Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is 170751302

Identifier: 170751302

GI number: 170751302

Start: 5240054

End: 5242063

Strand: Direct

Name: 170751302

Synonym: Mrad2831_4919

Alternate gene names: NA

Gene position: 5240054-5242063 (Clockwise)

Preceding gene: 170751299

Following gene: 170751303

Centisome position: 86.22

GC content: 73.03

Gene sequence:

>2010_bases
ATGGACGCCCGCAGCCCGACGATCACGCCGAAGACGCAGGACCGTCAGGCCGAGCTGACCCTGCGGGGGATCGCGCTCGG
CGCGGCCATCACCGTCGTGTTCATGGCCGCCAACCTCTACATGGGCCTGAAGACCGGGATGACGTTCTCGTCCTCGATCC
CGGCCGCGATGATCTCGATGGGCGCCTTCCGGCTTATGGGCGGCGCCGGCATCCTCGAGAACAACATCGTGCAGACCCAG
GCCTCGGCGGCCGGCACCCTGTGCAACGTCATCCTGGCTCTCCCCGGCCTCGTCCTCGTCGGCCACTGGCACGGCTTCCC
GTTCTGGCAGACCACGGCGGTCTGCCTGCTGGGCGGTCTGCTCGGCGTCGCCTTCTCGATCCCGCTCCGCCGCGCCCTCG
TGTCGGGCAGCGATCTCCCCTATCCCGAGGGCATCGCCGCCGCGGAGGTTCTCAAGACCGGGCACGAGGAGCAGGGCGGC
CGCGGCCTGCGCGACCTGCTCGGGGCCGCCGCGGCCGCCGGGACGATCGGGCTCGCCACCACGGGGCTGAAGGTCCTGGG
CGAGGGCCTCAACGGCGCGGTCAGCCTCGGCGGCGCGGTGTTCCGCACCGGGACCGGCTTCTCGCTGGCGCTGGTCGGCG
TCGGCTACCTCGTGGGCATCGGCGCCTGCCTCGCGCTGCTGACCGGCGTCCTGATCGCCTGGGGGATCGCGGTCCCGATC
CTGACCGCCCTGTCGCCCGACCCCGGCAAGTCCGCGGGTGCGGCCGCCGAGGCGGTCTGGTCCGGGCAGGTGCGCCTCAT
GGGCGCCGGCATCATCGCGGTGGGCGGGCTCTGGACCGTGGGCTCGCTGGCGCGCCCGATCTTCGGAAGCATCCGCGCCG
CCCTGTCCGGGAGCGGCGGTCTCGGCAAGGATCATCCGCGCGAGGAGCGCGACCTGCCGATCACCTGGGTCGCCGCCGCG
ACGCTGGCCCTGTGCGTGCCGCTCGCGATCCTGTTCGCGTACTTCGCCGCGCCGGCCGACCTCGGCGGCCTGATGATCGT
GCTGGCGGTGGCCGCGACCCTGTTCACGGTGCTGTTCGGCTTCCTGATGGCGGCGGCCTGCGGCTACCTCGCGGGCCTGC
TGGGCTCCTCGTCCAGCCCGATCTCGGGGATCGGCATCCTGACCACGATGGCGACCGCGCTGCTCCTGCCCCTGATCCTG
GGGCATTCCGCGGGGCCCGAGGGGGACCGGTTCGTGACCGGCATGGCGCTGCTGCTGACGTCCGTGATCATCACCACCTC
GTCGATCGCCAACGACAACCTGCAGGACCTGAAGACCGGGCAGGTGCTGGGCGCCACGCCCTGGCACCAGCAGGTCGCGC
TCATCCTCGGCGTCGGGGTCGGCGCCGTGGTGATCGCCCCGCTCCTGTCGCTGCTCTACGAGGCCTACGGCTTCGTCGGC
GCGCCCGCGCATGACGGGCAGGACGCGGGGAGCGCCATGCCGGCGCCCCAGGCGGCCCTGATGACCCAGATCGCCAACGG
CATCACGCACGGCGAGCTGCCCTGGACCATGGTGCTGATCGGGGCCGGGCTCGGGGTGGTGCTGGTGGCGGCCGAGACCT
GGCTGAAGCGGCGCGACCTCACCTTCCCGGCCCTGACGGTCGGGATCGGCATGTACCTGCCGCTGTCGGTGGAGATGACG
ATCGCGATCGGCGGCGTCCTCGGCTGGATCGCCGAGCGCCGGCTGCGCGCCCGCGTCGGACCGAAGGGGGACGCGAAGGC
CGACAAGGCAGTGGGGTACGCCCGCCGGCGGGGGGTGCTCCTCGCCTCCGGATTCCTCGTCGGCGAGAGCTGCATCGGCG
TGCTGCTCGCCGGCACCGATCTCCTGGCTGGGCACAGTTCGGCGATCGCCGTCGCCGGCAAGGGCTTCGCGCCCTACGCC
ACGGGGCTCGGCCTCGCCGTGTTCCTGGCGGGCCTCGCCGTCTACCTGCGGATGGTCTCGACGCCGGCCGCGGCCCAGCG
GGGGGCGTGA

Upstream 100 bases:

>100_bases
ACAGATCGCCCCAGGGACCGGGCGAGGCCGCCCGGCCGGCGACGGCGCGGGAACGTTTCCGGCCCCTCGCGTGCTGTGCC
TTCCGCAGCCCGAGTGGATG

Downstream 100 bases:

>100_bases
CGGATCCGCCGGGTTCCGGAGCGGGTTCCCCCAGGACGCCGTCGTCCGCGCGGGCGGAGCGAAGCCGCCCGGACGACACG
ACGCTCACGGATGCCGCGTG

Product: OPT family oligopeptide transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 669; Mature: 669

Protein sequence:

>669_residues
MDARSPTITPKTQDRQAELTLRGIALGAAITVVFMAANLYMGLKTGMTFSSSIPAAMISMGAFRLMGGAGILENNIVQTQ
ASAAGTLCNVILALPGLVLVGHWHGFPFWQTTAVCLLGGLLGVAFSIPLRRALVSGSDLPYPEGIAAAEVLKTGHEEQGG
RGLRDLLGAAAAAGTIGLATTGLKVLGEGLNGAVSLGGAVFRTGTGFSLALVGVGYLVGIGACLALLTGVLIAWGIAVPI
LTALSPDPGKSAGAAAEAVWSGQVRLMGAGIIAVGGLWTVGSLARPIFGSIRAALSGSGGLGKDHPREERDLPITWVAAA
TLALCVPLAILFAYFAAPADLGGLMIVLAVAATLFTVLFGFLMAAACGYLAGLLGSSSSPISGIGILTTMATALLLPLIL
GHSAGPEGDRFVTGMALLLTSVIITTSSIANDNLQDLKTGQVLGATPWHQQVALILGVGVGAVVIAPLLSLLYEAYGFVG
APAHDGQDAGSAMPAPQAALMTQIANGITHGELPWTMVLIGAGLGVVLVAAETWLKRRDLTFPALTVGIGMYLPLSVEMT
IAIGGVLGWIAERRLRARVGPKGDAKADKAVGYARRRGVLLASGFLVGESCIGVLLAGTDLLAGHSSAIAVAGKGFAPYA
TGLGLAVFLAGLAVYLRMVSTPAAAQRGA

Sequences:

>Translated_669_residues
MDARSPTITPKTQDRQAELTLRGIALGAAITVVFMAANLYMGLKTGMTFSSSIPAAMISMGAFRLMGGAGILENNIVQTQ
ASAAGTLCNVILALPGLVLVGHWHGFPFWQTTAVCLLGGLLGVAFSIPLRRALVSGSDLPYPEGIAAAEVLKTGHEEQGG
RGLRDLLGAAAAAGTIGLATTGLKVLGEGLNGAVSLGGAVFRTGTGFSLALVGVGYLVGIGACLALLTGVLIAWGIAVPI
LTALSPDPGKSAGAAAEAVWSGQVRLMGAGIIAVGGLWTVGSLARPIFGSIRAALSGSGGLGKDHPREERDLPITWVAAA
TLALCVPLAILFAYFAAPADLGGLMIVLAVAATLFTVLFGFLMAAACGYLAGLLGSSSSPISGIGILTTMATALLLPLIL
GHSAGPEGDRFVTGMALLLTSVIITTSSIANDNLQDLKTGQVLGATPWHQQVALILGVGVGAVVIAPLLSLLYEAYGFVG
APAHDGQDAGSAMPAPQAALMTQIANGITHGELPWTMVLIGAGLGVVLVAAETWLKRRDLTFPALTVGIGMYLPLSVEMT
IAIGGVLGWIAERRLRARVGPKGDAKADKAVGYARRRGVLLASGFLVGESCIGVLLAGTDLLAGHSSAIAVAGKGFAPYA
TGLGLAVFLAGLAVYLRMVSTPAAAQRGA
>Mature_669_residues
MDARSPTITPKTQDRQAELTLRGIALGAAITVVFMAANLYMGLKTGMTFSSSIPAAMISMGAFRLMGGAGILENNIVQTQ
ASAAGTLCNVILALPGLVLVGHWHGFPFWQTTAVCLLGGLLGVAFSIPLRRALVSGSDLPYPEGIAAAEVLKTGHEEQGG
RGLRDLLGAAAAAGTIGLATTGLKVLGEGLNGAVSLGGAVFRTGTGFSLALVGVGYLVGIGACLALLTGVLIAWGIAVPI
LTALSPDPGKSAGAAAEAVWSGQVRLMGAGIIAVGGLWTVGSLARPIFGSIRAALSGSGGLGKDHPREERDLPITWVAAA
TLALCVPLAILFAYFAAPADLGGLMIVLAVAATLFTVLFGFLMAAACGYLAGLLGSSSSPISGIGILTTMATALLLPLIL
GHSAGPEGDRFVTGMALLLTSVIITTSSIANDNLQDLKTGQVLGATPWHQQVALILGVGVGAVVIAPLLSLLYEAYGFVG
APAHDGQDAGSAMPAPQAALMTQIANGITHGELPWTMVLIGAGLGVVLVAAETWLKRRDLTFPALTVGIGMYLPLSVEMT
IAIGGVLGWIAERRLRARVGPKGDAKADKAVGYARRRGVLLASGFLVGESCIGVLLAGTDLLAGHSSAIAVAGKGFAPYA
TGLGLAVFLAGLAVYLRMVSTPAAAQRGA

Specific function: Unknown

COG id: COG1297

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oligopeptide OPT transporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004814
- InterPro:   IPR004813 [H]

Pfam domain/function: PF03169 OPT [H]

EC number: NA

Molecular weight: Translated: 67496; Mature: 67496

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDARSPTITPKTQDRQAELTLRGIALGAAITVVFMAANLYMGLKTGMTFSSSIPAAMISM
CCCCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
GAFRLMGGAGILENNIVQTQASAAGTLCNVILALPGLVLVGHWHGFPFWQTTAVCLLGGL
HHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHH
LGVAFSIPLRRALVSGSDLPYPEGIAAAEVLKTGHEEQGGRGLRDLLGAAAAAGTIGLAT
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHH
TGLKVLGEGLNGAVSLGGAVFRTGTGFSLALVGVGYLVGIGACLALLTGVLIAWGIAVPI
HHHHHHHCCCCCHHHCCCHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTALSPDPGKSAGAAAEAVWSGQVRLMGAGIIAVGGLWTVGSLARPIFGSIRAALSGSGG
HHHCCCCCCCCCCHHHHHHHCCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
LGKDHPREERDLPITWVAAATLALCVPLAILFAYFAAPADLGGLMIVLAVAATLFTVLFG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
FLMAAACGYLAGLLGSSSSPISGIGILTTMATALLLPLILGHSAGPEGDRFVTGMALLLT
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
SVIITTSSIANDNLQDLKTGQVLGATPWHQQVALILGVGVGAVVIAPLLSLLYEAYGFVG
HHHHHHHHHCCCCHHHHCCCCEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC
APAHDGQDAGSAMPAPQAALMTQIANGITHGELPWTMVLIGAGLGVVLVAAETWLKRRDL
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCC
TFPALTVGIGMYLPLSVEMTIAIGGVLGWIAERRLRARVGPKGDAKADKAVGYARRRGVL
CCHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEE
LASGFLVGESCIGVLLAGTDLLAGHSSAIAVAGKGFAPYATGLGLAVFLAGLAVYLRMVS
EECCHHHHHHHHHHHHCCCHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC
TPAAAQRGA
CCCHHCCCC
>Mature Secondary Structure
MDARSPTITPKTQDRQAELTLRGIALGAAITVVFMAANLYMGLKTGMTFSSSIPAAMISM
CCCCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
GAFRLMGGAGILENNIVQTQASAAGTLCNVILALPGLVLVGHWHGFPFWQTTAVCLLGGL
HHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHH
LGVAFSIPLRRALVSGSDLPYPEGIAAAEVLKTGHEEQGGRGLRDLLGAAAAAGTIGLAT
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHH
TGLKVLGEGLNGAVSLGGAVFRTGTGFSLALVGVGYLVGIGACLALLTGVLIAWGIAVPI
HHHHHHHCCCCCHHHCCCHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTALSPDPGKSAGAAAEAVWSGQVRLMGAGIIAVGGLWTVGSLARPIFGSIRAALSGSGG
HHHCCCCCCCCCCHHHHHHHCCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
LGKDHPREERDLPITWVAAATLALCVPLAILFAYFAAPADLGGLMIVLAVAATLFTVLFG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
FLMAAACGYLAGLLGSSSSPISGIGILTTMATALLLPLILGHSAGPEGDRFVTGMALLLT
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
SVIITTSSIANDNLQDLKTGQVLGATPWHQQVALILGVGVGAVVIAPLLSLLYEAYGFVG
HHHHHHHHHCCCCHHHHCCCCEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC
APAHDGQDAGSAMPAPQAALMTQIANGITHGELPWTMVLIGAGLGVVLVAAETWLKRRDL
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCC
TFPALTVGIGMYLPLSVEMTIAIGGVLGWIAERRLRARVGPKGDAKADKAVGYARRRGVL
CCHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEE
LASGFLVGESCIGVLLAGTDLLAGHSSAIAVAGKGFAPYATGLGLAVFLAGLAVYLRMVS
EECCHHHHHHHHHHHHCCCHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC
TPAAAQRGA
CCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]