| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is ssuA [H]
Identifier: 170750958
GI number: 170750958
Start: 4863458
End: 4864408
Strand: Reverse
Name: ssuA [H]
Synonym: Mrad2831_4569
Alternate gene names: 170750958
Gene position: 4864408-4863458 (Counterclockwise)
Preceding gene: 170750960
Following gene: 170750957
Centisome position: 80.04
GC content: 71.08
Gene sequence:
>951_bases ATGATCCGCCGCCGCACCCTCCTGGCCGGTCTCGGGGCCGGCCTCGCCCTCGGCCCCCTGGCCCGGGCCCGCGCCCAGGG CGCCCCCATCACGATCCGGATGGGCTCGCTCAAGCTGATCCACTCGATCGCGCCGAGCTTCTACGAGCGCTTCACCCCCG CGGGCGTGAAGGTCGAGGTCGTGCCCTTCGAGAGTCCCACCGAATGCAAGAATGCGGTGGTCACCAAGTCGGTGGATTTC GGCACGTTCGGCATCGCCGCCGCGACGCTGGGCGCGGCCGCCGGCGAGCCGCTCGTGGTCATCGCCTCCACCTGCAACCG CGGGATGGCGGTGATCGCCAAGAAGGGCTCCGATATCCGCGCCATCAAGGACCTGCGCGGCAAGCGCGTCGCGATCTGGC CCGGCAGCACCCAGGAGGTCTTCGTCCTAGAGCGGATGCGCATGGAGGGCCTCTCGGTGAAGGACATCACCCCCGTGCGC GTCTCCTTCTCGGAGATGCACATCGCCCTCGCCCGCGGCGACGTCGACGCCTATGTCGGCGCCGAGCCGGGCCCCGGCGT CAGCCTCGCCTCGGGCGTCGGCCAGCTCGTCGAGTACCCCTACGGCACCGAGATGGGCGCGCTGAACATGGTGTTCGGCG CCCACCGCGACACGGTCGCCGAGCGCCCCGACCTCGTCCGGACCATGCTGGAGATCCACCGCAAGGCGACGGACTTCGCG GCCGGCGACCGCGACGCGATGATCGCCATGGCAGTGGCGAAGCTCGGGCAGAAGCGCGAGGCGCTCGAGCTCTCGGCCCC GAACGTCGAGCTGACCTGGCGCCTCGGGCCGAACGAGGTCCGACAGGCCGACGCCTACGCGCAGCACATGCTCGCCCTCA AGCAGATCAAGCGGCTGCCCGAGCCGGGGTTCATCGACACCCGCTTCGTCGACGCGCTGGGGCGGGCGTGA
Upstream 100 bases:
>100_bases CCGTTGCCCGCGAGGCAACGGCACGCTCAGAAAATAGCACTTCCTCGCAACAGGTGGTGCCCGTAGCGTCGGCACATCGG GACCCTGCAGGAGCCGTTCG
Downstream 100 bases:
>100_bases GCACCGGGATCGAGGCCGGCGCCCTGCCGGCGACGGTGACGCCGGCTCCCGCCCGCCGGGCTGGATCCGGGCTCGGGCTC GCCCACCTGCGCCGGCTGGC
Product: NMT1/THI5-like domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MIRRRTLLAGLGAGLALGPLARARAQGAPITIRMGSLKLIHSIAPSFYERFTPAGVKVEVVPFESPTECKNAVVTKSVDF GTFGIAAATLGAAAGEPLVVIASTCNRGMAVIAKKGSDIRAIKDLRGKRVAIWPGSTQEVFVLERMRMEGLSVKDITPVR VSFSEMHIALARGDVDAYVGAEPGPGVSLASGVGQLVEYPYGTEMGALNMVFGAHRDTVAERPDLVRTMLEIHRKATDFA AGDRDAMIAMAVAKLGQKREALELSAPNVELTWRLGPNEVRQADAYAQHMLALKQIKRLPEPGFIDTRFVDALGRA
Sequences:
>Translated_316_residues MIRRRTLLAGLGAGLALGPLARARAQGAPITIRMGSLKLIHSIAPSFYERFTPAGVKVEVVPFESPTECKNAVVTKSVDF GTFGIAAATLGAAAGEPLVVIASTCNRGMAVIAKKGSDIRAIKDLRGKRVAIWPGSTQEVFVLERMRMEGLSVKDITPVR VSFSEMHIALARGDVDAYVGAEPGPGVSLASGVGQLVEYPYGTEMGALNMVFGAHRDTVAERPDLVRTMLEIHRKATDFA AGDRDAMIAMAVAKLGQKREALELSAPNVELTWRLGPNEVRQADAYAQHMLALKQIKRLPEPGFIDTRFVDALGRA >Mature_316_residues MIRRRTLLAGLGAGLALGPLARARAQGAPITIRMGSLKLIHSIAPSFYERFTPAGVKVEVVPFESPTECKNAVVTKSVDF GTFGIAAATLGAAAGEPLVVIASTCNRGMAVIAKKGSDIRAIKDLRGKRVAIWPGSTQEVFVLERMRMEGLSVKDITPVR VSFSEMHIALARGDVDAYVGAEPGPGVSLASGVGQLVEYPYGTEMGALNMVFGAHRDTVAERPDLVRTMLEIHRKATDFA AGDRDAMIAMAVAKLGQKREALELSAPNVELTWRLGPNEVRQADAYAQHMLALKQIKRLPEPGFIDTRFVDALGRA
Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081803, Length=251, Percent_Identity=23.1075697211155, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010067 - InterPro: IPR015168 - InterPro: IPR001638 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 33874; Mature: 33874
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRRTLLAGLGAGLALGPLARARAQGAPITIRMGSLKLIHSIAPSFYERFTPAGVKVEV CCCCHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEE VPFESPTECKNAVVTKSVDFGTFGIAAATLGAAAGEPLVVIASTCNRGMAVIAKKGSDIR EECCCCHHHHHCEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCHH AIKDLRGKRVAIWPGSTQEVFVLERMRMEGLSVKDITPVRVSFSEMHIALARGDVDAYVG HHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEHHHEEEEEECCCCCEEEC AEPGPGVSLASGVGQLVEYPYGTEMGALNMVFGAHRDTVAERPDLVRTMLEIHRKATDFA CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHCC AGDRDAMIAMAVAKLGQKREALELSAPNVELTWRLGPNEVRQADAYAQHMLALKQIKRLP CCCCHHHHHHHHHHHCCCCHHHEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCC EPGFIDTRFVDALGRA CCCCCHHHHHHHHCCC >Mature Secondary Structure MIRRRTLLAGLGAGLALGPLARARAQGAPITIRMGSLKLIHSIAPSFYERFTPAGVKVEV CCCCHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEE VPFESPTECKNAVVTKSVDFGTFGIAAATLGAAAGEPLVVIASTCNRGMAVIAKKGSDIR EECCCCHHHHHCEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCHH AIKDLRGKRVAIWPGSTQEVFVLERMRMEGLSVKDITPVRVSFSEMHIALARGDVDAYVG HHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEHHHEEEEEECCCCCEEEC AEPGPGVSLASGVGQLVEYPYGTEMGALNMVFGAHRDTVAERPDLVRTMLEIHRKATDFA CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHCC AGDRDAMIAMAVAKLGQKREALELSAPNVELTWRLGPNEVRQADAYAQHMLALKQIKRLP CCCCHHHHHHHHHHHCCCCHHHEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCC EPGFIDTRFVDALGRA CCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10506196; 8905232; 9278503 [H]