| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yyaJ [H]
Identifier: 170751864
GI number: 170751864
Start: 5809449
End: 5810921
Strand: Reverse
Name: yyaJ [H]
Synonym: Mrad2831_5496
Alternate gene names: 170751864
Gene position: 5810921-5809449 (Counterclockwise)
Preceding gene: 170751867
Following gene: 170751860
Centisome position: 95.61
GC content: 69.11
Gene sequence:
>1473_bases ATGGCGAGCAAGGTCGAGGGGGGATCCGGGACGCCGGAACGCGCGGAGATCGGCCGCGTGATCGACACCGACATCTCCGC GCGCCTGGACCGGCTGCCCTGGGGCCGCTTCCACGTACTGGTGATCGTGGCGCTCGGCATCACCTGGGTGCTGGACGGCC TCGAAGTGACGCTCGCCGGCTCCCTGGTGGGCGCGCTGCGCCAGCCGCCCATGTCGTTCTCGGAGTTCGACGTCGGGCTC GCCGCCTCCTGCTACCTCGTGGGCGCCGTCACCGGCGCGATCGGCTTCGGCTGGCTCACCGACCGGATCGGCCGCAAGAA GCTGTTCTTCATCACGCTCGCCCTCTACCTCGTCGCCACGGCCGCCACCGGCCTGTCGTGGAACATCTGGACCTTCTGCT TCTTCCGCTTCCTCACGGGCGCGGGGATCGGCGGCGAGTACACGGCGATCAACTCGACCATCCAGGAGCTGGTCCCGGCC CGGGTCCGCGGGTGGACCAACCTCGTCATCAACGGCTCGTTCTGGATCGGCGCGGCGCTCGGCTCGTTCATGTCGATCGT GCTCCTCAAGCCCGAGGTGATCGACCCAGCCTGGGGCTGGCGCGTCGCCTTCTTCACCGGCGGCGCCATCGGCCTCGTGA TCCTCCTCCTGCGCACCTGGATCCCCGAGAGCCCGCGCTGGCTCGCCACCCACGGCTACGCGGCGGAAGCCGACCGGGTC GTCACCGGCATCGAGAAGCGCTTCACCGACGAGGGCGTCACCCTGCCGCCGGTGGACGAGAGCAAGCGCATGAAGGTCCG CACCCGCGACCACACACCGCTCTCCGAGGTGTTCAAGGCGCTGTTCGTGACGAGCCGCAAGGAGACCATGGTCGGTCTCG CACTGATGATCGCGCAGGCCTTCTTCTACAACGCCCTGTTCTTCACATACGCGCTGGTGCTGGAGCGCTTTTACCAGGTC CCCGGCAACCATGTCGGCTGGTACCTGCTGCCCTTCGCGCTCGGCTCGTTCCTCGGCCCGCTGCTCCTCGGGCGGCTCTT CGACACGATCGGACGGCGCAAGATGATCGCCTTCACGTACGGCATCTCGGCGCTGCTGCTCGCCGGTGTCGGCCTGCTGT TCCGCCTCGACGTGCTCGGGCCGGTCGGCCAGACCGCGGCCTGGATGGTGGTGTTCTTCTTCGCCTCGGCGGCGGCGAGC TCGGCCTATCTCACGGTCTCGGAGACCTTCCCGCTGGAGATCCGGGCCCTGGCGATCGCGGCCTTCTACGCGGTCGGCAC CGGTATCGGCGGCGTCTCGGGCCCGCTCCTGTTCGGCACGCTGGTCGAGACCGGCTCGCGCGACTGGGTGCTGTTCGGCT ACGGCCTCGGCGCTGTGCTGATGCTCATCGCGGCGGTGGTCGGAGGCATCTGGGGAACGGCCGCGGAGGGCAAGTCCCTG GAGGAGGTGTCGAAGCCGCTGGCAGCGGCCTGA
Upstream 100 bases:
>100_bases CCGAATCGATTTCCAACCCGTTCCCAACACCTGCCTACAGTCGCGGTAAATGCCGGCTGTCTCAGCAGGGTAAACACTTG GACCGGGAGGATACGCGGAC
Downstream 100 bases:
>100_bases GGGCAGGCCCGCGGCGACAGCCGTCCGCGCGGGCGGAGCGAGGCCGCCGGGCCTCGCGCCGCACAGCGCTCGCCGTCGCG GTCCGTCACGTTTCCCTGCG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 490; Mature: 489
Protein sequence:
>490_residues MASKVEGGSGTPERAEIGRVIDTDISARLDRLPWGRFHVLVIVALGITWVLDGLEVTLAGSLVGALRQPPMSFSEFDVGL AASCYLVGAVTGAIGFGWLTDRIGRKKLFFITLALYLVATAATGLSWNIWTFCFFRFLTGAGIGGEYTAINSTIQELVPA RVRGWTNLVINGSFWIGAALGSFMSIVLLKPEVIDPAWGWRVAFFTGGAIGLVILLLRTWIPESPRWLATHGYAAEADRV VTGIEKRFTDEGVTLPPVDESKRMKVRTRDHTPLSEVFKALFVTSRKETMVGLALMIAQAFFYNALFFTYALVLERFYQV PGNHVGWYLLPFALGSFLGPLLLGRLFDTIGRRKMIAFTYGISALLLAGVGLLFRLDVLGPVGQTAAWMVVFFFASAAAS SAYLTVSETFPLEIRALAIAAFYAVGTGIGGVSGPLLFGTLVETGSRDWVLFGYGLGAVLMLIAAVVGGIWGTAAEGKSL EEVSKPLAAA
Sequences:
