| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is ucpA [H]
Identifier: 170751299
GI number: 170751299
Start: 5238170
End: 5238898
Strand: Direct
Name: ucpA [H]
Synonym: Mrad2831_4916
Alternate gene names: 170751299
Gene position: 5238170-5238898 (Clockwise)
Preceding gene: 170751296
Following gene: 170751302
Centisome position: 86.18
GC content: 71.88
Gene sequence:
>729_bases ATGGCAGATCTTTCCGGAAAGACGGTCCTGGTCACGGCGGCGGGGCAGGGGATCGGGCGCGCCAGCGCGCTCGCCTTCGC CCGCGCCGGGGCGCGGGTCCACGCCACCGACATCAACGCCGACGCCCTCGCCGCGCTGCGCGCCGACACCCTCAGCACCG CGACCCTCGACGTGCTGGACGGGGACGCGGTCAGGGCCCTGGTCGCGCGCATCGGCGCGGTCGACATCCTGTTCAACTGC GCCGGCACCGTGCACGCCGGCACCATCCTGGAGATGCGCGACGACGAGCTCGACTTCGCCCTCGACCTCAACGTGAAGGC GATGATCCGCACGATCCGGGCTGTCCTGCCCGGGATGCTGGAGCGCCGGGACGGCGCCATCGTCAACATGGCCTCGGTCG CCTCCTCGGTGAAGGGCGTACCCAACCGCTGCGCCTACGGGGTGACGAAGGCGGCGGTGATCGGGCTGACCAAGGCGGTG GCCGCCGACTATGTCGGCCACAACATCCGCTGCAACGCGATCTGCCCCGGCACGGTGGAGAGCCCGTCGCTGCAGGAGCG CATCCGCCAGCAGGGCGACTACGAGCAGACCCGGGCGGCCTTCATCGCGCGCCAGCCGATCGGCCGGCTCGGCACGCCCG AGGAGATCGCCGACCTCGCCGTCTACCTCGCGGGCGCGACCTACACGACCGGCCAGGCCGTCGTGATCGACGGCGGCTGG ACGATCTGA
Upstream 100 bases:
>100_bases AGCCGGGCCCTCCGGACCTGATCGGCGGCCCCGCCGGGCGCGACCCGCGCGACCCGGTCCGGACACCGTCGCGGCGACGC GCAGCCTGCTGGAGCGAGCA
Downstream 100 bases:
>100_bases CCGGGCGGGCTTCAGAACCGCGCGACGAGCCCGACGCCGCCGATCATCAGGGCGCCGCCCAGGACGCGCCACAGGCCGGC CTCGTGGACCTTGAAGCCCA
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MADLSGKTVLVTAAGQGIGRASALAFARAGARVHATDINADALAALRADTLSTATLDVLDGDAVRALVARIGAVDILFNC AGTVHAGTILEMRDDELDFALDLNVKAMIRTIRAVLPGMLERRDGAIVNMASVASSVKGVPNRCAYGVTKAAVIGLTKAV AADYVGHNIRCNAICPGTVESPSLQERIRQQGDYEQTRAAFIARQPIGRLGTPEEIADLAVYLAGATYTTGQAVVIDGGW TI
Sequences:
>Translated_242_residues MADLSGKTVLVTAAGQGIGRASALAFARAGARVHATDINADALAALRADTLSTATLDVLDGDAVRALVARIGAVDILFNC AGTVHAGTILEMRDDELDFALDLNVKAMIRTIRAVLPGMLERRDGAIVNMASVASSVKGVPNRCAYGVTKAAVIGLTKAV AADYVGHNIRCNAICPGTVESPSLQERIRQQGDYEQTRAAFIARQPIGRLGTPEEIADLAVYLAGATYTTGQAVVIDGGW TI >Mature_241_residues ADLSGKTVLVTAAGQGIGRASALAFARAGARVHATDINADALAALRADTLSTATLDVLDGDAVRALVARIGAVDILFNCA GTVHAGTILEMRDDELDFALDLNVKAMIRTIRAVLPGMLERRDGAIVNMASVASSVKGVPNRCAYGVTKAAVIGLTKAVA ADYVGHNIRCNAICPGTVESPSLQERIRQQGDYEQTRAAFIARQPIGRLGTPEEIADLAVYLAGATYTTGQAVVIDGGWT I
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI66933014, Length=245, Percent_Identity=52.6530612244898, Blast_Score=245, Evalue=3e-65, Organism=Homo sapiens, GI32483357, Length=249, Percent_Identity=33.7349397590361, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI15277342, Length=258, Percent_Identity=29.8449612403101, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI7705925, Length=243, Percent_Identity=31.2757201646091, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI126723750, Length=252, Percent_Identity=31.7460317460317, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI40254992, Length=244, Percent_Identity=27.0491803278689, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI142976729, Length=199, Percent_Identity=30.1507537688442, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI210032110, Length=199, Percent_Identity=28.643216080402, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI59889578, Length=224, Percent_Identity=30.3571428571429, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI4504505, Length=189, Percent_Identity=30.1587301587302, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI10190704, Length=255, Percent_Identity=29.8039215686275, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI19923817, Length=255, Percent_Identity=24.3137254901961, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI31542939, Length=214, Percent_Identity=32.2429906542056, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI40807363, Length=199, Percent_Identity=29.6482412060301, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI20149619, Length=196, Percent_Identity=31.1224489795918, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI5031737, Length=248, Percent_Identity=29.4354838709677, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI126723191, Length=182, Percent_Identity=32.967032967033, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI4758504, Length=255, Percent_Identity=25.8823529411765, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI7657478, Length=184, Percent_Identity=30.9782608695652, Blast_Score=64, Evalue=1e-10, Organism=Escherichia