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The map label for this gene is abgA [H]

Identifier: 170754294

GI number: 170754294

Start: 1333473

End: 1334918

Strand: Direct

Name: abgA [H]

Synonym: CLD_3366

Alternate gene names: 170754294

Gene position: 1333473-1334918 (Clockwise)

Preceding gene: 170755291

Following gene: 170755489

Centisome position: 33.69

GC content: 30.01

Gene sequence:

>1446_bases
ATGAAAACCAATTTTCCAGAAAATTTTTTATGGGGTGGTGCAGTTGCAGCTAACCAATGTGAAGGAGCTTATAATATTGA
TGGTAAAGGATTAAGCGTGCAAGATGTAGCGCCAAAGGGAATAAAAGCTGGTCCTACATTAGAGCCTACACAAGATAATA
TGAAACTTATAGGTATAGATTTTTATCATAGATATAAAGAAGATATTAAGCTTTTTGCAGAAATGGGATTTAAGGTTTTT
AGATTATCAATTGCTTGGTCAAGAATATTCCCAATGGGGGATGAAAAAGAAGCAAATGAGAAAGGACTACAATTTTATGA
TGATGTTTTTGATGAATGCTTAAAGTATGACATACAGCCAATAGTAACATTGTCCCATTATGAAACACCATTGCATTTAT
CTAAAGTTTACGATGGATGGAAAAGTCGTGAGATGATTAGATTTTTTAATAAGTATGCTTGTACAGTTTTTAATCGATAT
AAAAATAAAGTAAAATATTGGTTAACTTTTAATGAAATTAATTCAATTACTCATGCACCATTTTTAAGTGGTGGAATCTA
TACACCAATAGAAAAATTAAGTAAGCAAGAGATTTATCAAGCTATTCATCATGAATTAGTAGCAAGTGCAATGGCAGTAA
AAGCATGTCATGAAATTATTCCTGATGCTAAAATAGGATGTATGATTTTGGGGATGCCTGTATATCCATTGAAACCATCA
CCAGAAGATATGTGGGATACTCTTAATAAAGAAAGAGAGAATTTTTTCTTTTCAGATATTCAAGTCCGTGGTTATTATCC
CTCATATTCAAAAAGATTCTTTAAAGAAAATAATATTAAGTTAGATATTACAAATAAAGATATAGAAATATTAAGAAATA
CTGTAGATTTTATTTCATTTAGCTATTATATGAGTATTTGTGAATCTAGCGATAAATCTATTAAGGCAGGTGAGGGAAAT
ATTATTGGAGGGATACCTAATCCTTATTTAAAAGCAAGTGAATGGGGATGGCAAATTGATCCTAAAGGACTAAGGTATTA
TCTTAATATATTGTATGATCGTTATCAAAAGCCATTGTTTATAGTTGAAAATGGATTAGGAGCTGTAGATGAATTAGTTG
AGCTAGAAGATGGAACAAAAACAGTATTAGATGACTATAGAATTTCATATTTAAGAGATCATTTAATTCAAGTATCAGAA
GCAATCGAGGATGGAGTGAACTTAATGGGATATACTTCTTGGGGATGCATTGATCTGGTTAGTTTTACCACTTCTGAATT
AAAAAAACGTTATGGATTTATTTATGTAGATCGTAATGATGATGGAACAGGGACATTAGAACGTTATAAGAAAAAAAGCT
TTTACTGGTATAAAGAAGTAATTTCAAGTAATGGAGATATTGAAGCACTATGCTCAAATATTAATATTGAAAAAGATAAA
ATATAA

Upstream 100 bases:

>100_bases
TTAATAATGATGCTAACCTTTATGGAGCTTTGTATAATCTACTATTAGATGAAGAAACTATTGATATAATAAAAAATAAT
GAAAATATGGGGGATTAATT

Downstream 100 bases:

>100_bases
ATAGGTTAAATATATAGCAGCTTTAATAGGAATTTGATGAAATAAATAGTGTAATAGTTTTATAAACTATTACATTATTT
ATTTTATAGAAAAAGGTGTT

Product: glycosy hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MKTNFPENFLWGGAVAANQCEGAYNIDGKGLSVQDVAPKGIKAGPTLEPTQDNMKLIGIDFYHRYKEDIKLFAEMGFKVF
RLSIAWSRIFPMGDEKEANEKGLQFYDDVFDECLKYDIQPIVTLSHYETPLHLSKVYDGWKSREMIRFFNKYACTVFNRY
KNKVKYWLTFNEINSITHAPFLSGGIYTPIEKLSKQEIYQAIHHELVASAMAVKACHEIIPDAKIGCMILGMPVYPLKPS
PEDMWDTLNKERENFFFSDIQVRGYYPSYSKRFFKENNIKLDITNKDIEILRNTVDFISFSYYMSICESSDKSIKAGEGN
IIGGIPNPYLKASEWGWQIDPKGLRYYLNILYDRYQKPLFIVENGLGAVDELVELEDGTKTVLDDYRISYLRDHLIQVSE
AIEDGVNLMGYTSWGCIDLVSFTTSELKKRYGFIYVDRNDDGTGTLERYKKKSFYWYKEVISSNGDIEALCSNINIEKDK
I

Sequences:

>Translated_481_residues
MKTNFPENFLWGGAVAANQCEGAYNIDGKGLSVQDVAPKGIKAGPTLEPTQDNMKLIGIDFYHRYKEDIKLFAEMGFKVF
RLSIAWSRIFPMGDEKEANEKGLQFYDDVFDECLKYDIQPIVTLSHYETPLHLSKVYDGWKSREMIRFFNKYACTVFNRY
KNKVKYWLTFNEINSITHAPFLSGGIYTPIEKLSKQEIYQAIHHELVASAMAVKACHEIIPDAKIGCMILGMPVYPLKPS
PEDMWDTLNKERENFFFSDIQVRGYYPSYSKRFFKENNIKLDITNKDIEILRNTVDFISFSYYMSICESSDKSIKAGEGN
IIGGIPNPYLKASEWGWQIDPKGLRYYLNILYDRYQKPLFIVENGLGAVDELVELEDGTKTVLDDYRISYLRDHLIQVSE
AIEDGVNLMGYTSWGCIDLVSFTTSELKKRYGFIYVDRNDDGTGTLERYKKKSFYWYKEVISSNGDIEALCSNINIEKDK
I
>Mature_481_residues
MKTNFPENFLWGGAVAANQCEGAYNIDGKGLSVQDVAPKGIKAGPTLEPTQDNMKLIGIDFYHRYKEDIKLFAEMGFKVF
RLSIAWSRIFPMGDEKEANEKGLQFYDDVFDECLKYDIQPIVTLSHYETPLHLSKVYDGWKSREMIRFFNKYACTVFNRY
KNKVKYWLTFNEINSITHAPFLSGGIYTPIEKLSKQEIYQAIHHELVASAMAVKACHEIIPDAKIGCMILGMPVYPLKPS
PEDMWDTLNKERENFFFSDIQVRGYYPSYSKRFFKENNIKLDITNKDIEILRNTVDFISFSYYMSICESSDKSIKAGEGN
IIGGIPNPYLKASEWGWQIDPKGLRYYLNILYDRYQKPLFIVENGLGAVDELVELEDGTKTVLDDYRISYLRDHLIQVSE
AIEDGVNLMGYTSWGCIDLVSFTTSELKKRYGFIYVDRNDDGTGTLERYKKKSFYWYKEVISSNGDIEALCSNINIEKDK
I

Specific function: Can Hydrolyze Salicin And Arbutin. [C]

COG id: COG2723

COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 1 family [H]

Homologues:

