| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is rprY [H]
Identifier: 170751099
GI number: 170751099
Start: 5018168
End: 5018758
Strand: Direct
Name: rprY [H]
Synonym: Mrad2831_4715
Alternate gene names: 170751099
Gene position: 5018168-5018758 (Clockwise)
Preceding gene: 170751098
Following gene: 170751103
Centisome position: 82.57
GC content: 64.64
Gene sequence:
>591_bases ATGCCTAGGATACTCTGCGTTGAGGACGACGCGGAAACGGCGAGCCTGCTCGCGGAAGCCCTGGTTGACCTCGGCTACAC GGTGGAACGCGCCTCGGACGGGGAGGCGGGTTTGTCGGCCATCCAAATGTCACCTCCGGACTTGGTCCTGTGCGACGTGC GCATGCCGGGGATGAACGGCCTGGACTTGCTCGAGCAACTAGCAGCGGCCGCTCCGCACCTCGCGCGGATCCCATTCGTG TTCCTCACGGCGCTCGACGATCGCGACAGCGAGATCGCCGCGCGCCGGAAGGGCGCGGATGACTATCTCACCAAGCCGAT CGACTTCGAGATGCTGGCTGTCGTGGTGGAGCATCGTCTCCGCGCGGGTCGAGGCGGGCAGAGCCAAGACGCGTTCGGCC ATCTGACCGGCCGGGAACGGGAAGTGTTGACCTGGGCCAGCCGCGGGAAGACGTCCGCGGAGATCGCCCTGATCCTCGAT CTGCGGGAGCGAACCGTCAACTTCCATTTCGACCAAGCCATGAAGCGCCTGAACGTCGTCAATAGAACGCATGCGGTGGC CCGTGCGCTCTCGTTGCGGTTGATCGATTGA
Upstream 100 bases:
>100_bases CATGGTGGCCGCCTCGTCATCGAGAGCGAAGAGGGTCGCGGAACCCGTGCTATGCTGGCGCTGCCGCGGGACGGGGCGCT GTCATCCCCGGAGTCGGAGC
Downstream 100 bases:
>100_bases CGGATTTCGGCCGCGTGAACGGTTCCGGCAGACGGTCTGGTCGCGCGCTCCCCATGATGATGTTCTTCGTCCGATCAGAC ATGCGACGGTCCTTGCCTGC
Product: two component LuxR family transcriptional regulator
Products: NADP; 2 glutathione [C]
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MPRILCVEDDAETASLLAEALVDLGYTVERASDGEAGLSAIQMSPPDLVLCDVRMPGMNGLDLLEQLAAAAPHLARIPFV FLTALDDRDSEIAARRKGADDYLTKPIDFEMLAVVVEHRLRAGRGGQSQDAFGHLTGREREVLTWASRGKTSAEIALILD LRERTVNFHFDQAMKRLNVVNRTHAVARALSLRLID
Sequences:
>Translated_196_residues MPRILCVEDDAETASLLAEALVDLGYTVERASDGEAGLSAIQMSPPDLVLCDVRMPGMNGLDLLEQLAAAAPHLARIPFV FLTALDDRDSEIAARRKGADDYLTKPIDFEMLAVVVEHRLRAGRGGQSQDAFGHLTGREREVLTWASRGKTSAEIALILD LRERTVNFHFDQAMKRLNVVNRTHAVARALSLRLID >Mature_195_residues PRILCVEDDAETASLLAEALVDLGYTVERASDGEAGLSAIQMSPPDLVLCDVRMPGMNGLDLLEQLAAAAPHLARIPFVF LTALDDRDSEIAARRKGADDYLTKPIDFEMLAVVVEHRLRAGRGGQSQDAFGHLTGREREVLTWASRGKTSAEIALILDL RERTVNFHFDQAMKRLNVVNRTHAVARALSLRLID
Specific function: Member of the two-component regulatory system rprX/rprY [H]
COG id: COG2197
COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790299, Length=114, Percent_Identity=37.719298245614, Blast_Score=79, Evalue=1e-16, Organism=Escherichia coli, GI1790437, Length=191, Percent_Identity=32.9842931937173, Blast_Score=77, Evalue=7e-16, Organism=Escherichia coli, GI1788394, Length=203, Percent_Identity=31.5270935960591, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI87082012, Length=119, Percent_Identity=33.6134453781513, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1788550, Length=119, Percent_Identity=32.7731092436975, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1786784, Length=121, Percent_Identity=33.0578512396694, Blast_Score=69, Evalue=1e-13, Organism=Escherichia coli, GI1789402, Length=128, Percent_Identity=32.8125, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1788224, Length=62, Percent_Identity=45.1612903225806, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI1788521, Length=186, Percent_Identity=29.5698924731183, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI1786599, Length=106, Percent_Identity=33.0188679245283, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI1790863, Length=113, Percent_Identity=34.5132743362832, Blast_Score=61, Evalue=5e-11, Organism=Escherichia coli, GI1787229, Length=122, Percent_Identity=36.0655737704918, Blast_Score=60, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 21560; Mature: 21429
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRILCVEDDAETASLLAEALVDLGYTVERASDGEAGLSAIQMSPPDLVLCDVRMPGMNG CCCEEEEECCCHHHHHHHHHHHHCCCEEECCCCCCCCCEEEECCCCCEEEEEEECCCCCC LDLLEQLAAAAPHLARIPFVFLTALDDRDSEIAARRKGADDYLTKPIDFEMLAVVVEHRL HHHHHHHHHHCCHHHHCCEEEEEECCCCCHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHH RAGRGGQSQDAFGHLTGREREVLTWASRGKTSAEIALILDLRERTVNFHFDQAMKRLNVV HCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEHHHHHCCCHHHHHHHHHHH NRTHAVARALSLRLID HHHHHHHHHHHHHCCC >Mature Secondary Structure PRILCVEDDAETASLLAEALVDLGYTVERASDGEAGLSAIQMSPPDLVLCDVRMPGMNG CCEEEEECCCHHHHHHHHHHHHCCCEEECCCCCCCCCEEEECCCCCEEEEEEECCCCCC LDLLEQLAAAAPHLARIPFVFLTALDDRDSEIAARRKGADDYLTKPIDFEMLAVVVEHRL HHHHHHHHHHCCHHHHCCEEEEEECCCCCHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHH RAGRGGQSQDAFGHLTGREREVLTWASRGKTSAEIALILDLRERTVNFHFDQAMKRLNVV HCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEHHHHHCCCHHHHHHHHHHH NRTHAVARALSLRLID HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADPH2; oxidized glutathione [C]
Specific reaction: NADPH2 + oxidized glutathione = NADP + 2 glutathione [C]
General reaction: Oxidoreductases; Acting on NADH or NADPH; With a disulfide as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8469117 [H]