coli, GI87082100, Length=256, Percent_Identity=41.015625, Blast_Score=166, Evalue=1e-42, Organism=Escherichia coli, GI1787335, Length=247, Percent_Identity=31.9838056680162, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1786812, Length=251, Percent_Identity=32.2709163346614, Blast_Score=111, Evalue=4e-26, Organism=Escherichia coli, GI1789208, Length=252, Percent_Identity=32.9365079365079, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1790717, Length=251, Percent_Identity=28.2868525896414, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1787905, Length=252, Percent_Identity=33.3333333333333, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1788459, Length=250, Percent_Identity=29.6, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI87082160, Length=259, Percent_Identity=27.4131274131274, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI2367365, Length=244, Percent_Identity=31.5573770491803, Blast_Score=81, Evalue=5e-17, Organism=Escherichia coli, GI1787820, Length=232, Percent_Identity=30.1724137931034, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1789378, Length=257, Percent_Identity=27.2373540856031, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71994604, Length=253, Percent_Identity=32.8063241106719, Blast_Score=111, Evalue=3e-25, Organism=Caenorhabditis elegans, GI25147288, Length=252, Percent_Identity=30.1587301587302, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI71994600, Length=255, Percent_Identity=30.5882352941176, Blast_Score=110, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17562990, Length=268, Percent_Identity=30.2238805970149, Blast_Score=110, Evalue=9e-25, Organism=Caenorhabditis elegans, GI72000259, Length=267, Percent_Identity=32.2097378277154, Blast_Score=109, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17560150, Length=263, Percent_Identity=30.7984790874525, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17559104, Length=267, Percent_Identity=28.8389513108614, Blast_Score=107, Evalue=8e-24, Organism=Caenorhabditis elegans, GI17562910, Length=268, Percent_Identity=26.865671641791, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI193204405, Length=265, Percent_Identity=27.5471698113208, Blast_Score=104, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17563726, Length=265, Percent_Identity=28.6792452830189, Blast_Score=104, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17562904, Length=266, Percent_Identity=29.3233082706767, Blast_Score=102, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17544670, Length=266, Percent_Identity=29.6992481203008, Blast_Score=100, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17562906, Length=274, Percent_Identity=28.8321167883212, Blast_Score=100, Evalue=6e-22, Organism=Caenorhabditis elegans, GI17561402, Length=250, Percent_Identity=32.8, Blast_Score=100, Evalue=9e-22, Organism=Caenorhabditis elegans, GI17562908, Length=271, Percent_Identity=28.7822878228782, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17555706, Length=252, Percent_Identity=30.5555555555556, Blast_Score=97, Evalue=8e-21, Organism=Caenorhabditis elegans, GI17531453, Length=275, Percent_Identity=27.6363636363636, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17560220, Length=274, Percent_Identity=27.007299270073, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17538182, Length=257, Percent_Identity=29.9610894941634, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17508895, Length=192, Percent_Identity=30.7291666666667, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17538480, Length=268, Percent_Identity=29.4776119402985, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17560676, Length=249, Percent_Identity=29.3172690763052, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI193203117, Length=187, Percent_Identity=31.0160427807487, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI193203115, Length=186, Percent_Identity=30.6451612903226, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI115534694, Length=249, Percent_Identity=28.1124497991968, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17560332, Length=269, Percent_Identity=26.0223048327138, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17564282, Length=193, Percent_Identity=27.979274611399, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17551412, Length=263, Percent_Identity=25.8555133079848, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17536651, Length=253, Percent_Identity=25.296442687747, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17538486, Length=270, Percent_Identity=24.8148148148148, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17536025, Length=252, Percent_Identity=25.3968253968254, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17568967, Length=189, Percent_Identity=26.984126984127, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17561272, Length=250, Percent_Identity=28, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17567345, Length=171, Percent_Identity=30.4093567251462, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17565030, Length=273, Percent_Identity=26.3736263736264, Blast_Score=68, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6323882, Length=244, Percent_Identity=28.6885245901639, Blast_Score=77, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6322861, Length=187, Percent_Identity=26.7379679144385, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6324126, Length=256, Percent_Identity=25.390625, Blast_Score=66, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6320089, Length=187, Percent_Identity=26.2032085561497, Blast_Score=63, Evalue=4e-11, Organism=Drosophila melanogaster, GI24639444, Length=256, Percent_Identity=31.640625, Blast_Score=114, Evalue=5e-26, Organism=Drosophila melanogaster, GI23397609, Length=244, Percent_Identity=33.6065573770492, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI24643142, Length=246, Percent_Identity=31.3008130081301, Blast_Score=101, Evalue=5e-22, Organism=Drosophila melanogaster, GI21355319, Length=257, Percent_Identity=34.2412451361868, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI21357041, Length=256, Percent_Identity=28.515625, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI281364892, Length=172, Percent_Identity=35.4651162790698, Blast_Score=88, Evalue=5e-18, Organism=Drosophila melanogaster, GI24644339, Length=254, Percent_Identity=29.5275590551181, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI28571526, Length=260, Percent_Identity=27.6923076923077, Blast_Score=87, Evalue=7e-18, Organism=Drosophila melanogaster, GI24581726, Length=195, Percent_Identity=31.2820512820513, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24584748, Length=235, Percent_Identity=28.936170212766, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI161076933, Length=235, Percent_Identity=28.936170212766, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI24644337, Length=257, Percent_Identity=29.5719844357977, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI17737361, Length=253, Percent_Identity=30.4347826086957, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24640492, Length=195, Percent_Identity=26.1538461538462, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI21355631, Length=176, Percent_Identity=28.9772727272727, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI18859837, Length=187, Percent_Identity=28.8770053475936, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI21358495, Length=200, Percent_Identity=28, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24584744, Length=229, Percent_Identity=27.0742358078603, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI28574402, Length=229, Percent_Identity=27.0742358078603, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 25175; Mature: 25044
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLSGKTVLVTAAGQGIGRASALAFARAGARVHATDINADALAALRADTLSTATLDVLD CCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCEEEEECC GDAVRALVARIGAVDILFNCAGTVHAGTILEMRDDELDFALDLNVKAMIRTIRAVLPGML CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHH ERRDGAIVNMASVASSVKGVPNRCAYGVTKAAVIGLTKAVAADYVGHNIRCNAICPGTVE HHCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC SPSLQERIRQQGDYEQTRAAFIARQPIGRLGTPEEIADLAVYLAGATYTTGQAVVIDGGW CCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEECCCEEEECCCC TI CC >Mature Secondary Structure ADLSGKTVLVTAAGQGIGRASALAFARAGARVHATDINADALAALRADTLSTATLDVLD CCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCEEEEECC GDAVRALVARIGAVDILFNCAGTVHAGTILEMRDDELDFALDLNVKAMIRTIRAVLPGML CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHH ERRDGAIVNMASVASSVKGVPNRCAYGVTKAAVIGLTKAVAADYVGHNIRCNAICPGTVE HHCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC SPSLQERIRQQGDYEQTRAAFIARQPIGRLGTPEEIADLAVYLAGATYTTGQAVVIDGGW CCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEECCCEEEECCCC TI CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]