Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is 170750955

Identifier: 170750955

GI number: 170750955

Start: 4860912

End: 4861826

Strand: Reverse

Name: 170750955

Synonym: Mrad2831_4566

Alternate gene names: NA

Gene position: 4861826-4860912 (Counterclockwise)

Preceding gene: 170750956

Following gene: 170750954

Centisome position: 79.99

GC content: 73.55

Gene sequence:

>915_bases
ATGGACACCGCCCCTGACGATCCCCGCCGGCCCGAGAACCGCCTCGCCTACCGCGCCGCCGTGGACCGGCCGCGCCTGAC
GCTGCCCGGGGGCCGGCACGTCGCCGTCTGGCCGGTGGTCAACGTCGAGCACTGGCTGATCGACCACCCGATGCCGCGCC
AGATCCTGGCGCCGCCGACCGGGGCCAGCCTGCTGCCGGACATCCCGAACTGGGCGTGGCACGAGTACGGCATGCGGGTC
GGCTTCTGGCGGTTCCTCGAGGCGTTCGAGAGCCGGGGCATCCGCCCGACCCTGTCGATCAACGGCTCGGTCTGCACGGC
CTATCCGCGCATCGCCGAGGCCGCCCACGCGGCCGGCTGGGAGTTCATGGCCCACGGCTTCCACCAGGTCCCGACCCACA
GGGTCGCGGACCAGCCGGAGATGATCGCCCGCACCGTCGCAGCGATCACCGGAACCACGGGGCGCCCGCCGCGCGGCTGG
CTGGGGCCGGGCCTCACCGAGACCCTCGACACGCCCGACCACCTGCGCGCGGCCGGGCTCGAGTACGTCGGCGACTTCGT
GGTCGACGATCGCCCCTGCCGGGTGGCGACGCGCACGGGCGACCTCGTCGCCCTCCCCTACTCGGTCGAGCTCAACGACA
TCCCGCTGCTGGCCATCCAGCACCACCGGGCCGACGAGTTCGTGGAGCGGGCGCTCGCCCATCTCGACCGGCTCGCCGCC
GAGGCTGCCGGCTCCGGCCCCCTCGGCGGCGCCAAGGTGATGGGCTTCGCGATCCACCCCTACATCACCGGCGTCCCGCA
CCGGATCCACCTGCTGGAGCGGCTGCTCGACGCCATCCTGGCCCGCGACGACGCGGTGTTCATGCAGGGGGTCGAGATCC
TCGACTGGTACCGCGCCACCGGCGACGCATCCTGA

Upstream 100 bases:

>100_bases
TGCCGCGGCGGCGCGACGTGTCGAGCCCGGCCTTCAACGACCTGCGCCGGATGCTCGCGGCCCAGCTCCACAGCCACCAC
GCCCCGCGGGCCGCTGCCTG

Downstream 100 bases:

>100_bases
GCCGTCCGGGCGCATCGGGCCGCGGGGGAGGACGACCGTGCGATCCACCGCTGCACCTCGAGATGCGGGCGCGGGCAGGG
CCTAGCCCCCCGCGCGCCGA

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: Polysaccharide Deacetylase Family Protein; Urate Catabolism Protein; Chitooligosaccharide Deacetylase; Polysaccharide Deacetylase Domain Protein; Chitin Deacetylase; Deacetylase Protein; Polysaccharide Deacetylase Family

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MDTAPDDPRRPENRLAYRAAVDRPRLTLPGGRHVAVWPVVNVEHWLIDHPMPRQILAPPTGASLLPDIPNWAWHEYGMRV
GFWRFLEAFESRGIRPTLSINGSVCTAYPRIAEAAHAAGWEFMAHGFHQVPTHRVADQPEMIARTVAAITGTTGRPPRGW
LGPGLTETLDTPDHLRAAGLEYVGDFVVDDRPCRVATRTGDLVALPYSVELNDIPLLAIQHHRADEFVERALAHLDRLAA
EAAGSGPLGGAKVMGFAIHPYITGVPHRIHLLERLLDAILARDDAVFMQGVEILDWYRATGDAS

Sequences:

>Translated_304_residues
MDTAPDDPRRPENRLAYRAAVDRPRLTLPGGRHVAVWPVVNVEHWLIDHPMPRQILAPPTGASLLPDIPNWAWHEYGMRV
GFWRFLEAFESRGIRPTLSINGSVCTAYPRIAEAAHAAGWEFMAHGFHQVPTHRVADQPEMIARTVAAITGTTGRPPRGW
LGPGLTETLDTPDHLRAAGLEYVGDFVVDDRPCRVATRTGDLVALPYSVELNDIPLLAIQHHRADEFVERALAHLDRLAA
EAAGSGPLGGAKVMGFAIHPYITGVPHRIHLLERLLDAILARDDAVFMQGVEILDWYRATGDAS
>Mature_304_residues
MDTAPDDPRRPENRLAYRAAVDRPRLTLPGGRHVAVWPVVNVEHWLIDHPMPRQILAPPTGASLLPDIPNWAWHEYGMRV
GFWRFLEAFESRGIRPTLSINGSVCTAYPRIAEAAHAAGWEFMAHGFHQVPTHRVADQPEMIARTVAAITGTTGRPPRGW
LGPGLTETLDTPDHLRAAGLEYVGDFVVDDRPCRVATRTGDLVALPYSVELNDIPLLAIQHHRADEFVERALAHLDRLAA
EAAGSGPLGGAKVMGFAIHPYITGVPHRIHLLERLLDAILARDDAVFMQGVEILDWYRATGDAS

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33564; Mature: 33564

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTAPDDPRRPENRLAYRAAVDRPRLTLPGGRHVAVWPVVNVEHWLIDHPMPRQILAPPT
CCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCEEEEEEEECCHHHCCCCCCCHHHCCCCC
GASLLPDIPNWAWHEYGMRVGFWRFLEAFESRGIRPTLSINGSVCTAYPRIAEAAHAAGW
CCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCEEECCHHHHHHHHHCCH
EFMAHGFHQVPTHRVADQPEMIARTVAAITGTTGRPPRGWLGPGLTETLDTPDHLRAAGL
HHHHCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHH
EYVGDFVVDDRPCRVATRTGDLVALPYSVELNDIPLLAIQHHRADEFVERALAHLDRLAA
HHHHHHHCCCCCCEEEECCCCEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHH
EAAGSGPLGGAKVMGFAIHPYITGVPHRIHLLERLLDAILARDDAVFMQGVEILDWYRAT
HHCCCCCCCCHHEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
GDAS
CCCC
>Mature Secondary Structure
MDTAPDDPRRPENRLAYRAAVDRPRLTLPGGRHVAVWPVVNVEHWLIDHPMPRQILAPPT
CCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCEEEEEEEECCHHHCCCCCCCHHHCCCCC
GASLLPDIPNWAWHEYGMRVGFWRFLEAFESRGIRPTLSINGSVCTAYPRIAEAAHAAGW
CCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCEEECCHHHHHHHHHCCH
EFMAHGFHQVPTHRVADQPEMIARTVAAITGTTGRPPRGWLGPGLTETLDTPDHLRAAGL
HHHHCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHH
EYVGDFVVDDRPCRVATRTGDLVALPYSVELNDIPLLAIQHHRADEFVERALAHLDRLAA
HHHHHHHCCCCCCEEEECCCCEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHH
EAAGSGPLGGAKVMGFAIHPYITGVPHRIHLLERLLDAILARDDAVFMQGVEILDWYRAT
HHCCCCCCCCHHEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
GDAS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA