| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is torS [H]
Identifier: 170751098
GI number: 170751098
Start: 5016589
End: 5018175
Strand: Direct
Name: torS [H]
Synonym: Mrad2831_4714
Alternate gene names: 170751098
Gene position: 5016589-5018175 (Clockwise)
Preceding gene: 170751093
Following gene: 170751099
Centisome position: 82.54
GC content: 67.67
Gene sequence:
>1587_bases ATGTCGTTGCTGCGCAAGACTCTGGCTTGGCGCCACTCCCTGGTCGCGAAGCTCGGTCTCATGGTGCTCCTCTTTATGGC CGCGACGGAGGGCGCCCGCCTCCTCAGCCTGGATCGGCTCGAACATGCCGACGCGCTCTCCCGCGAGATGCACCACCGCT GGCTAGAGCGCATCCGGATCCTCGGGAGTCTGAACCACGGGATCTCGGACGCGCGCACCGCGGAGGCCGAAATCCTTCTC GGCCCGGATCCCGCGGACCGCCCCGATCGCCTGGCGTCGCTGCAGCGCGTATCCGCCCATCTCGCGGGAATGATGACACG CTACGCGGAGCTGCTCAGGCGAGACGAGGATCGGAGCGAGGTCGTGCGGCTGCAAGACCTATGGCGCGCGCACGCAGCCG TGGCGGAGCGCGTGGCCGCGCTGAGCCGGGACGGCGAGGCCGACCAAGCAATCCTGCTGTTCAACGGCGAGTCGAAGACC ACCTTCGACGCGGCCCGTAACGCCGCCTTCACCCTGACGCTCGTGACAGAAGCGCGCGCCGAGGCCGACCGCGGCCGAGC GGCCGCGGCCATCGCGGCAGCTCAGGACTGGGTCTCCGACCTGATGCTTGGGACCCTGGCCCTGTTCTTCGCCATCACGG TCTACGTCTGGCGCGCCATCTCGCAGCCGCTCCTGCGGCTGGCTGATCGTATGCGGCGTCTCGCGGATTATGAGACCGAC TTCGCGCTCCCCGACGAGAAGCGGCCAGACGAGATTGGGGCGATGGCGGGAGCGCTTGCGGTGTTCCGGAGCAATACCAC CGAGCTTCTTGAGTCGCGCAAGCGCCTAGCCATACAATCCGGCGCGCTAAGCACCGCCTTGCAGAAGGAGCGGGCGCTCG CCGTTGAGCAGCGCAACTTCATAACGACGGTCTCGCATGAATTCCGCACGCCGCTGATGGCGATCGACGGGAACGCGCAG CGGCTGATCGCGATCAAGGACCGGGCCAAGCCGGGCGACATCGCCGATCGGGCACACCGCATCCGGTCCGCCGTGTTCCG GATCGCGAGCCTGATGTCGGGCCTATCGCGGGCGCTGGAGGATACCGGCGGAAACCTCCGTCCGCGCATGCGCCGCTTCG ATCTTGCCGCGATGCTGCGGTCGTTGTGCCGGTACTATCGCGAGATTGGGATGGGTGGTGAGTTGGTCGACGACATGTCG GATGCATCGCTGGAGATCGTCGGCGATCCCGACCTTCTGCATCTGGCCGTCAGCAACCTTCTCTCGAACGGGTTCAAGTA TGCGTCGGACAGCGACCCCGTCCGACTGCGGGCATACCCGTCCGGCGCCGGCGTCGAGATCGTCGTCGAGGACGAGGGCG TGGGCATCCCGCGCGGCGAGATCGGACGCATCCGCGAGCGCTACTACCGGGCGAGCAACGTCGGCACGATACCGGGCACG GGGATCGGGCTGAGCCTCGTGGAGGAGATCGCACGCCGCCATGGTGGCCGCCTCGTCATCGAGAGCGAAGAGGGTCGCGG AACCCGTGCTATGCTGGCGCTGCCGCGGGACGGGGCGCTGTCATCCCCGGAGTCGGAGCATGCCTAG
Upstream 100 bases:
>100_bases GTGGCCCCCGGCGTCATCCTGTGAAATCTGACAGGCTTACATCGGACAGGCCGGGCCTAAGCCTTCGAAGCCCGGCCACT GGATCCGCGGGGGGATCGCC
Downstream 100 bases:
>100_bases GATACTCTGCGTTGAGGACGACGCGGAAACGGCGAGCCTGCTCGCGGAAGCCCTGGTTGACCTCGGCTACACGGTGGAAC GCGCCTCGGACGGGGAGGCG
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 528; Mature: 527
Protein sequence:
>528_residues MSLLRKTLAWRHSLVAKLGLMVLLFMAATEGARLLSLDRLEHADALSREMHHRWLERIRILGSLNHGISDARTAEAEILL GPDPADRPDRLASLQRVSAHLAGMMTRYAELLRRDEDRSEVVRLQDLWRAHAAVAERVAALSRDGEADQAILLFNGESKT TFDAARNAAFTLTLVTEARAEADRGRAAAAIAAAQDWVSDLMLGTLALFFAITVYVWRAISQPLLRLADRMRRLADYETD FALPDEKRPDEIGAMAGALAVFRSNTTELLESRKRLAIQSGALSTALQKERALAVEQRNFITTVSHEFRTPLMAIDGNAQ RLIAIKDRAKPGDIADRAHRIRSAVFRIASLMSGLSRALEDTGGNLRPRMRRFDLAAMLRSLCRYYREIGMGGELVDDMS DASLEIVGDPDLLHLAVSNLLSNGFKYASDSDPVRLRAYPSGAGVEIVVEDEGVGIPRGEIGRIRERYYRASNVGTIPGT GIGLSLVEEIARRHGGRLVIESEEGRGTRAMLALPRDGALSSPESEHA
