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The map label for this gene is yliC [C]

Identifier: 170750864

GI number: 170750864

Start: 4755655

End: 4756635

Strand: Direct

Name: yliC [C]

Synonym: Mrad2831_4475

Alternate gene names: 170750864

Gene position: 4755655-4756635 (Clockwise)

Preceding gene: 170750863

Following gene: 170750865

Centisome position: 78.25

GC content: 68.6

Gene sequence:

>981_bases
GTGCTCGCCTTCCTGCTGCGCCGGGTGATCCAGGCGGCCGCGGTCCTCGCGGTCGTCGGGCTCATCGCCTTCGCGATGTT
CCGGTTCGCGGGCGATCCCGTGAACCAGATCGTCGGCCCCGACACCACCGTGGCCGAGCGGGCCCAGATCCGGACGGATC
TGGGCCTCGACGATCCGGTGCTGGTCCAGTTCGTCCGCTATGCCGGCAACGTGGTGCGGGGCCAGTTCGGCATCTCGTAC
CAGTTCCGGCAGCCGGTCTCGCAGCTCTTGGCCGAGCGCATGCCGGCGACGCTGGAGCTCGCCTTCTGCGCCACGATCTT
CGCCCTGGTGGTGGGGATCCTGATGGGCGTGTACTGCGCGCTCTTCCGCGAGTCCTGGCTCGCCGGGCTGTTCCAGGCGG
TCTCGCTGATCGGGATCAGCCTGCCGACCTTCCTGATCGGCATCCTCCTGATCTACCTGTTCTCGGTGACGCTCGGCTGG
CTGCCCTCCTACGGGCGGGGCGACACGGTCCGGCTCGGCTGGTGGACCACCGGCTTCCTCACCGCCTCCGGGCTCAAGGC
GCTGATCCTGCCCTCGGTGACGCTCGGCCTGTTCCAGATGACGCTGATCATGCGGCTCGTGCGCGCCGAGATGCTGGAGG
TCCTGCGCACCGACTACATCCGCTTCGCCCGGGCGCGGGGGCTCACCACCCGGGCCGTCCACCTGCGGCACGCCCTGAAG
AACACCCTGGTGCCGGTGATCACCATCGCGGGCCTCCAGCTCGGCTCGGTGATCGCCTTCTCGATCATCACCGAGACGGT
GTTCCAGTGGCCCGGCATGGGCCTGCTCTTCGTCCAGGCCGTGCAGAACGTCGATATCCCGATCATGTCCGCGTACCTGC
TGCTCGTCGCGCTGATCTTCGTGACCATCAATCTCGTGGTCGACATCCTCTACACGGTGGTGGACCCGCGCCTGCGGCTG
CCCGCCGGGCGGGCGGCGTGA

Upstream 100 bases:

>100_bases
GCTCGCCTGGGGCGTCTCCAAGAAGGTCCACCTGACCCAGCGCGCCGACAACCTGCTCCTGCTCTACTGGGTGTCGAAGG
ACCCGCAGTAGGAGCGCGGC

Downstream 100 bases:

>100_bases
GGAGCGACCGATGAGCGGACGTGACATCGACGCGGGCGACGCCCCGCCGGTCCCACTGCCGGAGGCGAAGCCCTCCCGCC
TCGCGCGCTGGCGCGAGTCC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MLAFLLRRVIQAAAVLAVVGLIAFAMFRFAGDPVNQIVGPDTTVAERAQIRTDLGLDDPVLVQFVRYAGNVVRGQFGISY
QFRQPVSQLLAERMPATLELAFCATIFALVVGILMGVYCALFRESWLAGLFQAVSLIGISLPTFLIGILLIYLFSVTLGW
LPSYGRGDTVRLGWWTTGFLTASGLKALILPSVTLGLFQMTLIMRLVRAEMLEVLRTDYIRFARARGLTTRAVHLRHALK
NTLVPVITIAGLQLGSVIAFSIITETVFQWPGMGLLFVQAVQNVDIPIMSAYLLLVALIFVTINLVVDILYTVVDPRLRL
PAGRAA

Sequences:

>Translated_326_residues
MLAFLLRRVIQAAAVLAVVGLIAFAMFRFAGDPVNQIVGPDTTVAERAQIRTDLGLDDPVLVQFVRYAGNVVRGQFGISY
QFRQPVSQLLAERMPATLELAFCATIFALVVGILMGVYCALFRESWLAGLFQAVSLIGISLPTFLIGILLIYLFSVTLGW
LPSYGRGDTVRLGWWTTGFLTASGLKALILPSVTLGLFQMTLIMRLVRAEMLEVLRTDYIRFARARGLTTRAVHLRHALK
NTLVPVITIAGLQLGSVIAFSIITETVFQWPGMGLLFVQAVQNVDIPIMSAYLLLVALIFVTINLVVDILYTVVDPRLRL
PAGRAA
>Mature_326_residues
MLAFLLRRVIQAAAVLAVVGLIAFAMFRFAGDPVNQIVGPDTTVAERAQIRTDLGLDDPVLVQFVRYAGNVVRGQFGISY
QFRQPVSQLLAERMPATLELAFCATIFALVVGILMGVYCALFRESWLAGLFQAVSLIGISLPTFLIGILLIYLFSVTLGW
LPSYGRGDTVRLGWWTTGFLTASGLKALILPSVTLGLFQMTLIMRLVRAEMLEVLRTDYIRFARARGLTTRAVHLRHALK
NTLVPVITIAGLQLGSVIAFSIITETVFQWPGMGLLFVQAVQNVDIPIMSAYLLLVALIFVTINLVVDILYTVVDPRLRL
PAGRAA

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=320, Percent_Identity=37.8125, Blast_Score=224, Evalue=9e-60,
Organism=Escherichia coli, GI1789965, Length=336, Percent_Identity=41.0714285714286, Blast_Score=216, Evalue=2e-57,
Organism=Escherichia coli, GI1789888, Length=330, Percent_Identity=33.3333333333333, Blast_Score=184, Evalue=5e-48,
Organism=Escherichia coli, GI1787497, Length=321, Percent_Identity=33.9563862928349, Blast_Score=182, Evalue=2e-47,
Organism=Escherichia coli, GI1787761, Length=341, Percent_Identity=38.41642228739, Blast_Score=165, Evalue=4e-42,
Organism=Escherichia coli, GI1787550, Length=268, Percent_Identity=33.955223880597, Blast_Score=159, Evalue=3e-40,
Organism=Escherichia coli, GI1788504, Length=280, Percent_Identity=28.2142857142857, Blast_Score=96, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35784; Mature: 35784

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAFLLRRVIQAAAVLAVVGLIAFAMFRFAGDPVNQIVGPDTTVAERAQIRTDLGLDDPV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHCCCCCCHH
LVQFVRYAGNVVRGQFGISYQFRQPVSQLLAERMPATLELAFCATIFALVVGILMGVYCA
HHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LFRESWLAGLFQAVSLIGISLPTFLIGILLIYLFSVTLGWLPSYGRGDTVRLGWWTTGFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHH
TASGLKALILPSVTLGLFQMTLIMRLVRAEMLEVLRTDYIRFARARGLTTRAVHLRHALK
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
NTLVPVITIAGLQLGSVIAFSIITETVFQWPGMGLLFVQAVQNVDIPIMSAYLLLVALIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
VTINLVVDILYTVVDPRLRLPAGRAA
HHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLAFLLRRVIQAAAVLAVVGLIAFAMFRFAGDPVNQIVGPDTTVAERAQIRTDLGLDDPV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHCCCCCCHH
LVQFVRYAGNVVRGQFGISYQFRQPVSQLLAERMPATLELAFCATIFALVVGILMGVYCA
HHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LFRESWLAGLFQAVSLIGISLPTFLIGILLIYLFSVTLGWLPSYGRGDTVRLGWWTTGFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHH
TASGLKALILPSVTLGLFQMTLIMRLVRAEMLEVLRTDYIRFARARGLTTRAVHLRHALK
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
NTLVPVITIAGLQLGSVIAFSIITETVFQWPGMGLLFVQAVQNVDIPIMSAYLLLVALIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
VTINLVVDILYTVVDPRLRLPAGRAA
HHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]