Organism=Homo sapiens, GI110681710, Length=489, Percent_Identity=29.4478527607362, Blast_Score=189, Evalue=4e-48,
Organism=Homo sapiens, GI32481206, Length=483, Percent_Identity=27.9503105590062, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI13273313, Length=483, Percent_Identity=27.9503105590062, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI28376633, Length=478, Percent_Identity=27.6150627615063, Blast_Score=155, Evalue=9e-38,
Organism=Homo sapiens, GI24497614, Length=485, Percent_Identity=25.7731958762887, Blast_Score=137, Evalue=3e-32,
Organism=Escherichia coli, GI2367270, Length=465, Percent_Identity=59.1397849462366, Blast_Score=567, Evalue=1e-163,
Organism=Escherichia coli, GI1789070, Length=481, Percent_Identity=52.3908523908524, Blast_Score=526, Evalue=1e-150,
Organism=Escherichia coli, GI2367174, Length=478, Percent_Identity=51.673640167364, Blast_Score=492, Evalue=1e-140,
Organism=Caenorhabditis elegans, GI17552856, Length=491, Percent_Identity=28.5132382892057, Blast_Score=169, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI17539390, Length=442, Percent_Identity=28.5067873303167, Blast_Score=154, Evalue=8e-38,
Organism=Drosophila melanogaster, GI21356577, Length=471, Percent_Identity=26.7515923566879, Blast_Score=147, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001360
- InterPro:   IPR018120
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00232 Glyco_hydro_1 [H]

EC number: =3.2.1.86 [H]

Molecular weight: Translated: 55559; Mature: 55559

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1 ; PS00653 GLYCOSYL_HYDROL_F1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNFPENFLWGGAVAANQCEGAYNIDGKGLSVQDVAPKGIKAGPTLEPTQDNMKLIGID
CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEH
FYHRYKEDIKLFAEMGFKVFRLSIAWSRIFPMGDEKEANEKGLQFYDDVFDECLKYDIQP
HHHHHHHHHHHHHHCCCEEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
IVTLSHYETPLHLSKVYDGWKSREMIRFFNKYACTVFNRYKNKVKYWLTFNEINSITHAP
EEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHCCCCCCC
FLSGGIYTPIEKLSKQEIYQAIHHELVASAMAVKACHEIIPDAKIGCMILGMPVYPLKPS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCC
PEDMWDTLNKERENFFFSDIQVRGYYPSYSKRFFKENNIKLDITNKDIEILRNTVDFISF
HHHHHHHHHHHHHCEEEEEEEEEECCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHH
SYYMSICESSDKSIKAGEGNIIGGIPNPYLKASEWGWQIDPKGLRYYLNILYDRYQKPLF
HHHHHHHHCCCCCEECCCCCEECCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHCCCEE
IVENGLGAVDELVELEDGTKTVLDDYRISYLRDHLIQVSEAIEDGVNLMGYTSWGCIDLV
EEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHH
SFTTSELKKRYGFIYVDRNDDGTGTLERYKKKSFYWYKEVISSNGDIEALCSNINIEKDK
HHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC
I
C
>Mature Secondary Structure
MKTNFPENFLWGGAVAANQCEGAYNIDGKGLSVQDVAPKGIKAGPTLEPTQDNMKLIGID
CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEH
FYHRYKEDIKLFAEMGFKVFRLSIAWSRIFPMGDEKEANEKGLQFYDDVFDECLKYDIQP
HHHHHHHHHHHHHHCCCEEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
IVTLSHYETPLHLSKVYDGWKSREMIRFFNKYACTVFNRYKNKVKYWLTFNEINSITHAP
EEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHCCCCCCC
FLSGGIYTPIEKLSKQEIYQAIHHELVASAMAVKACHEIIPDAKIGCMILGMPVYPLKPS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCC
PEDMWDTLNKERENFFFSDIQVRGYYPSYSKRFFKENNIKLDITNKDIEILRNTVDFISF
HHHHHHHHHHHHHCEEEEEEEEEECCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHH
SYYMSICESSDKSIKAGEGNIIGGIPNPYLKASEWGWQIDPKGLRYYLNILYDRYQKPLF
HHHHHHHHCCCCCEECCCCCEECCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHCCCEE
IVENGLGAVDELVELEDGTKTVLDDYRISYLRDHLIQVSEAIEDGVNLMGYTSWGCIDLV
EEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHH
SFTTSELKKRYGFIYVDRNDDGTGTLERYKKKSFYWYKEVISSNGDIEALCSNINIEKDK
HHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC
I
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA