| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is cya3 [H]
Identifier: 170750960
GI number: 170750960
Start: 4865451
End: 4867028
Strand: Reverse
Name: cya3 [H]
Synonym: Mrad2831_4571
Alternate gene names: 170750960
Gene position: 4867028-4865451 (Counterclockwise)
Preceding gene: 170750967
Following gene: 170750958
Centisome position: 80.08
GC content: 75.1
Gene sequence:
>1578_bases GTGATCTACCGGTTCGGACCCTTCACCCTCGATTCCGCCCGGCGCGAGCTGAGCCGGGACGGCGCGGAGATCGCCGTCGA GCCGCAGGTCTTCGACCTCCTGCGCGTGCTCATCGAGCGGCGCGACCGGGTGGTCAGCCGCGACGACCTGCTGGAGGCGG TCTGGAACGGGCGCATCGTCTCCGAGGCGACACTCGGCAGCCGGATCAACGCGGCCCGGACGGCGATCGGCGACACGGGA ACCGGGCAGCGCTGGATCCGGACCCTCCCGCGCAAGGGCGTGCGCTTCGTCGGCGCCGTGCGGGAGGCCGCATCGGAGGT CTCGCCCGGGATCGCTCCGGAAGACGCGGCGGAGCCGGGCGTCACGTGGCGCGCCGGGCCGCGCTTGCCCGCGGTGGCGG TCCTGCCCTTCACCAACATGAGCGCGGATCCGGAGCAGGACTACTTCGCCGACGGGATGACCGAGGAGATCATCACGGCG CTGTCCCGCGTCAGCGGCCTGTTCGTGATCGCGCGCAACTCGACCTTCACCTACCGGGGCGCGGCGATCGACGTGCGCCG GGTCGGGCAGGAGCTCGGCGTCGGCTACGTGGTCGCGGGCAGCGTGCGCCGCGGCGGCTCGCGCCTGCGCATCACCGGCC AGCTGGTCGATGCCGGGACCGGCGCCCATCTCTGGGCCGACAGCTTCGACGGCGGTCTCGACGACGTCTTCGCCCTGCAG GAGCGGGTCGCCGCGCGCGCCGCCGCCGCGATCGAGCCGACCCTCCAACTGGCGGAGATCCGCCGGCTCGGCCGCGACGC GCCCGCCCATCCGGATGCCTACGACCGGCTGCTCCGGGCCAACGCCCGGCTCGCCGACTTCACCGCCGCCGGCATGGCGG CCGCGCTCGATCACCTGGACGAGGCCCTGGCGCTCGACCCGGGCTACGCACCGGCGATGGCCGCGGCGGCCTATTGCCGG GCGCAGTGCCACTTCCAGGGCTGGATCGCGCAGGGCGAGGCTGAGCGCGCGGCGGCCGTGCGGCTGGCCTGGGGCGCGGT CGAGCGCGCGCCCGGGGACGCGCAGGTGCTGTGGATGGCGGCCTTCGCGGTCTGGAACATGTCGGAGACCGGGCGGGAGC GGGCGCGCGACCTGTTCGGCCGCGCGCTGCTCGTCAACCCGAACTCCGCCCTGGCGCTCACCCTCGCGGGCTGGATCGAG ACCATGTGCGGCCGCGCCGAGGCGGGACGCGCCATGGTCGAGCGGGCGCTGCAGCTCAACCCGCGGGATCCGCGCGGCTG GCTGATGTCGGGCGTGATGGCGGTCGCGGCGGTGAGCGAGGCCGACTATCCCAAGGCGATCCGGTGGGCCGAGCGGGCGC TGGCGCAGAACCGGCGCTTCGCCGTCGCCCTGCGGGCGCTCGCCGTGGCCCATGTCGGGCTCGGCCAGCCGGAGCGCGCC CGGCAGGCGGTCGCCGAGCTCCTGGAGATCGAGCCCGAACTGACGGTCTCGGGCTTCCTGGCGCGGATCCCCTTCCCGGT CGCCGCGCTGGGGCAGCGATACGCCGAGGCGCTGGCCCTTGCCGGCCTGCCCGCCTGA
Upstream 100 bases:
>100_bases TTATGCCCGCCCGGGCCCGTGCTAGAGCGCCCTCCGCCGCGGAGACCGGTTCGGTGAGCAGGGCGCGGAACGCGGACATA GCCCCGCCCAGGAACGCCCC
Downstream 100 bases:
