| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is mmlH [H]
Identifier: 170751217
GI number: 170751217
Start: 5164255
End: 5165490
Strand: Direct
Name: mmlH [H]
Synonym: Mrad2831_4834
Alternate gene names: 170751217
Gene position: 5164255-5165490 (Clockwise)
Preceding gene: 170751216
Following gene: 170751218
Centisome position: 84.97
GC content: 76.13
Gene sequence:
>1236_bases GTGTTCCGCTGGTACCGCGACGTCGGTCCGGCCGAGCGTCGCACCTTCTGGGCCTGTCTGGGCGGGTGGTCGCTCGACGC CCTGGACGTGCAGATGTTCAGCCTCGCCATCCCCGCGCTGGTCGCGAGCTTCGGGCTCAGCCGCTCGGAGGCCGGCCTGA TCGGCGCGGTCACGCTCGTCGCGGCGGCGCTCGGCGGCTGGCTCGGCGGCCTCGCGGCGGACCGGATCGGCCGCGTCCGG GCCCTCCAGATCACGGTGCTGTGGTTCGCGGTCGCGACCTTCCTGGCGGCCTTCGCGCAGAGCTTCGCCCAGCTGCTGAC CCTGAAGGCGCTGCAGGGGATCGGCTTCGGCGCCGAGTGGGCGGCCGGCGCCGCGCTGATGGCGGAGGCGATCGGGCCCG AGCACCGCGGCCGGGCGCTGGGCGCTGTGCAGGGGGGCTGGGCCCTCGGCTGGGGGGCGGCCGTGCTCCTGGCCACCGCG GCCTTCTCGGTGCTGGATCAGGAGACCGCCTGGCGGGCCCTGTTCGCCTGCGGCCTCGCGCCCGCGCTCCTCCTGCTCTA CCTCCGCCGCTCGGTCTCGGAGCCGGCGCGGCCGGTCGGAAGGCCGGCCCGGCCGCCGGCCGGATCGCTCGCGATCTTCG CGCCCGGCCTGCGCCGGGTCACGGTGCTCGCGACGCTGCTCGGCCTGGGCGCCCACGGGGGCTTCCACGCCCTGTTCACG TGGCTGCCCACCTACCTGAGCGTCGAGCGCGGCGCCTCGGTCCTCGGCACCGGGCTCTACCTCGCGATCATCATCGCGGC CTTCGGCCTCGGCTGCCTCGTCGCCGGCGGGCTCGTGGACCGGCTCGGGCGGCGCCGGACGGTGGCGCTCTACGCGGCCG GCTGCATGGCGCTGGTCGTCCTCTACCTGCTGCTGCCGGTCGGCGGCACGGGCCTGCTCCTCCTCGGGGCCCCCCTCGGC TTCTGCACCGCCGGCATCCCCGCGAGCCTCGCGGCCCTGTTCAGCGAGCTCTTCCCGGACGGCCTGCGCGGGACCGGGAT GGGCTTCTGCTACAACGCCGGCCGCCTCGCCTCCGGCCTGCTGCCCCTCGGCGTCGGCCTGCTCAGCGAGATCCTCGGGC TCGGCCGGGCGATCGGCCTGTCGGCCCTCGGTGCCTACGGGCTCGTCCTCCTCGCCGTCGCGCTCCTGCCGGATCGGCAG TCCGGCGGCGCGCTGATCCCCCAGACCGTGAGATGA
Upstream 100 bases:
>100_bases TCGACATCCGCTGAGAGGCCGGCGCCTTGACGCGCCGGCGCGCGCGTGCTCATTTATTCATATAAATGACTAGTCCTCTT CGGAGGGCGGAGGAAAGCCC
Downstream 100 bases:
>100_bases TCCGATGAACCGGCGCCGCTTCTGCCGCACCCTGCTCGCGGGCGGCGTCACGCTCGCGCTTCCGGCCCGCGGCCGCGCGG CCGGGCCCGGCTCCGCCGCC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MFRWYRDVGPAERRTFWACLGGWSLDALDVQMFSLAIPALVASFGLSRSEAGLIGAVTLVAAALGGWLGGLAADRIGRVR ALQITVLWFAVATFLAAFAQSFAQLLTLKALQGIGFGAEWAAGAALMAEAIGPEHRGRALGAVQGGWALGWGAAVLLATA AFSVLDQETAWRALFACGLAPALLLLYLRRSVSEPARPVGRPARPPAGSLAIFAPGLRRVTVLATLLGLGAHGGFHALFT WLPTYLSVERGASVLGTGLYLAIIIAAFGLGCLVAGGLVDRLGRRRTVALYAAGCMALVVLYLLLPVGGTGLLLLGAPLG FCTAGIPASLAALFSELFPDGLRGTGMGFCYNAGRLASGLLPLGVGLLSEILGLGRAIGLSALGAYGLVLLAVALLPDRQ SGGALIPQTVR
Sequences:
>Translated_411_residues MFRWYRDVGPAERRTFWACLGGWSLDALDVQMFSLAIPALVASFGLSRSEAGLIGAVTLVAAALGGWLGGLAADRIGRVR ALQITVLWFAVATFLAAFAQSFAQLLTLKALQGIGFGAEWAAGAALMAEAIGPEHRGRALGAVQGGWALGWGAAVLLATA AFSVLDQETAWRALFACGLAPALLLLYLRRSVSEPARPVGRPARPPAGSLAIFAPGLRRVTVLATLLGLGAHGGFHALFT WLPTYLSVERGASVLGTGLYLAIIIAAFGLGCLVAGGLVDRLGRRRTVALYAAGCMALVVLYLLLPVGGTGLLLLGAPLG FCTAGIPASLAALFSELFPDGLRGTGMGFCYNAGRLASGLLPLGVGLLSEILGLGRAIGLSALGAYGLVLLAVALLPDRQ SGGALIPQTVR >Mature_411_residues MFRWYRDVGPAERRTFWACLGGWSLDALDVQMFSLAIPALVASFGLSRSEAGLIGAVTLVAAALGGWLGGLAADRIGRVR ALQITVLWFAVATFLAAFAQSFAQLLTLKALQGIGFGAEWAAGAALMAEAIGPEHRGRALGAVQGGWALGWGAAVLLATA AFSVLDQETAWRALFACGLAPALLLLYLRRSVSEPARPVGRPARPPAGSLAIFAPGLRRVTVLATLLGLGAHGGFHALFT WLPTYLSVERGASVLGTGLYLAIIIAAFGLGCLVAGGLVDRLGRRRTVALYAAGCMALVVLYLLLPVGGTGLLLLGAPLG FCTAGIPASLAALFSELFPDGLRGTGMGFCYNAGRLASGLLPLGVGLLSEILGLGRAIGLSALGAYGLVLLAVALLPDRQ SGGALIPQTVR
