| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754252
Identifier: 170754252
GI number: 170754252
Start: 1593195
End: 1593758
Strand: Direct
Name: 170754252
Synonym: CLD_3115
Alternate gene names: NA
Gene position: 1593195-1593758 (Clockwise)
Preceding gene: 170755789
Following gene: 170755815
Centisome position: 40.25
GC content: 25.0
Gene sequence:
>564_bases ATGCAAAAGTTGTTTTGTAATATTTGTGGTATAGAAATAAATGAAAGAAATTATAATTTAAATAAGGAAGCTTTTTCAGA TAAAAATACTACTGATTCTATAAAATTTTGTCCTATATGTGGAGCACCCATAAAATATTTAAGTAAGGAAAGGTTTATAT ATAAGTTAGAAGATAAAGAATTAAATAAAGAAGTGGTTAAAATATTAGACCATGCTGTAAAATTAGAAGTATTCAATGGA GATTTTTATAAAAAGGCTTCAGAATTAGCTAAGAATGAAAAGATATCAAAATTATTTAAGGCCTTAGCGAATATTGAATA TGGTCATGCTATGGTTCACAAAAATTTAGCGGGAATAAGAGAAATGCCTAAACTTGCTGCAATAAATTATGATAAATATG ATACTGACAGTATACTATTAGAAATGGCTGAAAAAAGAGAAGAACATGCTGTTAATTATTATAACAAATATGGTAAAGAT ATTAATTCGAAGTCATTAAATATAGTTTTTGAAGCTTTGAAAAATGTGGAGATAGATCATATACATATAATAAATGAAAA ATAG
Upstream 100 bases:
>100_bases GTTATATTATATAATAAAGTTGGGAGTTTATTCTAGGTGTATAATCCCTAATAGTTTTATGACATATTGTATAGAACAAT TAATCACAGGAGGGGAAGTT
Downstream 100 bases:
>100_bases AACTTAGATTTAACTAAGTTCTATTTTTTAACCCTTTGTACTTTTTTAACCTTTTGAATATTACCTTCCATAGGGATTAA ATCCTTCTTTGTAGTCATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MQKLFCNICGIEINERNYNLNKEAFSDKNTTDSIKFCPICGAPIKYLSKERFIYKLEDKELNKEVVKILDHAVKLEVFNG DFYKKASELAKNEKISKLFKALANIEYGHAMVHKNLAGIREMPKLAAINYDKYDTDSILLEMAEKREEHAVNYYNKYGKD INSKSLNIVFEALKNVEIDHIHIINEK
Sequences:
>Translated_187_residues MQKLFCNICGIEINERNYNLNKEAFSDKNTTDSIKFCPICGAPIKYLSKERFIYKLEDKELNKEVVKILDHAVKLEVFNG DFYKKASELAKNEKISKLFKALANIEYGHAMVHKNLAGIREMPKLAAINYDKYDTDSILLEMAEKREEHAVNYYNKYGKD INSKSLNIVFEALKNVEIDHIHIINEK >Mature_187_residues MQKLFCNICGIEINERNYNLNKEAFSDKNTTDSIKFCPICGAPIKYLSKERFIYKLEDKELNKEVVKILDHAVKLEVFNG DFYKKASELAKNEKISKLFKALANIEYGHAMVHKNLAGIREMPKLAAINYDKYDTDSILLEMAEKREEHAVNYYNKYGKD INSKSLNIVFEALKNVEIDHIHIINEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21713; Mature: 21713
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKLFCNICGIEINERNYNLNKEAFSDKNTTDSIKFCPICGAPIKYLSKERFIYKLEDKE CCCCEEEECCEEECCCCCCCCHHHCCCCCCCCCEEECCCCCCHHHHHCCCCEEEEECCHH LNKEVVKILDHAVKLEVFNGDFYKKASELAKNEKISKLFKALANIEYGHAMVHKNLAGIR HHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH EMPKLAAINYDKYDTDSILLEMAEKREEHAVNYYNKYGKDINSKSLNIVFEALKNVEIDH HCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEE IHIINEK EEEECCC >Mature Secondary Structure MQKLFCNICGIEINERNYNLNKEAFSDKNTTDSIKFCPICGAPIKYLSKERFIYKLEDKE CCCCEEEECCEEECCCCCCCCHHHCCCCCCCCCEEECCCCCCHHHHHCCCCEEEEECCHH LNKEVVKILDHAVKLEVFNGDFYKKASELAKNEKISKLFKALANIEYGHAMVHKNLAGIR HHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH EMPKLAAINYDKYDTDSILLEMAEKREEHAVNYYNKYGKDINSKSLNIVFEALKNVEIDH HCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEE IHIINEK EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA