| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750954
Identifier: 170750954
GI number: 170750954
Start: 4858957
End: 4860762
Strand: Reverse
Name: 170750954
Synonym: Mrad2831_4565
Alternate gene names: NA
Gene position: 4860762-4858957 (Counterclockwise)
Preceding gene: 170750955
Following gene: 170750953
Centisome position: 79.98
GC content: 77.91
Gene sequence:
>1806_bases GTGCCCCCCTTCCCGACGATCCCGCTCCTGCACGCGGCCTACGCCGACGGCCTCGACCCGCGCGCCGTCGTGGCCGAGGC CTACCGGCGGCTCGCCGCGGTGGACGATCCCGGCATCTTCCTCGCGCTCGTCCCGGAGGCGGACGCCCGGGACGCCGCGG CGGCGCTCCCGCCCTTCGACCCCGCTACGATGCCGCTCTGGGGCGTGCCCTTCGCCGTGAAGGACAACATCGACGTCGCC GGCCTGCCGACCACCGCCGCCTGCCCGGACTTCGCCCACACCCCCGCCGAGACCGCACCCGCGGTGGCACGGCTCCGCGC GGCGGGCGCGATCCTGATCGGCAAGACCAACCTCGACCAGTTCGCCACCGGGCTGGTCGGCCTGCGCACCCCCTACCCGG CCCCGCGCAACGCGATCGATCCGGCCTACGTGCCCGGCGGGTCCAGCAGCGGCTCCGCCGTGGCGGTGGCCCACGGGATC GTCGCCTTCGCGCTCGGCACCGATACGGCGGGGTCGGGCCGGGTGCCGGCGGCGCTCAACAACGTCGTCGGGCTGAAGCC CTCCCTCGGGGCGATCTCCAGCCGCGGGATGCTGCCGGCCTGCCGGACCCTCGACACGCTCTCGGTCTTCGCCGGCACCG TCGCGGACGCCGACGCGGCCTTCCGGGTCATGCTGGGTCCGGACGGGGCCGATCCCTGGTCGCGGGCCCTGCCGGTGCCG GCCGCCCCCGCCGGCCTGCCGCCGGGCCTGCGCCTCGGGCTCCCGGACGCGGCGAGCCTCCGCTTCGGCGGCGACGGGCT CTCGGAGGCGGCCTTCGCGGCGACGGTCGCCGATCTCGAAACTCTCGCCGGGGCGGCGGCGCCGGTGGATCTCGCGCCGA TGTTCGCCGTCGCGGCCCTGCTCTACGACGGCCCGTGGGTCGCCGAGCGCTACGCGGCGATCCGTGCGGTGATGGAGACG CGCCCCGAGATCCTGCATCCGACGACGCGGACGGTCATCGCCGCCGCCGAGCGCCACAGCGCCGCGGACGCCTTCGCGGG CCTCTACCGCCTCGCGGCGCTGCGCCGGGAGGCGGACGCGGTCTGGGACCGGATCGACGTCCTCGCCGTGCCGACCTACC CGCGCCCGCAGACCTGCGCGGCCCTGGCGGCCGACCCGATCGGGCCGAACAGCGAGCTCGGCACCTACACCAACTTCGTC AACCTGCTGGACTGGTGCGCCCTGGCGGTGCCGGGGCGGCCCCGCGCCGACGGCTTCCCCGCCGGGATCACCCTGCTGGC GCCGCGCGGCTCGGACGGGCTGCTCGCCGCCCTGGGCGCGCGCCTGCACGCGGCGTCCGCGCCGCGGATCGGCGCGGGCA CGATCCCGGTGCCGACGGCGGAGCCGGGACCGGCCGCGGCCGGACCGGACGCGATCGAGCTGGCGGTCGTCGGGGCGCAT CTCTCGGGGCTGCCGCTGAACCGCGAGCTCGCCGGGTGCGGCGCGCGCTTCCTGCGGGCGGTGCCGACCGCGCGGGACTA TCGCCTCTACGCCCTGCCGGGCGGCCCCCCGCAGCGCCCGGGCCTGCTTCGGGTGGCGGCCGGCGAAGGCGCCGCCATCG AGACCGAGGTGTGGGCCCTGCCGCCCGCCGCGTTCGGACGCTTCGTCGCCGCCATCCCGGCGCCGCTCGGGATCGGCACC CTGCGGCTCGCCGACGGTACGGCGCCCAAGGGCTTCCTGGTCGAGCCGGCCGGCCTCGACGGGGCGGCCGAGATCACGCG CTTCGGCGGCTGGCGCGCCTACCTGGCCGACCGCGCGGCCGCGTAG
Upstream 100 bases:
>100_bases GCTGCACCTCGAGATGCGGGCGCGGGCAGGGCCTAGCCCCCCGCGCGCCGAATCCCCTCGCGCGCGAACTTGTCTGCCGA CCTGAGAACGAGGAGCCGCC
Downstream 100 bases:
>100_bases CCTCCCGGGCCCGGGACTGACATCGGCCGCCGAAGGGAAACCGGCTCCGGCCCGTCACGCGGGGACAGGGCGCCCGCGCC GCTGCTAGGCTGCCGCCCGG
Product: allophanate hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 601; Mature: 600
Protein sequence:
>601_residues MPPFPTIPLLHAAYADGLDPRAVVAEAYRRLAAVDDPGIFLALVPEADARDAAAALPPFDPATMPLWGVPFAVKDNIDVA GLPTTAACPDFAHTPAETAPAVARLRAAGAILIGKTNLDQFATGLVGLRTPYPAPRNAIDPAYVPGGSSSGSAVAVAHGI VAFALGTDTAGSGRVPAALNNVVGLKPSLGAISSRGMLPACRTLDTLSVFAGTVADADAAFRVMLGPDGADPWSRALPVP AAPAGLPPGLRLGLPDAASLRFGGDGLSEAAFAATVADLETLAGAAAPVDLAPMFAVAALLYDGPWVAERYAAIRAVMET RPEILHPTTRTVIAAAERHSAADAFAGLYRLAALRREADAVWDRIDVLAVPTYPRPQTCAALAADPIGPNSELGTYTNFV NLLDWCALAVPGRPRADGFPAGITLLAPRGSDGLLAALGARLHAASAPRIGAGTIPVPTAEPGPAAAGPDAIELAVVGAH LSGLPLNRELAGCGARFLRAVPTARDYRLYALPGGPPQRPGLLRVAAGEGAAIETEVWALPPAAFGRFVAAIPAPLGIGT LRLADGTAPKGFLVEPAGLDGAAEITRFGGWRAYLADRAAA
Sequences:
>Translated_601_residues MPPFPTIPLLHAAYADGLDPRAVVAEAYRRLAAVDDPGIFLALVPEADARDAAAALPPFDPATMPLWGVPFAVKDNIDVA GLPTTAACPDFAHTPAETAPAVARLRAAGAILIGKTNLDQFATGLVGLRTPYPAPRNAIDPAYVPGGSSSGSAVAVAHGI VAFALGTDTAGSGRVPAALNNVVGLKPSLGAISSRGMLPACRTLDTLSVFAGTVADADAAFRVMLGPDGADPWSRALPVP AAPAGLPPGLRLGLPDAASLRFGGDGLSEAAFAATVADLETLAGAAAPVDLAPMFAVAALLYDGPWVAERYAAIRAVMET RPEILHPTTRTVIAAAERHSAADAFAGLYRLAALRREADAVWDRIDVLAVPTYPRPQTCAALAADPIGPNSELGTYTNFV NLLDWCALAVPGRPRADGFPAGITLLAPRGSDGLLAALGARLHAASAPRIGAGTIPVPTAEPGPAAAGPDAIELAVVGAH LSGLPLNRELAGCGARFLRAVPTARDYRLYALPGGPPQRPGLLRVAAGEGAAIETEVWALPPAAFGRFVAAIPAPLGIGT LRLADGTAPKGFLVEPAGLDGAAEITRFGGWRAYLADRAAA >Mature_600_residues PPFPTIPLLHAAYADGLDPRAVVAEAYRRLAAVDDPGIFLALVPEADARDAAAALPPFDPATMPLWGVPFAVKDNIDVAG LPTTAACPDFAHTPAETAPAVARLRAAGAILIGKTNLDQFATGLVGLRTPYPAPRNAIDPAYVPGGSSSGSAVAVAHGIV AFALGTDTAGSGRVPAALNNVVGLKPSLGAISSRGMLPACRTLDTLSVFAGTVADADAAFRVMLGPDGADPWSRALPVPA APAGLPPGLRLGLPDAASLRFGGDGLSEAAFAATVADLETLAGAAAPVDLAPMFAVAALLYDGPWVAERYAAIRAVMETR PEILHPTTRTVIAAAERHSAADAFAGLYRLAALRREADAVWDRIDVLAVPTYPRPQTCAALAADPIGPNSELGTYTNFVN LLDWCALAVPGRPRADGFPAGITLLAPRGSDGLLAALGARLHAASAPRIGAGTIPVPTAEPGPAAAGPDAIELAVVGAHL SGLPLNRELAGCGARFLRAVPTARDYRLYALPGGPPQRPGLLRVAAGEGAAIETEVWALPPAAFGRFVAAIPAPLGIGTL RLADGTAPKGFLVEPAGLDGAAEITRFGGWRAYLADRAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amidase family [H]
Homologues:
Organism=Homo sapiens, GI222831590, Length=219, Percent_Identity=34.703196347032, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI195972892, Length=197, Percent_Identity=30.9644670050761, Blast_Score=81, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17543272, Length=431, Percent_Identity=29.2343387470998, Blast_Score=125, Evalue=7e-29, Organism=Caenorhabditis elegans, GI17537465, Length=161, Percent_Identity=34.1614906832298, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17556264, Length=168, Percent_Identity=31.547619047619, Blast_Score=77, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6319685, Length=548, Percent_Identity=44.3430656934307, Blast_Score=408, Evalue=1e-114, Organism=Saccharomyces cerevisiae, GI6323950, Length=184, Percent_Identity=35.8695652173913, Blast_Score=87, Evalue=8e-18, Organism=Drosophila melanogaster, GI24648113, Length=491, Percent_Identity=28.9205702647658, Blast_Score=116, Evalue=4e-26, Organism=Drosophila melanogaster, GI24652985, Length=137, Percent_Identity=36.4963503649635, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI19922090, Length=137, Percent_Identity=36.4963503649635, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24652981, Length=137, Percent_Identity=36.4963503649635, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24652983, Length=137, Percent_Identity=36.4963503649635, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI21356731, Length=152, Percent_Identity=30.9210526315789, Blast_Score=66, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000120 - InterPro: IPR020556 [H]
Pfam domain/function: PF01425 Amidase [H]
EC number: =3.5.1.4 [H]
Molecular weight: Translated: 61056; Mature: 60925
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPFPTIPLLHAAYADGLDPRAVVAEAYRRLAAVDDPGIFLALVPEADARDAAAALPPFD CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHCCCCCCC PATMPLWGVPFAVKDNIDVAGLPTTAACPDFAHTPAETAPAVARLRAAGAILIGKTNLDQ CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCHHH FATGLVGLRTPYPAPRNAIDPAYVPGGSSSGSAVAVAHGIVAFALGTDTAGSGRVPAALN HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHCEEEEEECCCCCCCCCCCHHHH NVVGLKPSLGAISSRGMLPACRTLDTLSVFAGTVADADAAFRVMLGPDGADPWSRALPVP HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHCCCCC AAPAGLPPGLRLGLPDAASLRFGGDGLSEAAFAATVADLETLAGAAAPVDLAPMFAVAAL CCCCCCCCCCEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LYDGPWVAERYAAIRAVMETRPEILHPTTRTVIAAAERHSAADAFAGLYRLAALRREADA HHCCCHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VWDRIDVLAVPTYPRPQTCAALAADPIGPNSELGTYTNFVNLLDWCALAVPGRPRADGFP HHCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC AGITLLAPRGSDGLLAALGARLHAASAPRIGAGTIPVPTAEPGPAAAGPDAIELAVVGAH CCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECH LSGLPLNRELAGCGARFLRAVPTARDYRLYALPGGPPQRPGLLRVAAGEGAAIETEVWAL HCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEECCCCCEEEEEEEEC PPAAFGRFVAAIPAPLGIGTLRLADGTAPKGFLVEPAGLDGAAEITRFGGWRAYLADRAA CHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEECCCCCCHHHHHHCCCCHHHHHHHCC A C >Mature Secondary Structure PPFPTIPLLHAAYADGLDPRAVVAEAYRRLAAVDDPGIFLALVPEADARDAAAALPPFD CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHCCCCCCC PATMPLWGVPFAVKDNIDVAGLPTTAACPDFAHTPAETAPAVARLRAAGAILIGKTNLDQ CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCHHH FATGLVGLRTPYPAPRNAIDPAYVPGGSSSGSAVAVAHGIVAFALGTDTAGSGRVPAALN HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHCEEEEEECCCCCCCCCCCHHHH NVVGLKPSLGAISSRGMLPACRTLDTLSVFAGTVADADAAFRVMLGPDGADPWSRALPVP HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHCCCCC AAPAGLPPGLRLGLPDAASLRFGGDGLSEAAFAATVADLETLAGAAAPVDLAPMFAVAAL CCCCCCCCCCEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LYDGPWVAERYAAIRAVMETRPEILHPTTRTVIAAAERHSAADAFAGLYRLAALRREADA HHCCCHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VWDRIDVLAVPTYPRPQTCAALAADPIGPNSELGTYTNFVNLLDWCALAVPGRPRADGFP HHCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC AGITLLAPRGSDGLLAALGARLHAASAPRIGAGTIPVPTAEPGPAAAGPDAIELAVVGAH CCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECH LSGLPLNRELAGCGARFLRAVPTARDYRLYALPGGPPQRPGLLRVAAGEGAAIETEVWAL HCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEECCCCCEEEEEEEEC PPAAFGRFVAAIPAPLGIGTLRLADGTAPKGFLVEPAGLDGAAEITRFGGWRAYLADRAA CHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEECCCCCCHHHHHHCCCCHHHHHHHCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9809753 [H]