| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is serB [C]
Identifier: 170750920
GI number: 170750920
Start: 4809287
End: 4810180
Strand: Reverse
Name: serB [C]
Synonym: Mrad2831_4531
Alternate gene names: 170750920
Gene position: 4810180-4809287 (Counterclockwise)
Preceding gene: 170750922
Following gene: 170750912
Centisome position: 79.14
GC content: 74.27
Gene sequence:
>894_bases ATGCTGGTCGCGATCCTGATAGCAAACCCGGATCGGCCGTCCATCACCGACGCGGTGCTGGCCGAGACGCGCGCCGTGCT GCGGACGGAGCACCAGCCGCGGATCCTGCACGGGGAGGTGGCGGCCGAGCTGCTGGTGCCGGGCGAGCCCGCGGCCGCGG CGTCCCTCACCGACAGGCTGCGGACGGCGCTCGCCGGCGAGCCGATCGACCTCGCGGTGCTGCCCGCCGACGCGCACCGG CGCAAGCGCCTGTTCCTGGCCGACATGGACTCCACCATGATCGAGCAGGAATGCATCGACGAGCTCGCCGGGACGCTCGG CCTCAAGGACCGCGTGGCGGCGATCACCGAGCGGGCGATGCGGGGCGAGATCGCCTTCGAGCCGGCCCTGCGCGAGCGCG TCGCGCTGCTGAAGGACATCCCGGTCGGCGCCGTCGACGGGCTGATCGCCGAGCACCTGACCCTGACCCCGGGCGGCCGC ACGCTGGTGCGGACGATGCGGGCGCACGGCGCCCATACCTGCCTGGTCTCCGGGGGCTTCACGCTGTTCACCGGCCCGAT CGCCGCGATGATCGGCTTCGACGAGCACCGGTCCAACGTGCTGGGCGTGGCGGACGGGCGGCTCACCGGCCGCGTCGAGG ACCCGATCGTCGGGAAGGCCGAGAAGCGCGCGACGCTGATCGCGCTGCGCGGAGATCTGGGCCTCGGCGCCGCCGAGACC CTCGCGGTCGGCGACGGCGCCAACGACCTCGACATGCTGGGCGAGGCCGGCCTCGGGGTGGCGTTCCGGGCGAAGCCCGC GGTCGCGGCCGCGGCGCGGGTCCGGGTCGAGCACGGCGACCTCACCGCGCTCCTGTACCTGCAAGGCTACGCGGCGGCGG AGTTCGTCGGGTGA
Upstream 100 bases:
>100_bases GCCAGCGCCGACTTGCCCGAGGCGGTGGGCCCTGCGATGAGGATCGCGGCCGGGCGCCGCCCGGCTTCCTCCCGGTCTGG CGGCAAGGCGAAACTCCACG
Downstream 100 bases:
>100_bases GGCTCAGTGCAGGGTGCGGGTCAGGGCGATGACCGCGCCGAGCACCGCCAGGGTCTGAAAGCCGATCGCGCCGACGAGCC AGCGTACCGTCTCGACCTTC
Product: phosphoserine phosphatase SerB
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MLVAILIANPDRPSITDAVLAETRAVLRTEHQPRILHGEVAAELLVPGEPAAAASLTDRLRTALAGEPIDLAVLPADAHR RKRLFLADMDSTMIEQECIDELAGTLGLKDRVAAITERAMRGEIAFEPALRERVALLKDIPVGAVDGLIAEHLTLTPGGR TLVRTMRAHGAHTCLVSGGFTLFTGPIAAMIGFDEHRSNVLGVADGRLTGRVEDPIVGKAEKRATLIALRGDLGLGAAET LAVGDGANDLDMLGEAGLGVAFRAKPAVAAAARVRVEHGDLTALLYLQGYAAAEFVG
Sequences:
>Translated_297_residues MLVAILIANPDRPSITDAVLAETRAVLRTEHQPRILHGEVAAELLVPGEPAAAASLTDRLRTALAGEPIDLAVLPADAHR RKRLFLADMDSTMIEQECIDELAGTLGLKDRVAAITERAMRGEIAFEPALRERVALLKDIPVGAVDGLIAEHLTLTPGGR TLVRTMRAHGAHTCLVSGGFTLFTGPIAAMIGFDEHRSNVLGVADGRLTGRVEDPIVGKAEKRATLIALRGDLGLGAAET LAVGDGANDLDMLGEAGLGVAFRAKPAVAAAARVRVEHGDLTALLYLQGYAAAEFVG >Mature_297_residues MLVAILIANPDRPSITDAVLAETRAVLRTEHQPRILHGEVAAELLVPGEPAAAASLTDRLRTALAGEPIDLAVLPADAHR RKRLFLADMDSTMIEQECIDELAGTLGLKDRVAAITERAMRGEIAFEPALRERVALLKDIPVGAVDGLIAEHLTLTPGGR TLVRTMRAHGAHTCLVSGGFTLFTGPIAAMIGFDEHRSNVLGVADGRLTGRVEDPIVGKAEKRATLIALRGDLGLGAAET LAVGDGANDLDMLGEAGLGVAFRAKPAVAAAARVRVEHGDLTALLYLQGYAAAEFVG
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Homo sapiens, GI46249388, Length=181, Percent_Identity=32.0441988950276, Blast_Score=72, Evalue=6e-13, Organism=Escherichia coli, GI1790849, Length=235, Percent_Identity=41.7021276595745, Blast_Score=143, Evalue=2e-35, Organism=Caenorhabditis elegans, GI115534454, Length=171, Percent_Identity=32.1637426900585, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI115534456, Length=171, Percent_Identity=32.1637426900585, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI115534458, Length=173, Percent_Identity=31.7919075144509, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6321647, Length=245, Percent_Identity=36.3265306122449, Blast_Score=155, Evalue=8e-39, Organism=Drosophila melanogaster, GI24661601, Length=196, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF01842 ACT; PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 31184; Mature: 31184
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVAILIANPDRPSITDAVLAETRAVLRTEHQPRILHGEVAAELLVPGEPAAAASLTDRL CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHEEECCCCCHHHHHHHHHH RTALAGEPIDLAVLPADAHRRKRLFLADMDSTMIEQECIDELAGTLGLKDRVAAITERAM HHHHCCCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RGEIAFEPALRERVALLKDIPVGAVDGLIAEHLTLTPGGRTLVRTMRAHGAHTCLVSGGF CCCCEECHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCCHHHHHHHHHCCCEEEEEECCC TLFTGPIAAMIGFDEHRSNVLGVADGRLTGRVEDPIVGKAEKRATLIALRGDLGLGAAET EEEHHHHHHHHCCHHHCCCEEEEECCCEECCCCCCCCCCCCCCEEEEEEECCCCCCCHHE LAVGDGANDLDMLGEAGLGVAFRAKPAVAAAARVRVEHGDLTALLYLQGYAAAEFVG EEECCCCCHHHHHCCCCCCEEEECCCHHHHHHEEEEECCCEEEEEEEECCCHHHCCC >Mature Secondary Structure MLVAILIANPDRPSITDAVLAETRAVLRTEHQPRILHGEVAAELLVPGEPAAAASLTDRL CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHEEECCCCCHHHHHHHHHH RTALAGEPIDLAVLPADAHRRKRLFLADMDSTMIEQECIDELAGTLGLKDRVAAITERAM HHHHCCCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RGEIAFEPALRERVALLKDIPVGAVDGLIAEHLTLTPGGRTLVRTMRAHGAHTCLVSGGF CCCCEECHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCCHHHHHHHHHCCCEEEEEECCC TLFTGPIAAMIGFDEHRSNVLGVADGRLTGRVEDPIVGKAEKRATLIALRGDLGLGAAET EEEHHHHHHHHCCHHHCCCEEEEECCCEECCCCCCCCCCCCCCEEEEEEECCCCCCCHHE LAVGDGANDLDMLGEAGLGVAFRAKPAVAAAARVRVEHGDLTALLYLQGYAAAEFVG EEECCCCCHHHHHCCCCCCEEEECCCHHHHHHEEEEECCCEEEEEEEECCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]