Specific function: Probable uptake of 4-methylmuconolactone [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=399, Percent_Identity=25.5639097744361, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI87082404, Length=395, Percent_Identity=23.7974683544304, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI87082231, Length=459, Percent_Identity=25.7080610021786, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI87081723, Length=381, Percent_Identity=30.1837270341207, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790550, Length=343, Percent_Identity=27.1137026239067, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1786229, Length=417, Percent_Identity=24.220623501199, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI87082159, Length=357, Percent_Identity=29.1316526610644, Blast_Score=68, Evalue=1e-12, Organism=Drosophila melanogaster, GI19922874, Length=423, Percent_Identity=23.4042553191489, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42240; Mature: 42240
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRWYRDVGPAERRTFWACLGGWSLDALDVQMFSLAIPALVASFGLSRSEAGLIGAVTLV CCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH AAALGGWLGGLAADRIGRVRALQITVLWFAVATFLAAFAQSFAQLLTLKALQGIGFGAEW HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH AAGAALMAEAIGPEHRGRALGAVQGGWALGWGAAVLLATAAFSVLDQETAWRALFACGLA HHHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PALLLLYLRRSVSEPARPVGRPARPPAGSLAIFAPGLRRVTVLATLLGLGAHGGFHALFT HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCHHHHHHH WLPTYLSVERGASVLGTGLYLAIIIAAFGLGCLVAGGLVDRLGRRRTVALYAAGCMALVV HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LYLLLPVGGTGLLLLGAPLGFCTAGIPASLAALFSELFPDGLRGTGMGFCYNAGRLASGL HHHHHHCCCCCCEECCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHH LPLGVGLLSEILGLGRAIGLSALGAYGLVLLAVALLPDRQSGGALIPQTVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MFRWYRDVGPAERRTFWACLGGWSLDALDVQMFSLAIPALVASFGLSRSEAGLIGAVTLV CCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH AAALGGWLGGLAADRIGRVRALQITVLWFAVATFLAAFAQSFAQLLTLKALQGIGFGAEW HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH AAGAALMAEAIGPEHRGRALGAVQGGWALGWGAAVLLATAAFSVLDQETAWRALFACGLA HHHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PALLLLYLRRSVSEPARPVGRPARPPAGSLAIFAPGLRRVTVLATLLGLGAHGGFHALFT HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCHHHHHHH WLPTYLSVERGASVLGTGLYLAIIIAAFGLGCLVAGGLVDRLGRRRTVALYAAGCMALVV HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LYLLLPVGGTGLLLLGAPLGFCTAGIPASLAALFSELFPDGLRGTGMGFCYNAGRLASGL HHHHHHCCCCCCEECCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHH LPLGVGLLSEILGLGRAIGLSALGAYGLVLLAVALLPDRQSGGALIPQTVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9461415 [H]