>100_bases GCGGGGCGACGGTCAGGCCCCTTCCCGTTCAGGTCCCTTCCCGGTTGAGCCGGACGACGAGCTGGTCGGCGAACTTGGCG GCGGCCACCGAGAGCGAGCG
Product: transcriptional regulator domain-containing protein
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]
Number of amino acids: Translated: 525; Mature: 525
Protein sequence:
>525_residues MIYRFGPFTLDSARRELSRDGAEIAVEPQVFDLLRVLIERRDRVVSRDDLLEAVWNGRIVSEATLGSRINAARTAIGDTG TGQRWIRTLPRKGVRFVGAVREAASEVSPGIAPEDAAEPGVTWRAGPRLPAVAVLPFTNMSADPEQDYFADGMTEEIITA LSRVSGLFVIARNSTFTYRGAAIDVRRVGQELGVGYVVAGSVRRGGSRLRITGQLVDAGTGAHLWADSFDGGLDDVFALQ ERVAARAAAAIEPTLQLAEIRRLGRDAPAHPDAYDRLLRANARLADFTAAGMAAALDHLDEALALDPGYAPAMAAAAYCR AQCHFQGWIAQGEAERAAAVRLAWGAVERAPGDAQVLWMAAFAVWNMSETGRERARDLFGRALLVNPNSALALTLAGWIE TMCGRAEAGRAMVERALQLNPRDPRGWLMSGVMAVAAVSEADYPKAIRWAERALAQNRRFAVALRALAVAHVGLGQPERA RQAVAELLEIEPELTVSGFLARIPFPVAALGQRYAEALALAGLPA
Sequences:
>Translated_525_residues MIYRFGPFTLDSARRELSRDGAEIAVEPQVFDLLRVLIERRDRVVSRDDLLEAVWNGRIVSEATLGSRINAARTAIGDTG TGQRWIRTLPRKGVRFVGAVREAASEVSPGIAPEDAAEPGVTWRAGPRLPAVAVLPFTNMSADPEQDYFADGMTEEIITA LSRVSGLFVIARNSTFTYRGAAIDVRRVGQELGVGYVVAGSVRRGGSRLRITGQLVDAGTGAHLWADSFDGGLDDVFALQ ERVAARAAAAIEPTLQLAEIRRLGRDAPAHPDAYDRLLRANARLADFTAAGMAAALDHLDEALALDPGYAPAMAAAAYCR AQCHFQGWIAQGEAERAAAVRLAWGAVERAPGDAQVLWMAAFAVWNMSETGRERARDLFGRALLVNPNSALALTLAGWIE TMCGRAEAGRAMVERALQLNPRDPRGWLMSGVMAVAAVSEADYPKAIRWAERALAQNRRFAVALRALAVAHVGLGQPERA RQAVAELLEIEPELTVSGFLARIPFPVAALGQRYAEALALAGLPA >Mature_525_residues MIYRFGPFTLDSARRELSRDGAEIAVEPQVFDLLRVLIERRDRVVSRDDLLEAVWNGRIVSEATLGSRINAARTAIGDTG TGQRWIRTLPRKGVRFVGAVREAASEVSPGIAPEDAAEPGVTWRAGPRLPAVAVLPFTNMSADPEQDYFADGMTEEIITA LSRVSGLFVIARNSTFTYRGAAIDVRRVGQELGVGYVVAGSVRRGGSRLRITGQLVDAGTGAHLWADSFDGGLDDVFALQ ERVAARAAAAIEPTLQLAEIRRLGRDAPAHPDAYDRLLRANARLADFTAAGMAAALDHLDEALALDPGYAPAMAAAAYCR AQCHFQGWIAQGEAERAAAVRLAWGAVERAPGDAQVLWMAAFAVWNMSETGRERARDLFGRALLVNPNSALALTLAGWIE TMCGRAEAGRAMVERALQLNPRDPRGWLMSGVMAVAAVSEADYPKAIRWAERALAQNRRFAVALRALAVAHVGLGQPERA RQAVAELLEIEPELTVSGFLARIPFPVAALGQRYAEALALAGLPA
Specific function: Required For Pcad Induction, A Promoter Upstream Of Cadb That Is Responsible For The Ph-Regulated Expression Of Cada. [C]
COG id: COG5616
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 56487; Mature: 56487
