAACTATAATAATATACATATAGT TTTAATAGAGGTGGTTAACT
Downstream 100 bases:
>100_bases TGAATACATTAAGGCATATGAAGCTTATGTAGTTTTATATGCCTTAAATAGTTTTATTAACAAATTTATTATAAGTATCA TAGTATATAGGGTGATTGAT
Product: spore coat protein CotS
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MMREFEIERQFNIKIEKLKPHRGVYHLKTNEGDRCLKKINYGVQKLLFVSGAKEHLMKNGFDYVDNYFLNLNEEPYALVN EDIYTLSEWIEGRECNFRDKEDLILAARALAYLHIASKGYEPPENSKLKTDLGRWPNLMKKRVRSLDKMREMIRKNNNKT DFDLSYIKNIEFYKELGKRSMKVLEDSAYMEICKKTEEEKSFCHHDYTYHNIIIDKNNTINVIDFDYCKREIKTYDISNF MIKVLKRVDWNIEYAELILNSYTAINPLKEEEYRTLFAFLLFPQRFWRLSNRYYYNEVTWPSNTFNKKMEELISEKDKYI NFIEEFKKIYSQKE
Sequences:
>Translated_334_residues MMREFEIERQFNIKIEKLKPHRGVYHLKTNEGDRCLKKINYGVQKLLFVSGAKEHLMKNGFDYVDNYFLNLNEEPYALVN EDIYTLSEWIEGRECNFRDKEDLILAARALAYLHIASKGYEPPENSKLKTDLGRWPNLMKKRVRSLDKMREMIRKNNNKT DFDLSYIKNIEFYKELGKRSMKVLEDSAYMEICKKTEEEKSFCHHDYTYHNIIIDKNNTINVIDFDYCKREIKTYDISNF MIKVLKRVDWNIEYAELILNSYTAINPLKEEEYRTLFAFLLFPQRFWRLSNRYYYNEVTWPSNTFNKKMEELISEKDKYI NFIEEFKKIYSQKE >Mature_334_residues MMREFEIERQFNIKIEKLKPHRGVYHLKTNEGDRCLKKINYGVQKLLFVSGAKEHLMKNGFDYVDNYFLNLNEEPYALVN EDIYTLSEWIEGRECNFRDKEDLILAARALAYLHIASKGYEPPENSKLKTDLGRWPNLMKKRVRSLDKMREMIRKNNNKT DFDLSYIKNIEFYKELGKRSMKVLEDSAYMEICKKTEEEKSFCHHDYTYHNIIIDKNNTINVIDFDYCKREIKTYDISNF MIKVLKRVDWNIEYAELILNSYTAINPLKEEEYRTLFAFLLFPQRFWRLSNRYYYNEVTWPSNTFNKKMEELISEKDKYI NFIEEFKKIYSQKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Spore wall, spore coat [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CotS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR011009 - InterPro: IPR014255 [H]
Pfam domain/function: PF01636 APH [H]
EC number: NA
Molecular weight: Translated: 40537; Mature: 40537
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMREFEIERQFNIKIEKLKPHRGVYHLKTNEGDRCLKKINYGVQKLLFVSGAKEHLMKNG CCCCCCCCCEECEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCC FDYVDNYFLNLNEEPYALVNEDIYTLSEWIEGRECNFRDKEDLILAARALAYLHIASKGY HHHHCCCEECCCCCCCEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC EPPENSKLKTDLGRWPNLMKKRVRSLDKMREMIRKNNNKTDFDLSYIKNIEFYKELGKRS CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH MKVLEDSAYMEICKKTEEEKSFCHHDYTYHNIIIDKNNTINVIDFDYCKREIKTYDISNF HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEHHHHHHHHHHCCHHHH MIKVLKRVDWNIEYAELILNSYTAINPLKEEEYRTLFAFLLFPQRFWRLSNRYYYNEVTW HHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC PSNTFNKKMEELISEKDKYINFIEEFKKIYSQKE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMREFEIERQFNIKIEKLKPHRGVYHLKTNEGDRCLKKINYGVQKLLFVSGAKEHLMKNG CCCCCCCCCEECEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCC FDYVDNYFLNLNEEPYALVNEDIYTLSEWIEGRECNFRDKEDLILAARALAYLHIASKGY HHHHCCCEECCCCCCCEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC EPPENSKLKTDLGRWPNLMKKRVRSLDKMREMIRKNNNKTDFDLSYIKNIEFYKELGKRS CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH MKVLEDSAYMEICKKTEEEKSFCHHDYTYHNIIIDKNNTINVIDFDYCKREIKTYDISNF HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEHHHHHHHHHHCCHHHH MIKVLKRVDWNIEYAELILNSYTAINPLKEEEYRTLFAFLLFPQRFWRLSNRYYYNEVTW HHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC PSNTFNKKMEELISEKDKYINFIEEFKKIYSQKE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7545510; 9387221; 9384377 [H]