Sequences:
>Translated_528_residues MSLLRKTLAWRHSLVAKLGLMVLLFMAATEGARLLSLDRLEHADALSREMHHRWLERIRILGSLNHGISDARTAEAEILL GPDPADRPDRLASLQRVSAHLAGMMTRYAELLRRDEDRSEVVRLQDLWRAHAAVAERVAALSRDGEADQAILLFNGESKT TFDAARNAAFTLTLVTEARAEADRGRAAAAIAAAQDWVSDLMLGTLALFFAITVYVWRAISQPLLRLADRMRRLADYETD FALPDEKRPDEIGAMAGALAVFRSNTTELLESRKRLAIQSGALSTALQKERALAVEQRNFITTVSHEFRTPLMAIDGNAQ RLIAIKDRAKPGDIADRAHRIRSAVFRIASLMSGLSRALEDTGGNLRPRMRRFDLAAMLRSLCRYYREIGMGGELVDDMS DASLEIVGDPDLLHLAVSNLLSNGFKYASDSDPVRLRAYPSGAGVEIVVEDEGVGIPRGEIGRIRERYYRASNVGTIPGT GIGLSLVEEIARRHGGRLVIESEEGRGTRAMLALPRDGALSSPESEHA >Mature_527_residues SLLRKTLAWRHSLVAKLGLMVLLFMAATEGARLLSLDRLEHADALSREMHHRWLERIRILGSLNHGISDARTAEAEILLG PDPADRPDRLASLQRVSAHLAGMMTRYAELLRRDEDRSEVVRLQDLWRAHAAVAERVAALSRDGEADQAILLFNGESKTT FDAARNAAFTLTLVTEARAEADRGRAAAAIAAAQDWVSDLMLGTLALFFAITVYVWRAISQPLLRLADRMRRLADYETDF ALPDEKRPDEIGAMAGALAVFRSNTTELLESRKRLAIQSGALSTALQKERALAVEQRNFITTVSHEFRTPLMAIDGNAQR LIAIKDRAKPGDIADRAHRIRSAVFRIASLMSGLSRALEDTGGNLRPRMRRFDLAAMLRSLCRYYREIGMGGELVDDMSD ASLEIVGDPDLLHLAVSNLLSNGFKYASDSDPVRLRAYPSGAGVEIVVEDEGVGIPRGEIGRIRERYYRASNVGTIPGTG IGLSLVEEIARRHGGRLVIESEEGRGTRAMLALPRDGALSSPESEHA
Specific function: Member of the two-component regulatory system torS/torR involved in the anaerobic utilization of trimethylamine-N-oxide (TMAO). Detects the presence of TMAO in the medium and, in response, activates torR via a four-step phosphorelay. When TMAO is removed,
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI87081816, Length=352, Percent_Identity=28.6931818181818, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1786600, Length=221, Percent_Identity=29.8642533936652, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI145693157, Length=248, Percent_Identity=30.241935483871, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI1786783, Length=225, Percent_Identity=27.1111111111111, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1790436, Length=229, Percent_Identity=29.6943231441048, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1786912, Length=228, Percent_Identity=25.8771929824561, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1790861, Length=241, Percent_Identity=27.3858921161826, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI48994928, Length=249, Percent_Identity=27.3092369477912, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1789149, Length=340, Percent_Identity=22.9411764705882, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1788713, Length=270, Percent_Identity=23.7037037037037, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1788393, Length=307, Percent_Identity=25.0814332247557, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1790551, Length=340, Percent_Identity=25.2941176470588, Blast_Score=63, Evalue=6e-11, Organism=Escherichia coli, GI87082128, Length=231, Percent_Identity=23.8095238095238, Blast_Score=62, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR014302 - InterPro: IPR001789 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF01627 Hpt; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 58183; Mature: 58052
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLRKTLAWRHSLVAKLGLMVLLFMAATEGARLLSLDRLEHADALSREMHHRWLERIRI CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGSLNHGISDARTAEAEILLGPDPADRPDRLASLQRVSAHLAGMMTRYAELLRRDEDRSE HHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VVRLQDLWRAHAAVAERVAALSRDGEADQAILLFNGESKTTFDAARNAAFTLTLVTEARA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHCCCEEEEEEEEHHHH EADRGRAAAAIAAAQDWVSDLMLGTLALFFAITVYVWRAISQPLLRLADRMRRLADYETD HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FALPDEKRPDEIGAMAGALAVFRSNTTELLESRKRLAIQSGALSTALQKERALAVEQRNF CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ITTVSHEFRTPLMAIDGNAQRLIAIKDRAKPGDIADRAHRIRSAVFRIASLMSGLSRALE HHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DTGGNLRPRMRRFDLAAMLRSLCRYYREIGMGGELVDDMSDASLEIVGDPDLLHLAVSNL HCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEECCCHHHHHHHHHH LSNGFKYASDSDPVRLRAYPSGAGVEIVVEDEGVGIPRGEIGRIRERYYRASNVGTIPGT HHCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCC GIGLSLVEEIARRHGGRLVIESEEGRGTRAMLALPRDGALSSPESEHA CCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure SLLRKTLAWRHSLVAKLGLMVLLFMAATEGARLLSLDRLEHADALSREMHHRWLERIRI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGSLNHGISDARTAEAEILLGPDPADRPDRLASLQRVSAHLAGMMTRYAELLRRDEDRSE HHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VVRLQDLWRAHAAVAERVAALSRDGEADQAILLFNGESKTTFDAARNAAFTLTLVTEARA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHCCCEEEEEEEEHHHH EADRGRAAAAIAAAQDWVSDLMLGTLALFFAITVYVWRAISQPLLRLADRMRRLADYETD HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FALPDEKRPDEIGAMAGALAVFRSNTTELLESRKRLAIQSGALSTALQKERALAVEQRNF CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ITTVSHEFRTPLMAIDGNAQRLIAIKDRAKPGDIADRAHRIRSAVFRIASLMSGLSRALE HHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DTGGNLRPRMRRFDLAAMLRSLCRYYREIGMGGELVDDMSDASLEIVGDPDLLHLAVSNL HCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEECCCHHHHHHHHHH LSNGFKYASDSDPVRLRAYPSGAGVEIVVEDEGVGIPRGEIGRIRERYYRASNVGTIPGT HHCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCC GIGLSLVEEIARRHGGRLVIESEEGRGTRAMLALPRDGALSSPESEHA CCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]