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYRFGPFTLDSARRELSRDGAEIAVEPQVFDLLRVLIERRDRVVSRDDLLEAVWNGRIV CEEECCCCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEE SEATLGSRINAARTAIGDTGTGQRWIRTLPRKGVRFVGAVREAASEVSPGIAPEDAAEPG EHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC VTWRAGPRLPAVAVLPFTNMSADPEQDYFADGMTEEIITALSRVSGLFVIARNSTFTYRG CEECCCCCCCEEEEEECCCCCCCCCHHHHHCCCHHHHHHHHHHHCCEEEEEECCEEEECC AAIDVRRVGQELGVGYVVAGSVRRGGSRLRITGQLVDAGTGAHLWADSFDGGLDDVFALQ CCHHHHHHHHHHCCCEEEECCHHCCCCEEEEEEEEEECCCCCEEECCCCCCCHHHHHHHH ERVAARAAAAIEPTLQLAEIRRLGRDAPAHPDAYDRLLRANARLADFTAAGMAAALDHLD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH EALALDPGYAPAMAAAAYCRAQCHFQGWIAQGEAERAAAVRLAWGAVERAPGDAQVLWMA HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH AFAVWNMSETGRERARDLFGRALLVNPNSALALTLAGWIETMCGRAEAGRAMVERALQLN HHHHHCCCHHHHHHHHHHHCCEEEECCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHCC PRDPRGWLMSGVMAVAAVSEADYPKAIRWAERALAQNRRFAVALRALAVAHVGLGQPERA CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHH RQAVAELLEIEPELTVSGFLARIPFPVAALGQRYAEALALAGLPA HHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIYRFGPFTLDSARRELSRDGAEIAVEPQVFDLLRVLIERRDRVVSRDDLLEAVWNGRIV CEEECCCCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEE SEATLGSRINAARTAIGDTGTGQRWIRTLPRKGVRFVGAVREAASEVSPGIAPEDAAEPG EHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC VTWRAGPRLPAVAVLPFTNMSADPEQDYFADGMTEEIITALSRVSGLFVIARNSTFTYRG CEECCCCCCCEEEEEECCCCCCCCCHHHHHCCCHHHHHHHHHHHCCEEEEEECCEEEECC AAIDVRRVGQELGVGYVVAGSVRRGGSRLRITGQLVDAGTGAHLWADSFDGGLDDVFALQ CCHHHHHHHHHHCCCEEEECCHHCCCCEEEEEEEEEECCCCCEEECCCCCCCHHHHHHHH ERVAARAAAAIEPTLQLAEIRRLGRDAPAHPDAYDRLLRANARLADFTAAGMAAALDHLD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH EALALDPGYAPAMAAAAYCRAQCHFQGWIAQGEAERAAAVRLAWGAVERAPGDAQVLWMA HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH AFAVWNMSETGRERARDLFGRALLVNPNSALALTLAGWIETMCGRAEAGRAMVERALQLN HHHHHCCCHHHHHHHHHHHCCEEEECCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHCC PRDPRGWLMSGVMAVAAVSEADYPKAIRWAERALAQNRRFAVALRALAVAHVGLGQPERA CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHH RQAVAELLEIEPELTVSGFLARIPFPVAALGQRYAEALALAGLPA HHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10485295; 11481432 [H]