>Translated_490_residues MASKVEGGSGTPERAEIGRVIDTDISARLDRLPWGRFHVLVIVALGITWVLDGLEVTLAGSLVGALRQPPMSFSEFDVGL AASCYLVGAVTGAIGFGWLTDRIGRKKLFFITLALYLVATAATGLSWNIWTFCFFRFLTGAGIGGEYTAINSTIQELVPA RVRGWTNLVINGSFWIGAALGSFMSIVLLKPEVIDPAWGWRVAFFTGGAIGLVILLLRTWIPESPRWLATHGYAAEADRV VTGIEKRFTDEGVTLPPVDESKRMKVRTRDHTPLSEVFKALFVTSRKETMVGLALMIAQAFFYNALFFTYALVLERFYQV PGNHVGWYLLPFALGSFLGPLLLGRLFDTIGRRKMIAFTYGISALLLAGVGLLFRLDVLGPVGQTAAWMVVFFFASAAAS SAYLTVSETFPLEIRALAIAAFYAVGTGIGGVSGPLLFGTLVETGSRDWVLFGYGLGAVLMLIAAVVGGIWGTAAEGKSL EEVSKPLAAA >Mature_489_residues ASKVEGGSGTPERAEIGRVIDTDISARLDRLPWGRFHVLVIVALGITWVLDGLEVTLAGSLVGALRQPPMSFSEFDVGLA ASCYLVGAVTGAIGFGWLTDRIGRKKLFFITLALYLVATAATGLSWNIWTFCFFRFLTGAGIGGEYTAINSTIQELVPAR VRGWTNLVINGSFWIGAALGSFMSIVLLKPEVIDPAWGWRVAFFTGGAIGLVILLLRTWIPESPRWLATHGYAAEADRVV TGIEKRFTDEGVTLPPVDESKRMKVRTRDHTPLSEVFKALFVTSRKETMVGLALMIAQAFFYNALFFTYALVLERFYQVP GNHVGWYLLPFALGSFLGPLLLGRLFDTIGRRKMIAFTYGISALLLAGVGLLFRLDVLGPVGQTAAWMVVFFFASAAASS AYLTVSETFPLEIRALAIAAFYAVGTGIGGVSGPLLFGTLVETGSRDWVLFGYGLGAVLMLIAAVVGGIWGTAAEGKSLE EVSKPLAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI213021148, Length=267, Percent_Identity=24.7191011235955, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI166197673, Length=196, Percent_Identity=30.1020408163265, Blast_Score=68, Evalue=3e-11, Organism=Homo sapiens, GI4506999, Length=401, Percent_Identity=24.4389027431421, Blast_Score=67, Evalue=5e-11, Organism=Homo sapiens, GI24308167, Length=513, Percent_Identity=21.6374269005848, Blast_Score=66, Evalue=6e-11, Organism=Homo sapiens, GI23510410, Length=236, Percent_Identity=26.271186440678, Blast_Score=66, Evalue=9e-11, Organism=Escherichia coli, GI1788068, Length=485, Percent_Identity=27.4226804123711, Blast_Score=96, Evalue=7e-21, Organism=Escherichia coli, GI87082159, Length=443, Percent_Identity=25.5079006772009, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1786229, Length=424, Percent_Identity=25.9433962264151, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1788074, Length=455, Percent_Identity=25.9340659340659, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1790550, Length=420, Percent_Identity=24.7619047619048, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI87081723, Length=382, Percent_Identity=24.6073298429319, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI1789312, Length=348, Percent_Identity=25, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI32564663, Length=488, Percent_Identity=23.155737704918, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17565976, Length=306, Percent_Identity=24.1830065359477, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71986689, Length=270, Percent_Identity=23.7037037037037, Blast_Score=66, Evalue=4e-11, Organism=Caenorhabditis elegans, GI193202825, Length=270, Percent_Identity=23.7037037037037, Blast_Score=66, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6320766, Length=366, Percent_Identity=24.0437158469945, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324400, Length=364, Percent_Identity=23.9010989010989, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6320552, Length=375, Percent_Identity=24, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI221330907, Length=367, Percent_Identity=24.2506811989101, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI19922874, Length=453, Percent_Identity=23.3995584988962, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI19922616, Length=363, Percent_Identity=23.1404958677686, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI24648211, Length=382, Percent_Identity=21.9895287958115, Blast_Score=66, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 52793; Mature: 52662
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASKVEGGSGTPERAEIGRVIDTDISARLDRLPWGRFHVLVIVALGITWVLDGLEVTLAG CCCCCCCCCCCCCHHHHCCHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH SLVGALRQPPMSFSEFDVGLAASCYLVGAVTGAIGFGWLTDRIGRKKLFFITLALYLVAT HHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AATGLSWNIWTFCFFRFLTGAGIGGEYTAINSTIQELVPARVRGWTNLVINGSFWIGAAL HHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHH GSFMSIVLLKPEVIDPAWGWRVAFFTGGAIGLVILLLRTWIPESPRWLATHGYAAEADRV HHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHH VTGIEKRFTDEGVTLPPVDESKRMKVRTRDHTPLSEVFKALFVTSRKETMVGLALMIAQA HHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH FFYNALFFTYALVLERFYQVPGNHVGWYLLPFALGSFLGPLLLGRLFDTIGRRKMIAFTY HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHH GISALLLAGVGLLFRLDVLGPVGQTAAWMVVFFFASAAASSAYLTVSETFPLEIRALAIA HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH AFYAVGTGIGGVSGPLLFGTLVETGSRDWVLFGYGLGAVLMLIAAVVGGIWGTAAEGKSL HHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCH EEVSKPLAAA HHHHHHHCCC >Mature Secondary Structure ASKVEGGSGTPERAEIGRVIDTDISARLDRLPWGRFHVLVIVALGITWVLDGLEVTLAG CCCCCCCCCCCCHHHHCCHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH SLVGALRQPPMSFSEFDVGLAASCYLVGAVTGAIGFGWLTDRIGRKKLFFITLALYLVAT HHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AATGLSWNIWTFCFFRFLTGAGIGGEYTAINSTIQELVPARVRGWTNLVINGSFWIGAAL HHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHH GSFMSIVLLKPEVIDPAWGWRVAFFTGGAIGLVILLLRTWIPESPRWLATHGYAAEADRV HHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHH VTGIEKRFTDEGVTLPPVDESKRMKVRTRDHTPLSEVFKALFVTSRKETMVGLALMIAQA HHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH FFYNALFFTYALVLERFYQVPGNHVGWYLLPFALGSFLGPLLLGRLFDTIGRRKMIAFTY HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHH GISALLLAGVGLLFRLDVLGPVGQTAAWMVVFFFASAAASSAYLTVSETFPLEIRALAIA HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH AFYAVGTGIGGVSGPLLFGTLVETGSRDWVLFGYGLGAVLMLIAAVVGGIWGTAAEGKSL HHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCH EEVSKPLAAA HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7584024; 8011666; 9384377 [H]